RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	IFNA10	P01566	189 aa		12.9	□□□□□ -0.34
MBD1-221	ENST00000589867	TCRB	P04435	133 aa		12.9	□□□□□ -0.34
MBD1-221	ENST00000589867	SLC25A4	P12235	298 aa		12.9	□□□□□ -0.34
MBD1-221	ENST00000589867	ST8SIA2	Q92186	375 aa		12.9	□□□□□ -0.34
MBD1-221	ENST00000589867	NPIPB3	Q92617	1050 aa		12.9	□□□□□ -0.34
MBD1-221	ENST00000589867	SPAG8	Q99932	426 aa	Predicted RBP	12.9	□□□□□ -0.34
MBD1-221	ENST00000589867	MAGT1	Q9H0U3	335 aa		12.9	□□□□□ -0.34
MBD1-221	ENST00000589867	PRSS46	E5RG02	174 aa		12.89	□□□□□ -0.35
MBD1-221	ENST00000589867	ID3	Q02535	119 aa		12.89	□□□□□ -0.35
MBD1-221	ENST00000589867	ODF3L2	Q3SX64	289 aa		12.89	□□□□□ -0.35
MBD1-221	ENST00000589867	RBPMS2	Q6ZRY4	209 aa	Known RBP	12.89	□□□□□ -0.35
MBD1-221	ENST00000589867	SLC16A13	Q7RTY0	426 aa		12.89	□□□□□ -0.35
MBD1-221	ENST00000589867	OR4D5	Q8NGN0	318 aa		12.89	□□□□□ -0.35
MBD1-221	ENST00000589867	MITD1	Q8WV92	249 aa		12.89	□□□□□ -0.35
MBD1-221	ENST00000589867	RCHY1	Q96PM5	261 aa		12.89	□□□□□ -0.35
MBD1-221	ENST00000589867	SRD5A3	Q9H8P0	318 aa		12.89	□□□□□ -0.35
MBD1-221	ENST00000589867	CSMD3	Q7Z407	3707 aa		12.88	□□□□□ -0.35
MBD1-221	ENST00000589867	IGKV1D-37	A0A075B6S9	117 aa		12.88	□□□□□ -0.35
MBD1-221	ENST00000589867	IGHV3-66	A0A0C4DH42	116 aa		12.88	□□□□□ -0.35
MBD1-221	ENST00000589867	OR10J1	P30954	320 aa		12.88	□□□□□ -0.35
MBD1-221	ENST00000589867	C4orf46	Q504U0	113 aa		12.88	□□□□□ -0.35
MBD1-221	ENST00000589867	OR1S2	Q8NGQ3	325 aa		12.88	□□□□□ -0.35
MBD1-221	ENST00000589867	S100Z	Q8WXG8	99 aa		12.88	□□□□□ -0.35
MBD1-221	ENST00000589867	TUBA4B	Q9H853	241 aa		12.88	□□□□□ -0.35
MBD1-221	ENST00000589867		U3KQE9	123 aa		12.88	□□□□□ -0.35
MBD1-221	ENST00000589867	TRAV6	A0A075B6T7	132 aa		12.87	□□□□□ -0.35
MBD1-221	ENST00000589867	TRAV30	A0A087WSZ9	112 aa		12.87	□□□□□ -0.35
MBD1-221	ENST00000589867	SYNGR2	O43760	224 aa		12.87	□□□□□ -0.35
MBD1-221	ENST00000589867	CRYBB3	P26998	211 aa		12.87	□□□□□ -0.35
MBD1-221	ENST00000589867	ATP5I	P56385	69 aa	Predicted RBP	12.87	□□□□□ -0.35
MBD1-221	ENST00000589867	YPEL3	P61236	119 aa	Predicted RBP	12.87	□□□□□ -0.35
MBD1-221	ENST00000589867	ASAH1	Q13510	395 aa		12.87	□□□□□ -0.35
MBD1-221	ENST00000589867	GAMT	Q14353	236 aa		12.87	□□□□□ -0.35
MBD1-221	ENST00000589867	NOXA1	Q86UR1	476 aa		12.87	□□□□□ -0.35
MBD1-221	ENST00000589867	COQ8A	Q8NI60	647 aa		12.87	□□□□□ -0.35
MBD1-221	ENST00000589867	ACY3	Q96HD9	319 aa		12.87	□□□□□ -0.35
MBD1-221	ENST00000589867	WWC2-AS2	Q96NR7	200 aa		12.87	□□□□□ -0.35
MBD1-221	ENST00000589867	NUDT15	Q9NV35	164 aa		12.87	□□□□□ -0.35
MBD1-221	ENST00000589867	KMT2C	Q8NEZ4	4911 aa	Known RBP	12.87	□□□□□ -0.35
MBD1-221	ENST00000589867	WRB	O00258	174 aa		12.86	□□□□□ -0.35
MBD1-221	ENST00000589867	IFNA4	P05014	189 aa		12.86	□□□□□ -0.35
MBD1-221	ENST00000589867	GPX4	P36969	197 aa	Predicted RBP	12.86	□□□□□ -0.35
MBD1-221	ENST00000589867	PAX9	P55771	341 aa		12.86	□□□□□ -0.35
MBD1-221	ENST00000589867	POLR2G	P62487	172 aa	Known RBP eCLIP	12.86	□□□□□ -0.35
MBD1-221	ENST00000589867	LAMTOR1	Q6IAA8	161 aa		12.86	□□□□□ -0.35
MBD1-221	ENST00000589867	SEC22C	Q9BRL7	303 aa		12.86	□□□□□ -0.35
MBD1-221	ENST00000589867	GINS3	Q9BRX5	216 aa		12.86	□□□□□ -0.35
MBD1-221	ENST00000589867	UBQLN2	Q9UHD9	624 aa		12.86	□□□□□ -0.35
MBD1-221	ENST00000589867	IGKV1OR2-108	A0A075B7D4	117 aa		12.85	□□□□□ -0.35
MBD1-221	ENST00000589867	MED6	O75586	246 aa		12.85	□□□□□ -0.35
MBD1-221	ENST00000589867	UPK1B	O75841	260 aa		12.85	□□□□□ -0.35
MBD1-221	ENST00000589867	DFFB	O76075	338 aa		12.85	□□□□□ -0.35
MBD1-221	ENST00000589867	USF2	Q15853	346 aa	Predicted RBP	12.85	□□□□□ -0.35
MBD1-221	ENST00000589867	ETFRF1	Q6IPR1	90 aa		12.85	□□□□□ -0.35
MBD1-221	ENST00000589867	TCF24	Q7RTU0	167 aa		12.85	□□□□□ -0.35
MBD1-221	ENST00000589867	RETN	Q9HD89	108 aa		12.85	□□□□□ -0.35
MBD1-221	ENST00000589867	PMS2P5	A8MQ11	134 aa		12.84	□□□□□ -0.35
MBD1-221	ENST00000589867	TOMM40	O96008	361 aa		12.84	□□□□□ -0.35
MBD1-221	ENST00000589867	ZNF846	Q147U1	533 aa		12.84	□□□□□ -0.35
MBD1-221	ENST00000589867	BATF3	Q9NR55	127 aa		12.84	□□□□□ -0.35
MBD1-221	ENST00000589867	STARD9	Q9P2P6	4700 aa		12.83	□□□□□ -0.35
MBD1-221	ENST00000589867	IGKV3-7	A0A075B6H7	116 aa		12.83	□□□□□ -0.36
MBD1-221	ENST00000589867		H3BP45	60 aa		12.83	□□□□□ -0.36
MBD1-221	ENST00000589867	CCS	O14618	274 aa		12.83	□□□□□ -0.36
MBD1-221	ENST00000589867	H2AFB2	P0C5Z0	115 aa		12.83	□□□□□ -0.36
MBD1-221	ENST00000589867	PSG1	P11464	419 aa		12.83	□□□□□ -0.36
MBD1-221	ENST00000589867	NPPC	P23582	126 aa		12.83	□□□□□ -0.36
MBD1-221	ENST00000589867	NKX2-1	P43699	371 aa	Predicted RBP	12.83	□□□□□ -0.36
MBD1-221	ENST00000589867	ZNF90	Q03938	601 aa		12.83	□□□□□ -0.36
MBD1-221	ENST00000589867	ZNF124	Q15973	351 aa		12.83	□□□□□ -0.36
MBD1-221	ENST00000589867	GBGT1	Q8N5D6	347 aa		12.83	□□□□□ -0.36
MBD1-221	ENST00000589867	FAM24B	Q8N5W8	94 aa		12.83	□□□□□ -0.36
MBD1-221	ENST00000589867	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	12.83	□□□□□ -0.36
MBD1-221	ENST00000589867	ZNF431	Q8TF32	576 aa	Predicted RBP	12.83	□□□□□ -0.36
MBD1-221	ENST00000589867	CIB3	Q96Q77	187 aa	Predicted RBP	12.83	□□□□□ -0.36
MBD1-221	ENST00000589867	FAM110A	Q9BQ89	295 aa		12.83	□□□□□ -0.36
MBD1-221	ENST00000589867	WDR12	Q9GZL7	423 aa	Known RBP	12.83	□□□□□ -0.36
MBD1-221	ENST00000589867	RCL1	Q9Y2P8	373 aa	Known RBP	12.83	□□□□□ -0.36
MBD1-221	ENST00000589867	AGRN	O00468	2067 aa		12.82	□□□□□ -0.36
MBD1-221	ENST00000589867	DYNC2H1	Q8NCM8	4307 aa	Known RBP	12.82	□□□□□ -0.36
MBD1-221	ENST00000589867	OR4C46	A6NHA9	309 aa		12.82	□□□□□ -0.36
MBD1-221	ENST00000589867	CCNK	O75909	580 aa		12.82	□□□□□ -0.36
MBD1-221	ENST00000589867	IFNA21	P01568	189 aa		12.82	□□□□□ -0.36
MBD1-221	ENST00000589867	TFPI2	P48307	235 aa		12.82	□□□□□ -0.36
MBD1-221	ENST00000589867	IAH1	Q2TAA2	248 aa	Predicted RBP	12.82	□□□□□ -0.36
MBD1-221	ENST00000589867	SPANXN5	Q5MJ07	72 aa		12.82	□□□□□ -0.36
MBD1-221	ENST00000589867	STPG3	Q8N7X2	389 aa		12.82	□□□□□ -0.36
MBD1-221	ENST00000589867	THAP8	Q8NA92	274 aa		12.82	□□□□□ -0.36
MBD1-221	ENST00000589867		Q8WTZ3	238 aa		12.82	□□□□□ -0.36
MBD1-221	ENST00000589867	GLMP	Q8WWB7	406 aa		12.82	□□□□□ -0.36
MBD1-221	ENST00000589867	METTL26	Q96S19	204 aa		12.82	□□□□□ -0.36
MBD1-221	ENST00000589867	SPATA25	Q9BR10	227 aa		12.82	□□□□□ -0.36
MBD1-221	ENST00000589867	MS4A6A	Q9H2W1	248 aa		12.82	□□□□□ -0.36
MBD1-221	ENST00000589867	ZMAT4	Q9H898	229 aa		12.82	□□□□□ -0.36
MBD1-221	ENST00000589867	EDA2R	Q9HAV5	297 aa		12.82	□□□□□ -0.36
MBD1-221	ENST00000589867	FAM240B	A0A1B0GVZ2	78 aa		12.81	□□□□□ -0.36
MBD1-221	ENST00000589867	IL4	P05112	153 aa		12.81	□□□□□ -0.36
MBD1-221	ENST00000589867	RD3L	P0DJH9	198 aa		12.81	□□□□□ -0.36
MBD1-221	ENST00000589867	P2RY1	P47900	373 aa		12.81	□□□□□ -0.36
MBD1-221	ENST00000589867	RAB11A	P62491	216 aa		12.81	□□□□□ -0.36

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