RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 NPIPB3Q92617 1050 aa16.65■□□□□ 0.26
MBD3-208ENST00000590830 VSIRQ9H7M9 311 aa16.65■□□□□ 0.26
MBD3-208ENST00000590830 DNAH7Q8WXX0 4024 aa16.65■□□□□ 0.26
MBD3-208ENST00000590830 TRAV30A0A087WSZ9 112 aa16.64■□□□□ 0.25
MBD3-208ENST00000590830 IGHV3-66A0A0C4DH42 116 aa16.64■□□□□ 0.25
MBD3-208ENST00000590830 MPTX1A8MV57 137 aa16.64■□□□□ 0.25
MBD3-208ENST00000590830 IAPPP10997 89 aa16.64■□□□□ 0.25
MBD3-208ENST00000590830 LINC00299Q6ZSB3 139 aa16.64■□□□□ 0.25
MBD3-208ENST00000590830 LYG2Q86SG7 212 aa16.64■□□□□ 0.25
MBD3-208ENST00000590830 GINS3Q9BRX5 216 aa16.64■□□□□ 0.25
MBD3-208ENST00000590830 MAGT1Q9H0U3 335 aa16.64■□□□□ 0.25
MBD3-208ENST00000590830 UBQLN2Q9UHD9 624 aa16.64■□□□□ 0.25
MBD3-208ENST00000590830 FAM90A26D6RGX4 464 aa16.63■□□□□ 0.25
MBD3-208ENST00000590830 LYRM1O43325 122 aa16.63■□□□□ 0.25
MBD3-208ENST00000590830 OR10J1P30954 320 aa16.63■□□□□ 0.25
MBD3-208ENST00000590830 ODF3L2Q3SX64 289 aa16.63■□□□□ 0.25
MBD3-208ENST00000590830 OR1S2Q8NGQ3 325 aa16.63■□□□□ 0.25
MBD3-208ENST00000590830 ACY3Q96HD9 319 aa16.63■□□□□ 0.25
MBD3-208ENST00000590830 RETNQ9HD89 108 aa16.63■□□□□ 0.25
MBD3-208ENST00000590830 ATP5IP56385 69 aaPredicted RBP16.62■□□□□ 0.25
MBD3-208ENST00000590830 ETFRF1Q6IPR1 90 aa16.62■□□□□ 0.25
MBD3-208ENST00000590830 SPATA25Q9BR10 227 aa16.62■□□□□ 0.25
MBD3-208ENST00000590830 IGKV3-7A0A075B6H7 116 aa16.61■□□□□ 0.25
MBD3-208ENST00000590830 DFFBO76075 338 aa16.61■□□□□ 0.25
MBD3-208ENST00000590830 IFNA4P05014 189 aa16.61■□□□□ 0.25
MBD3-208ENST00000590830 CRYBB3P26998 211 aa16.61■□□□□ 0.25
MBD3-208ENST00000590830 YPEL3P61236 119 aaPredicted RBP16.61■□□□□ 0.25
MBD3-208ENST00000590830 C4orf46Q504U0 113 aa16.61■□□□□ 0.25
MBD3-208ENST00000590830 TCF24Q7RTU0 167 aa16.61■□□□□ 0.25
MBD3-208ENST00000590830 COQ8AQ8NI60 647 aa16.61■□□□□ 0.25
MBD3-208ENST00000590830 CCDC32Q9BV29 185 aa16.61■□□□□ 0.25
MBD3-208ENST00000590830 OR4C46A6NHA9 309 aa16.6■□□□□ 0.25
MBD3-208ENST00000590830 SYNGR2O43760 224 aa16.6■□□□□ 0.25
MBD3-208ENST00000590830 NPPCP23582 126 aa16.6■□□□□ 0.25
MBD3-208ENST00000590830 GPX4P36969 197 aaPredicted RBP16.6■□□□□ 0.25
MBD3-208ENST00000590830 TFPI2P48307 235 aa16.6■□□□□ 0.25
MBD3-208ENST00000590830 ID3Q02535 119 aa16.6■□□□□ 0.25
MBD3-208ENST00000590830 GBGT1Q8N5D6 347 aa16.6■□□□□ 0.25
MBD3-208ENST00000590830 C20orf85Q9H1P6 137 aa16.6■□□□□ 0.25
MBD3-208ENST00000590830 KMT2CQ8NEZ4 4911 aaKnown RBP16.6■□□□□ 0.25
MBD3-208ENST00000590830 WRBO00258 174 aa16.59■□□□□ 0.25
MBD3-208ENST00000590830 MED6O75586 246 aa16.59■□□□□ 0.25
MBD3-208ENST00000590830 TCRBP04435 133 aa16.59■□□□□ 0.25
MBD3-208ENST00000590830 GAMTQ14353 236 aa16.59■□□□□ 0.25
MBD3-208ENST00000590830 Q8WTZ3 238 aa16.59■□□□□ 0.25
MBD3-208ENST00000590830 U3KQE9 123 aa16.59■□□□□ 0.25
MBD3-208ENST00000590830 IGKV1D-37A0A075B6S9 117 aa16.58■□□□□ 0.24
MBD3-208ENST00000590830 SCGB2A1O75556 95 aa16.58■□□□□ 0.24
MBD3-208ENST00000590830 OR4D5Q8NGN0 318 aa16.58■□□□□ 0.24
MBD3-208ENST00000590830 MITD1Q8WV92 249 aa16.58■□□□□ 0.24
MBD3-208ENST00000590830 METTL26Q96S19 204 aa16.58■□□□□ 0.24
MBD3-208ENST00000590830 EDA2RQ9HAV5 297 aa16.58■□□□□ 0.24
MBD3-208ENST00000590830 TBC1D24Q9ULP9 559 aa16.58■□□□□ 0.24
MBD3-208ENST00000590830 LOC102724200A0A096LPH7 203 aaPredicted RBP16.57■□□□□ 0.24
MBD3-208ENST00000590830 USF2Q15853 346 aaPredicted RBP16.57■□□□□ 0.24
MBD3-208ENST00000590830 S100ZQ8WXG8 99 aa16.57■□□□□ 0.24
MBD3-208ENST00000590830 FAM110AQ9BQ89 295 aa16.57■□□□□ 0.24
MBD3-208ENST00000590830 GGTLC1Q9BX51 225 aa16.57■□□□□ 0.24
MBD3-208ENST00000590830 MS4A6AQ9H2W1 248 aa16.57■□□□□ 0.24
MBD3-208ENST00000590830 TRAV6A0A075B6T7 132 aa16.56■□□□□ 0.24
MBD3-208ENST00000590830 PRSS46E5RG02 174 aa16.56■□□□□ 0.24
MBD3-208ENST00000590830 TOMM40O96008 361 aa16.56■□□□□ 0.24
MBD3-208ENST00000590830 RD3LP0DJH9 198 aa16.56■□□□□ 0.24
MBD3-208ENST00000590830 PSG1P11464 419 aa16.56■□□□□ 0.24
MBD3-208ENST00000590830 BMI1P35226 326 aa16.56■□□□□ 0.24
MBD3-208ENST00000590830 POLR2GP62487 172 aaKnown RBP eCLIP16.56■□□□□ 0.24
MBD3-208ENST00000590830 RAB11AP62491 216 aa16.56■□□□□ 0.24
MBD3-208ENST00000590830 ZNF124Q15973 351 aa16.56■□□□□ 0.24
MBD3-208ENST00000590830 WFDC3Q8IUB2 231 aa16.56■□□□□ 0.24
MBD3-208ENST00000590830 APRG1Q8IVJ8 170 aa16.56■□□□□ 0.24
MBD3-208ENST00000590830 CIB3Q96Q77 187 aaPredicted RBP16.56■□□□□ 0.24
MBD3-208ENST00000590830 IFNA21P01568 189 aa16.55■□□□□ 0.24
MBD3-208ENST00000590830 CD5P06127 495 aa16.55■□□□□ 0.24
MBD3-208ENST00000590830 ZNF90Q03938 601 aa16.55■□□□□ 0.24
MBD3-208ENST00000590830 FAM24BQ8N5W8 94 aa16.55■□□□□ 0.24
MBD3-208ENST00000590830 PTTG2Q9NZH5 202 aa16.55■□□□□ 0.24
MBD3-208ENST00000590830 PAIP2BQ9ULR5 123 aaKnown RBP16.55■□□□□ 0.24
MBD3-208ENST00000590830 A0A1W2PS18 150 aa16.54■□□□□ 0.24
MBD3-208ENST00000590830 H3BP45 60 aa16.54■□□□□ 0.24
MBD3-208ENST00000590830 IL4P05112 153 aa16.54■□□□□ 0.24
MBD3-208ENST00000590830 P2RY1P47900 373 aa16.54■□□□□ 0.24
MBD3-208ENST00000590830 SPANXN5Q5MJ07 72 aa16.54■□□□□ 0.24
MBD3-208ENST00000590830 SLC35E1Q96K37 410 aa16.54■□□□□ 0.24
MBD3-208ENST00000590830 TMEM231Q9H6L2 316 aa16.54■□□□□ 0.24
MBD3-208ENST00000590830 NUDT15Q9NV35 164 aa16.54■□□□□ 0.24
MBD3-208ENST00000590830 IGKV1OR2-108A0A075B7D4 117 aa16.53■□□□□ 0.24
MBD3-208ENST00000590830 NKX2-1P43699 371 aaPredicted RBP16.53■□□□□ 0.24
MBD3-208ENST00000590830 PAX9P55771 341 aa16.53■□□□□ 0.24
MBD3-208ENST00000590830 RPL11P62913 178 aaKnown RBP16.53■□□□□ 0.24
MBD3-208ENST00000590830 PAFAH1B2P68402 229 aa16.53■□□□□ 0.24
MBD3-208ENST00000590830 IFITM3Q01628 133 aa16.53■□□□□ 0.24
MBD3-208ENST00000590830 SEC22CQ9BRL7 303 aa16.53■□□□□ 0.24
MBD3-208ENST00000590830 MAP6D1Q9H9H5 199 aa16.53■□□□□ 0.24
MBD3-208ENST00000590830 HNRNPCP07910 306 aaKnown RBP eCLIP16.52■□□□□ 0.24
MBD3-208ENST00000590830 H2AFB2P0C5Z0 115 aa16.52■□□□□ 0.24
MBD3-208ENST00000590830 IAH1Q2TAA2 248 aaPredicted RBP16.52■□□□□ 0.24
MBD3-208ENST00000590830 C16orf54Q6UWD8 224 aa16.52■□□□□ 0.24
MBD3-208ENST00000590830 ZBTB8BQ8NAP8 495 aaPredicted RBP16.52■□□□□ 0.24
MBD3-208ENST00000590830 OR51G1Q8NGK1 321 aa16.52■□□□□ 0.24
MBD3-208ENST00000590830 MUC7Q8TAX7 377 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms