RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 IGHV3-74A0A0B4J1X5 117 aa11.44□□□□□ -0.58
LIG1-219ENST00000600055 H3BP45 60 aa11.44□□□□□ -0.58
LIG1-219ENST00000600055 SCGB1D2O95969 90 aa11.44□□□□□ -0.58
LIG1-219ENST00000600055 IGLC1P0CG04 106 aa11.44□□□□□ -0.58
LIG1-219ENST00000600055 NKX2-1P43699 371 aaPredicted RBP11.44□□□□□ -0.58
LIG1-219ENST00000600055 ETFRF1Q6IPR1 90 aa11.44□□□□□ -0.58
LIG1-219ENST00000600055 C12orf45Q8N5I9 185 aaPredicted RBP11.44□□□□□ -0.58
LIG1-219ENST00000600055 ZBTB8BQ8NAP8 495 aaPredicted RBP11.44□□□□□ -0.58
LIG1-219ENST00000600055 TMEM116Q8NCL8 245 aa11.44□□□□□ -0.58
LIG1-219ENST00000600055 ASCL2Q99929 193 aa11.44□□□□□ -0.58
LIG1-219ENST00000600055 GSKIPQ9P0R6 139 aa11.44□□□□□ -0.58
LIG1-219ENST00000600055 SMPXQ9UHP9 88 aa11.44□□□□□ -0.58
LIG1-219ENST00000600055 SORL1Q92673 2214 aa11.43□□□□□ -0.58
LIG1-219ENST00000600055 IGHV7-4-1A0A0J9YVY3 117 aa11.43□□□□□ -0.58
LIG1-219ENST00000600055 FAM25EA8MYX2 175 aa11.43□□□□□ -0.58
LIG1-219ENST00000600055 SSSCA1O60232 199 aa11.43□□□□□ -0.58
LIG1-219ENST00000600055 CD7P09564 240 aa11.43□□□□□ -0.58
LIG1-219ENST00000600055 OR10J1P30954 320 aa11.43□□□□□ -0.58
LIG1-219ENST00000600055 ATP5IP56385 69 aaPredicted RBP11.43□□□□□ -0.58
LIG1-219ENST00000600055 SPANXN5Q5MJ07 72 aa11.43□□□□□ -0.58
LIG1-219ENST00000600055 GTSCR1Q86UQ5 136 aa11.43□□□□□ -0.58
LIG1-219ENST00000600055 OR1S2Q8NGQ3 325 aa11.43□□□□□ -0.58
LIG1-219ENST00000600055 CIB3Q96Q77 187 aaPredicted RBP11.43□□□□□ -0.58
LIG1-219ENST00000600055 TRAV30A0A087WSZ9 112 aa11.42□□□□□ -0.58
LIG1-219ENST00000600055 TRAV14DV4A0A0A6YYC5 116 aa11.42□□□□□ -0.58
LIG1-219ENST00000600055 SNRPGP15A8MWD9 76 aa11.42□□□□□ -0.58
LIG1-219ENST00000600055 CHEK1O14757 476 aa11.42□□□□□ -0.58
LIG1-219ENST00000600055 APOHP02749 345 aaPredicted RBP11.42□□□□□ -0.58
LIG1-219ENST00000600055 FRMD6-AS1P0C7T7 363 aa11.42□□□□□ -0.58
LIG1-219ENST00000600055 IGHV4-30-4P0DP06 118 aa11.42□□□□□ -0.58
LIG1-219ENST00000600055 CD81P60033 236 aa11.42□□□□□ -0.58
LIG1-219ENST00000600055 RAB11AP62491 216 aa11.42□□□□□ -0.58
LIG1-219ENST00000600055 GAMTQ14353 236 aa11.42□□□□□ -0.58
LIG1-219ENST00000600055 RBPMS2Q6ZRY4 209 aaKnown RBP11.42□□□□□ -0.58
LIG1-219ENST00000600055 NEURL2Q9BR09 285 aa11.42□□□□□ -0.58
LIG1-219ENST00000600055 RHPN1-AS1Q9BWJ2 59 aa11.42□□□□□ -0.58
LIG1-219ENST00000600055 IGHV3-66A0A0C4DH42 116 aa11.41□□□□□ -0.58
LIG1-219ENST00000600055 C5orf51A6NDU8 294 aa11.41□□□□□ -0.58
LIG1-219ENST00000600055 PRSS46E5RG02 174 aa11.41□□□□□ -0.58
LIG1-219ENST00000600055 SCGB2A1O75556 95 aa11.41□□□□□ -0.58
LIG1-219ENST00000600055 GPX4P36969 197 aaPredicted RBP11.41□□□□□ -0.58
LIG1-219ENST00000600055 PAX9P55771 341 aa11.41□□□□□ -0.58
LIG1-219ENST00000600055 RPP30P78346 268 aaKnown RBP11.41□□□□□ -0.58
LIG1-219ENST00000600055 OXA1LQ15070 435 aa11.41□□□□□ -0.58
LIG1-219ENST00000600055 LILRB2Q8N423 598 aa11.41□□□□□ -0.58
LIG1-219ENST00000600055 SLC35E1Q96K37 410 aa11.41□□□□□ -0.58
LIG1-219ENST00000600055 RNF2Q99496 336 aa11.41□□□□□ -0.58
LIG1-219ENST00000600055 GINS3Q9BRX5 216 aa11.41□□□□□ -0.58
LIG1-219ENST00000600055 WFDC10AQ9H1F0 79 aa11.41□□□□□ -0.58
LIG1-219ENST00000600055 PSENENQ9NZ42 101 aa11.41□□□□□ -0.58
LIG1-219ENST00000600055 STRAPQ9Y3F4 350 aaKnown RBP11.41□□□□□ -0.58
LIG1-219ENST00000600055 TGP01266 2768 aa11.4□□□□□ -0.58
LIG1-219ENST00000600055 TRAV25A0A0B4J276 109 aa11.4□□□□□ -0.58
LIG1-219ENST00000600055 MBPP02686 304 aaPredicted RBP11.4□□□□□ -0.58
LIG1-219ENST00000600055 YPEL3P61236 119 aaPredicted RBP11.4□□□□□ -0.58
LIG1-219ENST00000600055 SBSPONQ8IVN8 264 aa11.4□□□□□ -0.58
LIG1-219ENST00000600055 ST8SIA2Q92186 375 aa11.4□□□□□ -0.58
LIG1-219ENST00000600055 C19orf73Q9NVV2 129 aa11.4□□□□□ -0.58
LIG1-219ENST00000600055 RCL1Q9Y2P8 373 aaKnown RBP11.4□□□□□ -0.58
LIG1-219ENST00000600055 IGKV1D-37A0A075B6S9 117 aa11.39□□□□□ -0.59
LIG1-219ENST00000600055 TSPAN4O14817 238 aa11.39□□□□□ -0.59
LIG1-219ENST00000600055 CCNKO75909 580 aa11.39□□□□□ -0.59
LIG1-219ENST00000600055 LAMTOR1Q6IAA8 161 aa11.39□□□□□ -0.59
LIG1-219ENST00000600055 DEFB125Q8N687 156 aa11.39□□□□□ -0.59
LIG1-219ENST00000600055 Q8WTZ3 238 aa11.39□□□□□ -0.59
LIG1-219ENST00000600055 SMIM8Q96KF7 97 aa11.39□□□□□ -0.59
LIG1-219ENST00000600055 VSIRQ9H7M9 311 aa11.39□□□□□ -0.59
LIG1-219ENST00000600055 DNAH9Q9NYC9 4486 aa11.38□□□□□ -0.59
LIG1-219ENST00000600055 IGKV3-7A0A075B6H7 116 aa11.38□□□□□ -0.59
LIG1-219ENST00000600055 ZFP92A6NM28 416 aa11.38□□□□□ -0.59
LIG1-219ENST00000600055 A8MZ25 164 aa11.38□□□□□ -0.59
LIG1-219ENST00000600055 TOMM40O96008 361 aa11.38□□□□□ -0.59
LIG1-219ENST00000600055 RD3LP0DJH9 198 aa11.38□□□□□ -0.59
LIG1-219ENST00000600055 PSG1P11464 419 aa11.38□□□□□ -0.59
LIG1-219ENST00000600055 NPPCP23582 126 aa11.38□□□□□ -0.59
LIG1-219ENST00000600055 ZNF90Q03938 601 aa11.38□□□□□ -0.59
LIG1-219ENST00000600055 GSG1LQ6UXU4 331 aa11.38□□□□□ -0.59
LIG1-219ENST00000600055 C2orf50Q96LR7 162 aa11.38□□□□□ -0.59
LIG1-219ENST00000600055 SPAG8Q99932 426 aaPredicted RBP11.38□□□□□ -0.59
LIG1-219ENST00000600055 TUBA4BQ9H853 241 aa11.38□□□□□ -0.59
LIG1-219ENST00000600055 LSM5Q9Y4Y9 91 aaKnown RBP11.38□□□□□ -0.59
LIG1-219ENST00000600055 IGKV1OR2-108A0A075B7D4 117 aa11.37□□□□□ -0.59
LIG1-219ENST00000600055 PMS2P5A8MQ11 134 aa11.37□□□□□ -0.59
LIG1-219ENST00000600055 OR11H12B2RN74 326 aa11.37□□□□□ -0.59
LIG1-219ENST00000600055 K7EPK0 472 aa11.37□□□□□ -0.59
LIG1-219ENST00000600055 SSNA1O43805 119 aa11.37□□□□□ -0.59
LIG1-219ENST00000600055 IL4P05112 153 aa11.37□□□□□ -0.59
LIG1-219ENST00000600055 CRYBB3P26998 211 aa11.37□□□□□ -0.59
LIG1-219ENST00000600055 USF2Q15853 346 aaPredicted RBP11.37□□□□□ -0.59
LIG1-219ENST00000600055 FAM90A2PQ658T7 463 aa11.37□□□□□ -0.59
LIG1-219ENST00000600055 OR8G2PQ6IF36 304 aa11.37□□□□□ -0.59
LIG1-219ENST00000600055 TCF24Q7RTU0 167 aa11.37□□□□□ -0.59
LIG1-219ENST00000600055 METTL26Q96S19 204 aa11.37□□□□□ -0.59
LIG1-219ENST00000600055 RAB40CQ96S21 281 aa11.37□□□□□ -0.59
LIG1-219ENST00000600055 UBQLN2Q9UHD9 624 aa11.37□□□□□ -0.59
LIG1-219ENST00000600055 C7orf66A4D0T2 115 aa11.36□□□□□ -0.59
LIG1-219ENST00000600055 DFFBO76075 338 aa11.36□□□□□ -0.59
LIG1-219ENST00000600055 SIX6O95475 246 aa11.36□□□□□ -0.59
LIG1-219ENST00000600055 METTL15P1P0C7V9 234 aa11.36□□□□□ -0.59
LIG1-219ENST00000600055 TFPI2P48307 235 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms