RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 RNASE11Q8TAA1 199 aaKnown RBP10.79□□□□□ -0.68
PNKP-202ENST00000593706 TMEM170AQ8WVE7 144 aa10.79□□□□□ -0.68
PNKP-202ENST00000593706 SCGB3A2Q96PL1 93 aa10.79□□□□□ -0.68
PNKP-202ENST00000593706 SRRQ9GZT4 340 aa10.79□□□□□ -0.68
PNKP-202ENST00000593706 KIAA1109Q2LD37 5005 aa10.78□□□□□ -0.68
PNKP-202ENST00000593706 CORTO00230 105 aa10.78□□□□□ -0.68
PNKP-202ENST00000593706 CD5P06127 495 aa10.78□□□□□ -0.68
PNKP-202ENST00000593706 S100A5P33763 92 aa10.78□□□□□ -0.68
PNKP-202ENST00000593706 AP3S2P59780 193 aa10.78□□□□□ -0.68
PNKP-202ENST00000593706 RPL11P62913 178 aaKnown RBP10.78□□□□□ -0.68
PNKP-202ENST00000593706 LEMD1Q68G75 181 aa10.78□□□□□ -0.68
PNKP-202ENST00000593706 ST8SIA2Q92186 375 aa10.78□□□□□ -0.68
PNKP-202ENST00000593706 PDCD10Q9BUL8 212 aa10.78□□□□□ -0.68
PNKP-202ENST00000593706 ZFAND3Q9H8U3 227 aa10.78□□□□□ -0.68
PNKP-202ENST00000593706 A0A0B4J2A0 478 aa10.77□□□□□ -0.69
PNKP-202ENST00000593706 AKR1C4P17516 323 aa10.77□□□□□ -0.69
PNKP-202ENST00000593706 FAUP35544 74 aaKnown RBP10.77□□□□□ -0.69
PNKP-202ENST00000593706 TCTAP57738 103 aa10.77□□□□□ -0.69
PNKP-202ENST00000593706 FAM90A2PQ658T7 463 aa10.77□□□□□ -0.69
PNKP-202ENST00000593706 LYZL2Q7Z4W2 148 aa10.77□□□□□ -0.69
PNKP-202ENST00000593706 STHQ8IWL8 128 aa10.77□□□□□ -0.69
PNKP-202ENST00000593706 TOMM5Q8N4H5 51 aa10.77□□□□□ -0.69
PNKP-202ENST00000593706 SDHCQ99643 169 aaPredicted RBP10.77□□□□□ -0.69
PNKP-202ENST00000593706 SHPKQ9UHJ6 478 aa10.77□□□□□ -0.69
PNKP-202ENST00000593706 IGHV3-66A0A0C4DH42 116 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 A0A1B0GU03 582 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 IGLL5B9A064 214 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 TMEM50AO95807 157 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 IGKV1-17P01599 117 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 SULT1A3P0DMM9 295 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 SULT1A4P0DMN0 295 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 HTR2BP41595 481 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 NPBWR1P48145 328 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 SUB1P53999 127 aaKnown RBP eCLIP10.76□□□□□ -0.69
PNKP-202ENST00000593706 DEFB131AP59861 70 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 PRR20EP86478 221 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 PRR20CP86479 221 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 PRR20DP86480 221 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 PRR20BP86481 221 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 PRR20AP86496 221 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 MLANAQ16655 118 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 C2orf83Q53S99 150 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 TOMM20LQ6UXN7 152 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 DUSP18Q8NEJ0 188 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 OR4X1Q8NH49 305 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 MS4A6AQ9H2W1 248 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 TMEM231Q9H6L2 316 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 HSPB7Q9UBY9 170 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 RABAC1Q9UI14 185 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 KCNIP3Q9Y2W7 256 aa10.76□□□□□ -0.69
PNKP-202ENST00000593706 C11orf94C9JXX5 98 aa10.75□□□□□ -0.69
PNKP-202ENST00000593706 CLN5O75503 358 aa10.75□□□□□ -0.69
PNKP-202ENST00000593706 DFFBO76075 338 aa10.75□□□□□ -0.69
PNKP-202ENST00000593706 CCR6P51684 374 aa10.75□□□□□ -0.69
PNKP-202ENST00000593706 SRPXP78539 464 aa10.75□□□□□ -0.69
PNKP-202ENST00000593706 BAK1Q16611 211 aa10.75□□□□□ -0.69
PNKP-202ENST00000593706 TMEM128Q5BJH2 165 aa10.75□□□□□ -0.69
PNKP-202ENST00000593706 SPANXN2Q5MJ10 180 aa10.75□□□□□ -0.69
PNKP-202ENST00000593706 CENPSQ8N2Z9 138 aa10.75□□□□□ -0.69
PNKP-202ENST00000593706 LRTM2Q8N967 370 aa10.75□□□□□ -0.69
PNKP-202ENST00000593706 SLC24A4Q8NFF2 622 aa10.75□□□□□ -0.69
PNKP-202ENST00000593706 SLC25A21Q9BQT8 299 aaPredicted RBP10.75□□□□□ -0.69
PNKP-202ENST00000593706 VSIRQ9H7M9 311 aa10.75□□□□□ -0.69
PNKP-202ENST00000593706 ENY2Q9NPA8 101 aa10.75□□□□□ -0.69
PNKP-202ENST00000593706 PUS1Q9Y606 427 aaKnown RBP eCLIP10.75□□□□□ -0.69
PNKP-202ENST00000593706 FAT2Q9NYQ8 4349 aa10.75□□□□□ -0.69
PNKP-202ENST00000593706 DNAH2Q9P225 4427 aa10.74□□□□□ -0.69
PNKP-202ENST00000593706 PITX3O75364 302 aa10.74□□□□□ -0.69
PNKP-202ENST00000593706 APOHP02749 345 aaPredicted RBP10.74□□□□□ -0.69
PNKP-202ENST00000593706 OPRK1P41145 380 aa10.74□□□□□ -0.69
PNKP-202ENST00000593706 SMCO1Q147U7 214 aa10.74□□□□□ -0.69
PNKP-202ENST00000593706 ZNF600Q6ZNG1 722 aa10.74□□□□□ -0.69
PNKP-202ENST00000593706 TMED4Q7Z7H5 227 aa10.74□□□□□ -0.69
PNKP-202ENST00000593706 LGI3Q8N145 548 aa10.74□□□□□ -0.69
PNKP-202ENST00000593706 RNASEH2CQ8TDP1 164 aaKnown RBP10.74□□□□□ -0.69
PNKP-202ENST00000593706 HEYLQ9NQ87 328 aaPredicted RBP10.74□□□□□ -0.69
PNKP-202ENST00000593706 CACFD1Q9UGQ2 172 aa10.74□□□□□ -0.69
PNKP-202ENST00000593706 TRAV2A0A0B4J234 112 aa10.73□□□□□ -0.69
PNKP-202ENST00000593706 DUXBA0A1W2PPF3 345 aa10.73□□□□□ -0.69
PNKP-202ENST00000593706 CEBPZOSA8MTT3 80 aa10.73□□□□□ -0.69
PNKP-202ENST00000593706 NXPH3O95157 252 aa10.73□□□□□ -0.69
PNKP-202ENST00000593706 IGLC1P0CG04 106 aa10.73□□□□□ -0.69
PNKP-202ENST00000593706 ANXA3P12429 323 aa10.73□□□□□ -0.69
PNKP-202ENST00000593706 PPP1R1AQ13522 171 aa10.73□□□□□ -0.69
PNKP-202ENST00000593706 PRSS54Q6PEW0 395 aa10.73□□□□□ -0.69
PNKP-202ENST00000593706 LILRB2Q8N423 598 aa10.73□□□□□ -0.69
PNKP-202ENST00000593706 FAM24BQ8N5W8 94 aa10.73□□□□□ -0.69
PNKP-202ENST00000593706 Q8NAQ8 132 aa10.73□□□□□ -0.69
PNKP-202ENST00000593706 STXBP6Q8NFX7 210 aa10.73□□□□□ -0.69
PNKP-202ENST00000593706 HRH4Q9H3N8 390 aa10.73□□□□□ -0.69
PNKP-202ENST00000593706 IGHV4-28A0A0C4DH34 117 aa10.72□□□□□ -0.69
PNKP-202ENST00000593706 NPY1RP25929 384 aa10.72□□□□□ -0.69
PNKP-202ENST00000593706 BTCP35070 178 aa10.72□□□□□ -0.69
PNKP-202ENST00000593706 TMEM41BQ5BJD5 291 aa10.72□□□□□ -0.69
PNKP-202ENST00000593706 RBKSQ9H477 322 aa10.72□□□□□ -0.69
PNKP-202ENST00000593706 APLNQ9ULZ1 77 aa10.72□□□□□ -0.69
PNKP-202ENST00000593706 RYR1P21817 5038 aa10.72□□□□□ -0.69
PNKP-202ENST00000593706 RPS10-NUDT3A0A1W2PQS6 291 aa10.71□□□□□ -0.69
PNKP-202ENST00000593706 A0A1W2PS18 150 aa10.71□□□□□ -0.69
PNKP-202ENST00000593706 SCGB2A1O75556 95 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms