RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 SPSB3Q6PJ21 355 aa15.32■□□□□ 0.04
SHKBP1-222ENST00000600320 STX12Q86Y82 276 aa15.32■□□□□ 0.04
SHKBP1-222ENST00000600320 SLC25A31Q9H0C2 315 aa15.32■□□□□ 0.04
SHKBP1-222ENST00000600320 ANK2Q01484 3957 aa15.31■□□□□ 0.04
SHKBP1-222ENST00000600320 WNK1Q9H4A3 2382 aa15.31■□□□□ 0.04
SHKBP1-222ENST00000600320 RPL12P30050 165 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-222ENST00000600320 OR10J1P30954 320 aa15.31■□□□□ 0.04
SHKBP1-222ENST00000600320 SYNJ2BPP57105 145 aa15.31■□□□□ 0.04
SHKBP1-222ENST00000600320 IGKV1OR2-108A0A075B7D4 117 aa15.3■□□□□ 0.04
SHKBP1-222ENST00000600320 FXYD6-FXYD2A0A087WZ82 144 aa15.3■□□□□ 0.04
SHKBP1-222ENST00000600320 SMCO3A2RU48 225 aa15.3■□□□□ 0.04
SHKBP1-222ENST00000600320 UNQ9165/PRO28630Q6UXU0 137 aa15.3■□□□□ 0.04
SHKBP1-222ENST00000600320 GPHB5Q86YW7 130 aa15.3■□□□□ 0.04
SHKBP1-222ENST00000600320 THAP8Q8NA92 274 aa15.3■□□□□ 0.04
SHKBP1-222ENST00000600320 OR1S2Q8NGQ3 325 aa15.3■□□□□ 0.04
SHKBP1-222ENST00000600320 HSPB11Q9Y547 144 aa15.3■□□□□ 0.04
SHKBP1-222ENST00000600320 TRAV30A0A087WSZ9 112 aa15.29■□□□□ 0.04
SHKBP1-222ENST00000600320 AKR1C1Q04828 323 aa15.29■□□□□ 0.04
SHKBP1-222ENST00000600320 PRR31Q5SQ13 230 aa15.29■□□□□ 0.04
SHKBP1-222ENST00000600320 TMEM144Q7Z5S9 345 aa15.29■□□□□ 0.04
SHKBP1-222ENST00000600320 C1QL4Q86Z23 238 aa15.29■□□□□ 0.04
SHKBP1-222ENST00000600320 FNDC10F2Z333 226 aa15.28■□□□□ 0.04
SHKBP1-222ENST00000600320 OVOL1O14753 267 aa15.28■□□□□ 0.04
SHKBP1-222ENST00000600320 SCAF4O95104 1147 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-222ENST00000600320 S100A11P31949 105 aa15.28■□□□□ 0.04
SHKBP1-222ENST00000600320 BAXQ07812 192 aa15.28■□□□□ 0.04
SHKBP1-222ENST00000600320 VWC2Q2TAL6 325 aa15.28■□□□□ 0.04
SHKBP1-222ENST00000600320 WFDC9Q8NEX5 89 aa15.28■□□□□ 0.04
SHKBP1-222ENST00000600320 OR11H4Q8NGC9 324 aa15.28■□□□□ 0.04
SHKBP1-222ENST00000600320 OR5C1Q8NGR4 320 aa15.28■□□□□ 0.04
SHKBP1-222ENST00000600320 RCC1LQ96I51 464 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-222ENST00000600320 TMEM147Q9BVK8 224 aa15.28■□□□□ 0.04
SHKBP1-222ENST00000600320 GGACTQ9BVM4 153 aa15.28■□□□□ 0.04
SHKBP1-222ENST00000600320 IGHV3OR16-8A0A075B7F1 116 aa15.27■□□□□ 0.04
SHKBP1-222ENST00000600320 ZFP92A6NM28 416 aa15.27■□□□□ 0.04
SHKBP1-222ENST00000600320 EDN2P20800 178 aa15.27■□□□□ 0.04
SHKBP1-222ENST00000600320 HBG1P69891 147 aa15.27■□□□□ 0.04
SHKBP1-222ENST00000600320 HBG2P69892 147 aa15.27■□□□□ 0.04
SHKBP1-222ENST00000600320 ZNF90Q03938 601 aa15.27■□□□□ 0.04
SHKBP1-222ENST00000600320 RELQ04864 619 aaPredicted RBP15.27■□□□□ 0.04
SHKBP1-222ENST00000600320 CD300CQ08708 224 aa15.27■□□□□ 0.04
SHKBP1-222ENST00000600320 TREML4Q6UXN2 200 aa15.27■□□□□ 0.04
SHKBP1-222ENST00000600320 ZNF600Q6ZNG1 722 aa15.27■□□□□ 0.04
SHKBP1-222ENST00000600320 REC114Q7Z4M0 266 aa15.27■□□□□ 0.04
SHKBP1-222ENST00000600320 LILRB2Q8N423 598 aa15.27■□□□□ 0.04
SHKBP1-222ENST00000600320 TMEM190Q8WZ59 177 aa15.27■□□□□ 0.04
SHKBP1-222ENST00000600320 AQP10Q96PS8 301 aa15.27■□□□□ 0.04
SHKBP1-222ENST00000600320 TRGV9Q99603 122 aa15.27■□□□□ 0.04
SHKBP1-222ENST00000600320 NPVFQ9HCQ7 196 aa15.27■□□□□ 0.04
SHKBP1-222ENST00000600320 TNFSF18Q9UNG2 199 aa15.27■□□□□ 0.04
SHKBP1-222ENST00000600320 RNF222A6NCQ9 220 aa15.26■□□□□ 0.03
SHKBP1-222ENST00000600320 NDUFA4O00483 81 aa15.26■□□□□ 0.03
SHKBP1-222ENST00000600320 YPEL3P61236 119 aaPredicted RBP15.26■□□□□ 0.03
SHKBP1-222ENST00000600320 CLINT1Q14677 625 aa15.26■□□□□ 0.03
SHKBP1-222ENST00000600320 TOMM20LQ6UXN7 152 aa15.26■□□□□ 0.03
SHKBP1-222ENST00000600320 ZNF546Q86UE3 836 aa15.26■□□□□ 0.03
SHKBP1-222ENST00000600320 AKAP14Q86UN6 197 aa15.26■□□□□ 0.03
SHKBP1-222ENST00000600320 TCTE3Q8IZS6 198 aa15.26■□□□□ 0.03
SHKBP1-222ENST00000600320 SMIM3Q9BZL3 60 aa15.26■□□□□ 0.03
SHKBP1-222ENST00000600320 ZFAND3Q9H8U3 227 aa15.26■□□□□ 0.03
SHKBP1-222ENST00000600320 UQCC1Q9NVA1 299 aa15.26■□□□□ 0.03
SHKBP1-222ENST00000600320 PUS1Q9Y606 427 aaKnown RBP eCLIP15.26■□□□□ 0.03
SHKBP1-222ENST00000600320 UBE2L5PA0A1B0GUS4 154 aa15.25■□□□□ 0.03
SHKBP1-222ENST00000600320 ZNF320A2RRD8 509 aa15.25■□□□□ 0.03
SHKBP1-222ENST00000600320 LGALS9O00182 355 aa15.25■□□□□ 0.03
SHKBP1-222ENST00000600320 TOMM40O96008 361 aa15.25■□□□□ 0.03
SHKBP1-222ENST00000600320 CD33P20138 364 aa15.25■□□□□ 0.03
SHKBP1-222ENST00000600320 OR2F1Q13607 317 aa15.25■□□□□ 0.03
SHKBP1-222ENST00000600320 ATP6V1FQ16864 119 aa15.25■□□□□ 0.03
SHKBP1-222ENST00000600320 FAM106AQ4KMX7 169 aa15.25■□□□□ 0.03
SHKBP1-222ENST00000600320 IL34Q6ZMJ4 242 aa15.25■□□□□ 0.03
SHKBP1-222ENST00000600320 TMEM182Q6ZP80 229 aaPredicted RBP15.25■□□□□ 0.03
SHKBP1-222ENST00000600320 OR9G4Q8NGQ1 327 aa15.25■□□□□ 0.03
SHKBP1-222ENST00000600320 WFDC1Q9HC57 220 aa15.25■□□□□ 0.03
SHKBP1-222ENST00000600320 WDR83OSQ9Y284 106 aa15.25■□□□□ 0.03
SHKBP1-222ENST00000600320 LSM4Q9Y4Z0 139 aaKnown RBP15.25■□□□□ 0.03
SHKBP1-222ENST00000600320 ARPC5O15511 151 aa15.24■□□□□ 0.03
SHKBP1-222ENST00000600320 ZNF207O43670 478 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-222ENST00000600320 SCGB2A1O75556 95 aa15.24■□□□□ 0.03
SHKBP1-222ENST00000600320 YIF1AO95070 293 aa15.24■□□□□ 0.03
SHKBP1-222ENST00000600320 PSG1P11464 419 aa15.24■□□□□ 0.03
SHKBP1-222ENST00000600320 TM4SF20Q53R12 229 aa15.24■□□□□ 0.03
SHKBP1-222ENST00000600320 C20orf24Q9BUV8 137 aa15.24■□□□□ 0.03
SHKBP1-222ENST00000600320 NBEAL1Q6ZS30 2694 aa15.24■□□□□ 0.03
SHKBP1-222ENST00000600320 TMEM213A2RRL7 107 aa15.23■□□□□ 0.03
SHKBP1-222ENST00000600320 GATA2P23769 480 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-222ENST00000600320 ADAMTSL5Q6ZMM2 481 aa15.23■□□□□ 0.03
SHKBP1-222ENST00000600320 Q8WTZ3 238 aa15.23■□□□□ 0.03
SHKBP1-222ENST00000600320 MGST2Q99735 147 aa15.23■□□□□ 0.03
SHKBP1-222ENST00000600320 FBXL17Q9UF56 701 aa15.23■□□□□ 0.03
SHKBP1-222ENST00000600320 TRRAPQ9Y4A5 3859 aa15.22■□□□□ 0.03
SHKBP1-222ENST00000600320 C2orf70A6NJV1 201 aa15.22■□□□□ 0.03
SHKBP1-222ENST00000600320 A8MWP6 167 aa15.22■□□□□ 0.03
SHKBP1-222ENST00000600320 CSN3P07498 182 aa15.22■□□□□ 0.03
SHKBP1-222ENST00000600320 RD3LP0DJH9 198 aa15.22■□□□□ 0.03
SHKBP1-222ENST00000600320 IGLL1P15814 213 aa15.22■□□□□ 0.03
SHKBP1-222ENST00000600320 NUP62P37198 522 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-222ENST00000600320 TEPPQ6URK8 271 aa15.22■□□□□ 0.03
SHKBP1-222ENST00000600320 CYP2G1PQ6ZSU1 146 aa15.22■□□□□ 0.03
SHKBP1-222ENST00000600320 INO80EQ8NBZ0 244 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms