RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 MS4A10Q96PG2 267 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 TRGV9Q99603 122 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 C21orf62Q9NYP8 219 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 RAB2AP61019 212 aa13.61□□□□□ -0.23
CXXC1-212ENST00000589940 PXDC1Q5TGL8 231 aa13.61□□□□□ -0.23
CXXC1-212ENST00000589940 CXorf58Q96LI9 332 aa13.61□□□□□ -0.23
CXXC1-212ENST00000589940 SLC39A9Q9NUM3 307 aa13.61□□□□□ -0.23
CXXC1-212ENST00000589940 S4R3C0 116 aa13.61□□□□□ -0.23
CXXC1-212ENST00000589940 NF1P21359 2839 aa13.61□□□□□ -0.23
CXXC1-212ENST00000589940 FAM181BA6NEQ2 426 aa13.6□□□□□ -0.23
CXXC1-212ENST00000589940 YIF1AO95070 293 aa13.6□□□□□ -0.23
CXXC1-212ENST00000589940 IGLV1-40P01703 118 aa13.6□□□□□ -0.23
CXXC1-212ENST00000589940 IGLC1P0CG04 106 aa13.6□□□□□ -0.23
CXXC1-212ENST00000589940 M6PRP20645 277 aa13.6□□□□□ -0.23
CXXC1-212ENST00000589940 HILS1P60008 231 aa13.6□□□□□ -0.23
CXXC1-212ENST00000589940 SELENOTP62341 195 aa13.6□□□□□ -0.23
CXXC1-212ENST00000589940 ZNF90Q03938 601 aa13.6□□□□□ -0.23
CXXC1-212ENST00000589940 ZNF616Q08AN1 781 aa13.6□□□□□ -0.23
CXXC1-212ENST00000589940 ACOT6Q3I5F7 207 aaPredicted RBP13.6□□□□□ -0.23
CXXC1-212ENST00000589940 FAM223BA6NKX1 122 aa13.6□□□□□ -0.23
CXXC1-212ENST00000589940 TRGV3P03979 118 aa13.6□□□□□ -0.23
CXXC1-212ENST00000589940 LINC00869P0C866 280 aa13.6□□□□□ -0.23
CXXC1-212ENST00000589940 FAM223AQ8IWN6 122 aa13.6□□□□□ -0.23
CXXC1-212ENST00000589940 RNASE1P07998 156 aaKnown RBP13.59□□□□□ -0.23
CXXC1-212ENST00000589940 GATA2P23769 480 aaPredicted RBP13.59□□□□□ -0.23
CXXC1-212ENST00000589940 FCGR2BP31994 310 aaPredicted RBP13.59□□□□□ -0.23
CXXC1-212ENST00000589940 RPP25LQ8N5L8 163 aaKnown RBP13.59□□□□□ -0.23
CXXC1-212ENST00000589940 OR10G4Q8NGN3 311 aa13.59□□□□□ -0.23
CXXC1-212ENST00000589940 OR10G9Q8NGN4 311 aa13.59□□□□□ -0.23
CXXC1-212ENST00000589940 OR10G7Q8NGN6 311 aa13.59□□□□□ -0.23
CXXC1-212ENST00000589940 TXN2Q99757 166 aa13.59□□□□□ -0.23
CXXC1-212ENST00000589940 F8P00451 2351 aa13.59□□□□□ -0.23
CXXC1-212ENST00000589940 LINC00862A6NCI5 91 aa13.59□□□□□ -0.23
CXXC1-212ENST00000589940 F8W735 103 aaPredicted RBP13.59□□□□□ -0.23
CXXC1-212ENST00000589940 GNG7O60262 68 aa13.59□□□□□ -0.23
CXXC1-212ENST00000589940 Q56UQ5 140 aa13.59□□□□□ -0.23
CXXC1-212ENST00000589940 GCSAMLQ5JQS6 135 aa13.59□□□□□ -0.23
CXXC1-212ENST00000589940 TRAV30A0A087WSZ9 112 aa13.58□□□□□ -0.24
CXXC1-212ENST00000589940 CYSRT1A8MQ03 144 aa13.58□□□□□ -0.24
CXXC1-212ENST00000589940 IGKV1-17P01599 117 aa13.58□□□□□ -0.24
CXXC1-212ENST00000589940 TPPP2P59282 170 aa13.58□□□□□ -0.24
CXXC1-212ENST00000589940 RPL15P61313 204 aaKnown RBP13.58□□□□□ -0.24
CXXC1-212ENST00000589940 ZNF502Q8TBZ5 544 aa13.58□□□□□ -0.24
CXXC1-212ENST00000589940 RCC1LQ96I51 464 aaKnown RBP13.58□□□□□ -0.24
CXXC1-212ENST00000589940 IGHV3-23P01764 117 aa13.58□□□□□ -0.24
CXXC1-212ENST00000589940 IGHG4P01861 327 aa13.58□□□□□ -0.24
CXXC1-212ENST00000589940 PF4V1P10720 104 aa13.58□□□□□ -0.24
CXXC1-212ENST00000589940 ATP5G2Q06055 141 aa13.58□□□□□ -0.24
CXXC1-212ENST00000589940 ZNF329Q86UD4 541 aa13.58□□□□□ -0.24
CXXC1-212ENST00000589940 EEF1AKMT3Q96AZ1 226 aa13.58□□□□□ -0.24
CXXC1-212ENST00000589940 H2AFB1P0C5Y9 115 aa13.57□□□□□ -0.24
CXXC1-212ENST00000589940 ZNF726P1Q15940 193 aa13.57□□□□□ -0.24
CXXC1-212ENST00000589940 TIGITQ495A1 244 aa13.57□□□□□ -0.24
CXXC1-212ENST00000589940 LYPD6BQ8NI32 183 aa13.57□□□□□ -0.24
CXXC1-212ENST00000589940 USMG5Q96IX5 58 aa13.57□□□□□ -0.24
CXXC1-212ENST00000589940 JMJD8Q96S16 334 aa13.57□□□□□ -0.24
CXXC1-212ENST00000589940 HRH4Q9H3N8 390 aa13.57□□□□□ -0.24
CXXC1-212ENST00000589940 TRBV7-1A0A0A6YYK4 115 aa13.56□□□□□ -0.24
CXXC1-212ENST00000589940 TMEM89A2RUT3 159 aa13.56□□□□□ -0.24
CXXC1-212ENST00000589940 FABP1P07148 127 aa13.56□□□□□ -0.24
CXXC1-212ENST00000589940 SLC35B1P78383 322 aa13.56□□□□□ -0.24
CXXC1-212ENST00000589940 ACTR3CQ9C0K3 210 aaPredicted RBP13.56□□□□□ -0.24
CXXC1-212ENST00000589940 KLK15Q9H2R5 256 aa13.56□□□□□ -0.24
CXXC1-212ENST00000589940 SERTAD4Q9NUC0 356 aa13.56□□□□□ -0.24
CXXC1-212ENST00000589940 MED9Q9NWA0 146 aa13.56□□□□□ -0.24
CXXC1-212ENST00000589940 FN1P02751 2386 aaKnown RBP13.56□□□□□ -0.24
CXXC1-212ENST00000589940 OR2T8A6NH00 312 aa13.56□□□□□ -0.24
CXXC1-212ENST00000589940 SCGB2A1O75556 95 aa13.56□□□□□ -0.24
CXXC1-212ENST00000589940 PSMB8P28062 276 aa13.56□□□□□ -0.24
CXXC1-212ENST00000589940 RAB9AP51151 201 aa13.56□□□□□ -0.24
CXXC1-212ENST00000589940 FAM122CQ6P4D5 195 aa13.56□□□□□ -0.24
CXXC1-212ENST00000589940 Q6ZSV7 163 aa13.56□□□□□ -0.24
CXXC1-212ENST00000589940 GAR1Q9NY12 217 aaKnown RBP13.56□□□□□ -0.24
CXXC1-212ENST00000589940 PFDN2Q9UHV9 154 aa13.56□□□□□ -0.24
CXXC1-212ENST00000589940 PSMB11A5LHX3 300 aa13.55□□□□□ -0.24
CXXC1-212ENST00000589940 SEC14L6B5MCN3 397 aa13.55□□□□□ -0.24
CXXC1-212ENST00000589940 SSX7Q7RTT5 188 aa13.55□□□□□ -0.24
CXXC1-212ENST00000589940 SFT2D1Q8WV19 159 aa13.55□□□□□ -0.24
CXXC1-212ENST00000589940 CCDC140Q96MF4 163 aa13.55□□□□□ -0.24
CXXC1-212ENST00000589940 ATP6V0BQ99437 205 aa13.55□□□□□ -0.24
CXXC1-212ENST00000589940 SLC25A22Q9H936 323 aa13.55□□□□□ -0.24
CXXC1-212ENST00000589940 CTXND1A0A1B0GTU2 59 aa13.55□□□□□ -0.24
CXXC1-212ENST00000589940 TEX46H3BTG2 121 aa13.55□□□□□ -0.24
CXXC1-212ENST00000589940 CRYBA1P05813 215 aa13.55□□□□□ -0.24
CXXC1-212ENST00000589940 CTSGP08311 255 aa13.55□□□□□ -0.24
CXXC1-212ENST00000589940 PSG1P11464 419 aa13.55□□□□□ -0.24
CXXC1-212ENST00000589940 CDC34P49427 236 aaPredicted RBP13.55□□□□□ -0.24
CXXC1-212ENST00000589940 YPEL3P61236 119 aaPredicted RBP13.55□□□□□ -0.24
CXXC1-212ENST00000589940 MBD3L1Q8WWY6 194 aa13.55□□□□□ -0.24
CXXC1-212ENST00000589940 C19orf24Q9BVV8 132 aa13.55□□□□□ -0.24
CXXC1-212ENST00000589940 A0A0G2JLM5 398 aa13.54□□□□□ -0.24
CXXC1-212ENST00000589940 A0A1W2PPV4 95 aa13.54□□□□□ -0.24
CXXC1-212ENST00000589940 CRLF1O75462 422 aa13.54□□□□□ -0.24
CXXC1-212ENST00000589940 CLEC3BP05452 202 aa13.54□□□□□ -0.24
CXXC1-212ENST00000589940 RD3LP0DJH9 198 aa13.54□□□□□ -0.24
CXXC1-212ENST00000589940 GPR183P32249 361 aa13.54□□□□□ -0.24
CXXC1-212ENST00000589940 TEX38Q6PEX7 206 aa13.54□□□□□ -0.24
CXXC1-212ENST00000589940 RAB24Q969Q5 203 aa13.54□□□□□ -0.24
CXXC1-212ENST00000589940 TRAV1-1A0A0B4J248 108 aa13.54□□□□□ -0.24
CXXC1-212ENST00000589940 ANKRD34BA5PLL1 514 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms