RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 SYNJ2BPP57105 145 aa17.24■□□□□ 0.35
SNRNP70-204ENST00000595231 DLK1P80370 383 aa17.24■□□□□ 0.35
SNRNP70-204ENST00000595231 NHLH2Q02577 135 aa17.24■□□□□ 0.35
SNRNP70-204ENST00000595231 TMEM217Q8N7C4 229 aa17.24■□□□□ 0.35
SNRNP70-204ENST00000595231 IGKV1OR2-108A0A075B7D4 117 aa17.23■□□□□ 0.35
SNRNP70-204ENST00000595231 EWSR1Q01844 656 aaKnown RBP eCLIP17.23■□□□□ 0.353e-24■■□□□ 13
SNRNP70-204ENST00000595231 IGKV1D-37A0A075B6S9 117 aa17.23■□□□□ 0.35
SNRNP70-204ENST00000595231 TRAV30A0A087WSZ9 112 aa17.23■□□□□ 0.35
SNRNP70-204ENST00000595231 OR10J1P30954 320 aa17.23■□□□□ 0.35
SNRNP70-204ENST00000595231 TREML4Q6UXN2 200 aa17.23■□□□□ 0.35
SNRNP70-204ENST00000595231 UNQ9165/PRO28630Q6UXU0 137 aa17.23■□□□□ 0.35
SNRNP70-204ENST00000595231 STX12Q86Y82 276 aa17.23■□□□□ 0.35
SNRNP70-204ENST00000595231 C1QL4Q86Z23 238 aa17.23■□□□□ 0.35
SNRNP70-204ENST00000595231 GGACTQ9BVM4 153 aa17.23■□□□□ 0.35
SNRNP70-204ENST00000595231 SLC25A31Q9H0C2 315 aa17.23■□□□□ 0.35
SNRNP70-204ENST00000595231 FNDC10F2Z333 226 aa17.22■□□□□ 0.35
SNRNP70-204ENST00000595231 OVOL1O14753 267 aa17.22■□□□□ 0.35
SNRNP70-204ENST00000595231 SLC38A11Q08AI6 406 aa17.22■□□□□ 0.35
SNRNP70-204ENST00000595231 TIGITQ495A1 244 aa17.22■□□□□ 0.35
SNRNP70-204ENST00000595231 SCAF4O95104 1147 aaKnown RBP17.21■□□□□ 0.35
SNRNP70-204ENST00000595231 RPL12P30050 165 aaKnown RBP17.21■□□□□ 0.35
SNRNP70-204ENST00000595231 S100A11P31949 105 aa17.21■□□□□ 0.35
SNRNP70-204ENST00000595231 RELQ04864 619 aaPredicted RBP17.21■□□□□ 0.35
SNRNP70-204ENST00000595231 FAM106AQ4KMX7 169 aa17.21■□□□□ 0.35
SNRNP70-204ENST00000595231 THAP8Q8NA92 274 aa17.21■□□□□ 0.35
SNRNP70-204ENST00000595231 OR1S2Q8NGQ3 325 aa17.21■□□□□ 0.35
SNRNP70-204ENST00000595231 SMLR1H3BR10 107 aa17.2■□□□□ 0.34
SNRNP70-204ENST00000595231 LGALS9O00182 355 aa17.2■□□□□ 0.34
SNRNP70-204ENST00000595231 NDUFA4O00483 81 aa17.2■□□□□ 0.34
SNRNP70-204ENST00000595231 CD33P20138 364 aa17.2■□□□□ 0.34
SNRNP70-204ENST00000595231 REC114Q7Z4M0 266 aa17.2■□□□□ 0.34
SNRNP70-204ENST00000595231 TMEM144Q7Z5S9 345 aa17.2■□□□□ 0.34
SNRNP70-204ENST00000595231 ST6GAL2Q96JF0 529 aa17.2■□□□□ 0.34
SNRNP70-204ENST00000595231 NPVFQ9HCQ7 196 aa17.2■□□□□ 0.34
SNRNP70-204ENST00000595231 NOTCH3Q9UM47 2321 aa17.2■□□□□ 0.34
SNRNP70-204ENST00000595231 HBG1P69891 147 aa17.2■□□□□ 0.34
SNRNP70-204ENST00000595231 HBG2P69892 147 aa17.2■□□□□ 0.34
SNRNP70-204ENST00000595231 BAXQ07812 192 aa17.2■□□□□ 0.34
SNRNP70-204ENST00000595231 IL34Q6ZMJ4 242 aa17.2■□□□□ 0.34
SNRNP70-204ENST00000595231 OR9G4Q8NGQ1 327 aa17.2■□□□□ 0.34
SNRNP70-204ENST00000595231 RCC1LQ96I51 464 aaKnown RBP17.2■□□□□ 0.34
SNRNP70-204ENST00000595231 ZNF320A2RRD8 509 aa17.19■□□□□ 0.34
SNRNP70-204ENST00000595231 SMCO3A2RU48 225 aa17.19■□□□□ 0.34
SNRNP70-204ENST00000595231 ZFP92A6NM28 416 aa17.19■□□□□ 0.34
SNRNP70-204ENST00000595231 YPEL3P61236 119 aaPredicted RBP17.19■□□□□ 0.34
SNRNP70-204ENST00000595231 AKR1C1Q04828 323 aa17.19■□□□□ 0.34
SNRNP70-204ENST00000595231 VWC2Q2TAL6 325 aa17.19■□□□□ 0.34
SNRNP70-204ENST00000595231 ZNF600Q6ZNG1 722 aa17.19■□□□□ 0.34
SNRNP70-204ENST00000595231 ZNF90Q03938 601 aa17.18■□□□□ 0.34
SNRNP70-204ENST00000595231 TOMM20LQ6UXN7 152 aa17.18■□□□□ 0.34
SNRNP70-204ENST00000595231 OR5C1Q8NGR4 320 aa17.18■□□□□ 0.34
SNRNP70-204ENST00000595231 TMEM190Q8WZ59 177 aa17.18■□□□□ 0.34
SNRNP70-204ENST00000595231 PUS1Q9Y606 427 aaKnown RBP eCLIP17.18■□□□□ 0.343e-6■■□□□ 11.9
SNRNP70-204ENST00000595231 IGHV3OR16-8A0A075B7F1 116 aa17.17■□□□□ 0.34
SNRNP70-204ENST00000595231 SCGB2A1O75556 95 aa17.17■□□□□ 0.34
SNRNP70-204ENST00000595231 TRGV9Q99603 122 aa17.17■□□□□ 0.34
SNRNP70-204ENST00000595231 ZFAND3Q9H8U3 227 aa17.17■□□□□ 0.34
SNRNP70-204ENST00000595231 LSM4Q9Y4Z0 139 aaKnown RBP17.17■□□□□ 0.34
SNRNP70-204ENST00000595231 HSPB11Q9Y547 144 aa17.17■□□□□ 0.34
SNRNP70-204ENST00000595231 A8MWP6 167 aa17.16■□□□□ 0.34
SNRNP70-204ENST00000595231 ATP6V1FQ16864 119 aa17.16■□□□□ 0.34
SNRNP70-204ENST00000595231 ZNF546Q86UE3 836 aa17.16■□□□□ 0.34
SNRNP70-204ENST00000595231 LILRB2Q8N423 598 aa17.16■□□□□ 0.34
SNRNP70-204ENST00000595231 AQP10Q96PS8 301 aa17.16■□□□□ 0.34
SNRNP70-204ENST00000595231 UQCC1Q9NVA1 299 aa17.16■□□□□ 0.34
SNRNP70-204ENST00000595231 MGAM2Q2M2H8 2515 aa17.16■□□□□ 0.34
SNRNP70-204ENST00000595231 FXYD6-FXYD2A0A087WZ82 144 aa17.16■□□□□ 0.34
SNRNP70-204ENST00000595231 TMEM213A2RRL7 107 aa17.16■□□□□ 0.34
SNRNP70-204ENST00000595231 YIF1AO95070 293 aa17.16■□□□□ 0.34
SNRNP70-204ENST00000595231 PSG1P11464 419 aa17.16■□□□□ 0.34
SNRNP70-204ENST00000595231 IGLL1P15814 213 aa17.16■□□□□ 0.34
SNRNP70-204ENST00000595231 EDN2P20800 178 aa17.16■□□□□ 0.34
SNRNP70-204ENST00000595231 TM4SF20Q53R12 229 aa17.16■□□□□ 0.34
SNRNP70-204ENST00000595231 TMEM147Q9BVK8 224 aa17.16■□□□□ 0.34
SNRNP70-204ENST00000595231 TNFSF18Q9UNG2 199 aa17.16■□□□□ 0.34
SNRNP70-204ENST00000595231 TOMM40O96008 361 aa17.15■□□□□ 0.34
SNRNP70-204ENST00000595231 CSN3P07498 182 aa17.15■□□□□ 0.34
SNRNP70-204ENST00000595231 RD3LP0DJH9 198 aa17.15■□□□□ 0.34
SNRNP70-204ENST00000595231 TEPPQ6URK8 271 aa17.15■□□□□ 0.34
SNRNP70-204ENST00000595231 ADAMTSL5Q6ZMM2 481 aa17.15■□□□□ 0.34
SNRNP70-204ENST00000595231 Q8WTZ3 238 aa17.15■□□□□ 0.34
SNRNP70-204ENST00000595231 C20orf24Q9BUV8 137 aa17.15■□□□□ 0.34
SNRNP70-204ENST00000595231 PEMTQ9UBM1 199 aa17.15■□□□□ 0.34
SNRNP70-204ENST00000595231 RNF222A6NCQ9 220 aa17.14■□□□□ 0.33
SNRNP70-204ENST00000595231 TMEM182Q6ZP80 229 aaPredicted RBP17.14■□□□□ 0.33
SNRNP70-204ENST00000595231 OR11H4Q8NGC9 324 aa17.14■□□□□ 0.33
SNRNP70-204ENST00000595231 WDR83OSQ9Y284 106 aa17.14■□□□□ 0.33
SNRNP70-204ENST00000595231 C2orf70A6NJV1 201 aa17.13■□□□□ 0.33
SNRNP70-204ENST00000595231 SEC14L6B5MCN3 397 aa17.13■□□□□ 0.33
SNRNP70-204ENST00000595231 K7EMT4 169 aa17.13■□□□□ 0.33
SNRNP70-204ENST00000595231 ELLP55199 621 aaPredicted RBP17.13■□□□□ 0.33
SNRNP70-204ENST00000595231 CLINT1Q14677 625 aa17.13■□□□□ 0.33
SNRNP70-204ENST00000595231 TCTE3Q8IZS6 198 aa17.13■□□□□ 0.33
SNRNP70-204ENST00000595231 MCRIP2Q9BUT9 160 aaKnown RBP17.13■□□□□ 0.33
SNRNP70-204ENST00000595231 DAZ1Q9NQZ3 744 aaKnown RBP17.13■□□□□ 0.33
SNRNP70-204ENST00000595231 UFC1Q9Y3C8 167 aa17.13■□□□□ 0.33
SNRNP70-204ENST00000595231 SIGLEC8Q9NYZ4 499 aa17.13■□□□□ 0.33
SNRNP70-204ENST00000595231 UBE2L5PA0A1B0GUS4 154 aa17.12■□□□□ 0.33
SNRNP70-204ENST00000595231 ZNF207O43670 478 aaKnown RBP17.12■□□□□ 0.33
SNRNP70-204ENST00000595231 CBLN1P23435 193 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms