RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 RBMY1BA6NDE4 496 aaKnown RBP17.04■□□□□ 0.32
IRF3-220ENST00000598108 RBMY1EA6NEQ0 496 aaKnown RBP17.04■□□□□ 0.32
IRF3-220ENST00000598108 SYNGR2O43760 224 aa17.04■□□□□ 0.32
IRF3-220ENST00000598108 RBMY1DP0C7P1 496 aaKnown RBP17.04■□□□□ 0.32
IRF3-220ENST00000598108 OR10J1P30954 320 aa17.04■□□□□ 0.32
IRF3-220ENST00000598108 ATP5IP56385 69 aaPredicted RBP17.04■□□□□ 0.32
IRF3-220ENST00000598108 HAGHQ16775 308 aa17.04■□□□□ 0.32
IRF3-220ENST00000598108 LINC00322Q6ZN03 302 aaPredicted RBP17.04■□□□□ 0.32
IRF3-220ENST00000598108 SLC16A13Q7RTY0 426 aa17.04■□□□□ 0.32
IRF3-220ENST00000598108 MITD1Q8WV92 249 aa17.04■□□□□ 0.32
IRF3-220ENST00000598108 ACY3Q96HD9 319 aa17.04■□□□□ 0.32
IRF3-220ENST00000598108 SPAG8Q99932 426 aaPredicted RBP17.04■□□□□ 0.32
IRF3-220ENST00000598108 BATF3Q9NR55 127 aa17.04■□□□□ 0.32
IRF3-220ENST00000598108 MED6O75586 246 aa17.03■□□□□ 0.32
IRF3-220ENST00000598108 IFITM3Q01628 133 aa17.03■□□□□ 0.32
IRF3-220ENST00000598108 ID3Q02535 119 aa17.03■□□□□ 0.32
IRF3-220ENST00000598108 FAM90A2PQ658T7 463 aa17.03■□□□□ 0.32
IRF3-220ENST00000598108 LAMTOR1Q6IAA8 161 aa17.03■□□□□ 0.32
IRF3-220ENST00000598108 ETFRF1Q6IPR1 90 aa17.03■□□□□ 0.32
IRF3-220ENST00000598108 OR1S2Q8NGQ3 325 aa17.03■□□□□ 0.32
IRF3-220ENST00000598108 ST8SIA2Q92186 375 aa17.03■□□□□ 0.32
IRF3-220ENST00000598108 TM2D3Q9BRN9 247 aa17.03■□□□□ 0.32
IRF3-220ENST00000598108 GINS3Q9BRX5 216 aa17.03■□□□□ 0.32
IRF3-220ENST00000598108 NUDT15Q9NV35 164 aa17.03■□□□□ 0.32
IRF3-220ENST00000598108 IGHV3-66A0A0C4DH42 116 aa17.02■□□□□ 0.32
IRF3-220ENST00000598108 WRBO00258 174 aa17.02■□□□□ 0.32
IRF3-220ENST00000598108 IFNA21P01568 189 aa17.02■□□□□ 0.32
IRF3-220ENST00000598108 ZNF846Q147U1 533 aa17.02■□□□□ 0.32
IRF3-220ENST00000598108 OR4D5Q8NGN0 318 aa17.02■□□□□ 0.32
IRF3-220ENST00000598108 WDR12Q9GZL7 423 aaKnown RBP17.02■□□□□ 0.32
IRF3-220ENST00000598108 VSIRQ9H7M9 311 aa17.02■□□□□ 0.32
IRF3-220ENST00000598108 SRD5A3Q9H8P0 318 aa17.02■□□□□ 0.32
IRF3-220ENST00000598108 UPK1BO75841 260 aa17.01■□□□□ 0.31
IRF3-220ENST00000598108 GPX4P36969 197 aaPredicted RBP17.01■□□□□ 0.31
IRF3-220ENST00000598108 YPEL3P61236 119 aaPredicted RBP17.01■□□□□ 0.31
IRF3-220ENST00000598108 POLR2GP62487 172 aaKnown RBP eCLIP17.01■□□□□ 0.31
IRF3-220ENST00000598108 ASAH1Q13510 395 aa17.01■□□□□ 0.31
IRF3-220ENST00000598108 GAMTQ14353 236 aa17.01■□□□□ 0.31
IRF3-220ENST00000598108 SEC22CQ9BRL7 303 aa17.01■□□□□ 0.31
IRF3-220ENST00000598108 PAIP2BQ9ULR5 123 aaKnown RBP17.01■□□□□ 0.31
IRF3-220ENST00000598108 FAM240BA0A1B0GVZ2 78 aa17■□□□□ 0.31
IRF3-220ENST00000598108 SCGB2A1O75556 95 aa17■□□□□ 0.31
IRF3-220ENST00000598108 NPPCP23582 126 aa17■□□□□ 0.31
IRF3-220ENST00000598108 RCHY1Q96PM5 261 aa17■□□□□ 0.31
IRF3-220ENST00000598108 CIB3Q96Q77 187 aaPredicted RBP17■□□□□ 0.31
IRF3-220ENST00000598108 CITED4Q96RK1 184 aa17■□□□□ 0.31
IRF3-220ENST00000598108 UBQLN2Q9UHD9 624 aa17■□□□□ 0.31
IRF3-220ENST00000598108 IGKV3-7A0A075B6H7 116 aa16.99■□□□□ 0.31
IRF3-220ENST00000598108 H2AFB2P0C5Z0 115 aa16.99■□□□□ 0.31
IRF3-220ENST00000598108 CRYBB3P26998 211 aa16.99■□□□□ 0.31
IRF3-220ENST00000598108 MZT2BQ6NZ67 158 aa16.99■□□□□ 0.31
IRF3-220ENST00000598108 Q8WTZ3 238 aa16.99■□□□□ 0.31
IRF3-220ENST00000598108 IGKV1D-37A0A075B6S9 117 aa16.98■□□□□ 0.31
IRF3-220ENST00000598108 DFFBO76075 338 aa16.98■□□□□ 0.31
IRF3-220ENST00000598108 NKX2-1P43699 371 aaPredicted RBP16.98■□□□□ 0.31
IRF3-220ENST00000598108 RAB11AP62491 216 aa16.98■□□□□ 0.31
IRF3-220ENST00000598108 IAH1Q2TAA2 248 aaPredicted RBP16.98■□□□□ 0.31
IRF3-220ENST00000598108 ODF3L2Q3SX64 289 aa16.98■□□□□ 0.31
IRF3-220ENST00000598108 SPANXN5Q5MJ07 72 aa16.98■□□□□ 0.31
IRF3-220ENST00000598108 TCF24Q7RTU0 167 aa16.98■□□□□ 0.31
IRF3-220ENST00000598108 GBGT1Q8N5D6 347 aa16.98■□□□□ 0.31
IRF3-220ENST00000598108 ZNF431Q8TF32 576 aaPredicted RBP16.98■□□□□ 0.31
IRF3-220ENST00000598108 METTL26Q96S19 204 aa16.98■□□□□ 0.31
IRF3-220ENST00000598108 ZMAT4Q9H898 229 aa16.98■□□□□ 0.31
IRF3-220ENST00000598108 STAB2Q8WWQ8 2551 aa16.97■□□□□ 0.31
IRF3-220ENST00000598108 PRSS46E5RG02 174 aa16.97■□□□□ 0.31
IRF3-220ENST00000598108 H3BP45 60 aa16.97■□□□□ 0.31
IRF3-220ENST00000598108 RD3LP0DJH9 198 aa16.97■□□□□ 0.31
IRF3-220ENST00000598108 TFPI2P48307 235 aa16.97■□□□□ 0.31
IRF3-220ENST00000598108 WWC2-AS2Q96NR7 200 aa16.97■□□□□ 0.31
IRF3-220ENST00000598108 OR4C46A6NHA9 309 aa16.96■□□□□ 0.31
IRF3-220ENST00000598108 CCSO14618 274 aa16.96■□□□□ 0.31
IRF3-220ENST00000598108 TOMM40O96008 361 aa16.96■□□□□ 0.31
IRF3-220ENST00000598108 RPP30P78346 268 aaKnown RBP16.96■□□□□ 0.31
IRF3-220ENST00000598108 ZBTB8BQ8NAP8 495 aaPredicted RBP16.96■□□□□ 0.31
IRF3-220ENST00000598108 SLC35E1Q96K37 410 aa16.96■□□□□ 0.31
IRF3-220ENST00000598108 GSKIPQ9P0R6 139 aa16.96■□□□□ 0.31
IRF3-220ENST00000598108 U3KQE9 123 aa16.96■□□□□ 0.31
IRF3-220ENST00000598108 TENM3Q9P273 2699 aa16.96■□□□□ 0.31
IRF3-220ENST00000598108 SSSCA1O60232 199 aa16.95■□□□□ 0.3
IRF3-220ENST00000598108 PSG1P11464 419 aa16.95■□□□□ 0.3
IRF3-220ENST00000598108 BMI1P35226 326 aa16.95■□□□□ 0.3
IRF3-220ENST00000598108 PAX9P55771 341 aa16.95■□□□□ 0.3
IRF3-220ENST00000598108 ZNF90Q03938 601 aa16.95■□□□□ 0.3
IRF3-220ENST00000598108 USF2Q15853 346 aaPredicted RBP16.95■□□□□ 0.3
IRF3-220ENST00000598108 STRAPQ9Y3F4 350 aaKnown RBP16.95■□□□□ 0.3
IRF3-220ENST00000598108 NBEAL2Q6ZNJ1 2754 aa16.95■□□□□ 0.3
IRF3-220ENST00000598108 IL4P05112 153 aa16.94■□□□□ 0.3
IRF3-220ENST00000598108 WFDC3Q8IUB2 231 aa16.94■□□□□ 0.3
IRF3-220ENST00000598108 SMIM8Q96KF7 97 aa16.94■□□□□ 0.3
IRF3-220ENST00000598108 RETNQ9HD89 108 aa16.94■□□□□ 0.3
IRF3-220ENST00000598108 PSENENQ9NZ42 101 aa16.94■□□□□ 0.3
IRF3-220ENST00000598108 IGKV1OR2-108A0A075B7D4 117 aa16.93■□□□□ 0.3
IRF3-220ENST00000598108 A0A1W2PS18 150 aa16.93■□□□□ 0.3
IRF3-220ENST00000598108 ZFP92A6NM28 416 aa16.93■□□□□ 0.3
IRF3-220ENST00000598108 SCGB1D2O95969 90 aa16.93■□□□□ 0.3
IRF3-220ENST00000598108 P2RY1P47900 373 aa16.93■□□□□ 0.3
IRF3-220ENST00000598108 C12orf45Q8N5I9 185 aaPredicted RBP16.93■□□□□ 0.3
IRF3-220ENST00000598108 OR51G1Q8NGK1 321 aa16.93■□□□□ 0.3
IRF3-220ENST00000598108 SPATA25Q9BR10 227 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms