RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 LCN12Q6JVE5 192 aa15.25■□□□□ 0.03
DDX39A-207ENST00000588542 ZNF600Q6ZNG1 722 aa15.25■□□□□ 0.03
DDX39A-207ENST00000588542 NPIPB3Q92617 1050 aa15.25■□□□□ 0.03
DDX39A-207ENST00000588542 SMIM8Q96KF7 97 aa15.25■□□□□ 0.03
DDX39A-207ENST00000588542 ZFAND3Q9H8U3 227 aa15.25■□□□□ 0.03
DDX39A-207ENST00000588542 TRAV30A0A087WSZ9 112 aa15.24■□□□□ 0.03
DDX39A-207ENST00000588542 C5orf51A6NDU8 294 aa15.24■□□□□ 0.03
DDX39A-207ENST00000588542 YIF1AO95070 293 aa15.24■□□□□ 0.03
DDX39A-207ENST00000588542 RPP30P78346 268 aaKnown RBP15.24■□□□□ 0.03
DDX39A-207ENST00000588542 GAMTQ14353 236 aa15.24■□□□□ 0.03
DDX39A-207ENST00000588542 BTNL8Q6UX41 500 aa15.24■□□□□ 0.03
DDX39A-207ENST00000588542 ACY3Q96HD9 319 aa15.24■□□□□ 0.03
DDX39A-207ENST00000588542 C2orf50Q96LR7 162 aa15.24■□□□□ 0.03
DDX39A-207ENST00000588542 PSENENQ9NZ42 101 aa15.24■□□□□ 0.03
DDX39A-207ENST00000588542 PAIP2BQ9ULR5 123 aaKnown RBP15.24■□□□□ 0.03
DDX39A-207ENST00000588542 STRAPQ9Y3F4 350 aaKnown RBP15.24■□□□□ 0.03
DDX39A-207ENST00000588542 PUS1Q9Y606 427 aaKnown RBP eCLIP15.24■□□□□ 0.03
DDX39A-207ENST00000588542 DNAH9Q9NYC9 4486 aa15.23■□□□□ 0.03
DDX39A-207ENST00000588542 ZNF785A8K8V0 405 aa15.23■□□□□ 0.03
DDX39A-207ENST00000588542 OR10J1P30954 320 aa15.23■□□□□ 0.03
DDX39A-207ENST00000588542 IL15RAQ13261 267 aa15.23■□□□□ 0.03
DDX39A-207ENST00000588542 GSG1LQ6UXU4 331 aa15.23■□□□□ 0.03
DDX39A-207ENST00000588542 OR1S2Q8NGQ3 325 aa15.23■□□□□ 0.03
DDX39A-207ENST00000588542 PTTG1O95997 202 aa15.22■□□□□ 0.03
DDX39A-207ENST00000588542 DEFB121Q5J5C9 76 aa15.22■□□□□ 0.03
DDX39A-207ENST00000588542 TMEM61Q8N0U2 210 aa15.22■□□□□ 0.03
DDX39A-207ENST00000588542 Q8N1Y9 231 aa15.22■□□□□ 0.03
DDX39A-207ENST00000588542 WDR89Q96FK6 387 aaPredicted RBP15.22■□□□□ 0.03
DDX39A-207ENST00000588542 RAB40CQ96S21 281 aa15.22■□□□□ 0.03
DDX39A-207ENST00000588542 SMPXQ9UHP9 88 aa15.22■□□□□ 0.03
DDX39A-207ENST00000588542 COL7A1Q02388 2944 aa15.21■□□□□ 0.03
DDX39A-207ENST00000588542 IGHV7-4-1A0A0J9YVY3 117 aa15.21■□□□□ 0.03
DDX39A-207ENST00000588542 C7orf66A4D0T2 115 aa15.21■□□□□ 0.03
DDX39A-207ENST00000588542 PMS2P5A8MQ11 134 aa15.21■□□□□ 0.03
DDX39A-207ENST00000588542 K7EPK0 472 aa15.21■□□□□ 0.03
DDX39A-207ENST00000588542 TAS2R30P59541 319 aa15.21■□□□□ 0.03
DDX39A-207ENST00000588542 YPEL3P61236 119 aaPredicted RBP15.21■□□□□ 0.03
DDX39A-207ENST00000588542 TMEM14EPQ6UXP3 125 aa15.21■□□□□ 0.03
DDX39A-207ENST00000588542 SLC35E1Q96K37 410 aa15.21■□□□□ 0.03
DDX39A-207ENST00000588542 C11orf1Q9H5F2 150 aa15.21■□□□□ 0.03
DDX39A-207ENST00000588542 IGKV1D-37A0A075B6S9 117 aa15.2■□□□□ 0.02
DDX39A-207ENST00000588542 TRAV14DV4A0A0A6YYC5 116 aa15.2■□□□□ 0.02
DDX39A-207ENST00000588542 SCGB2A1O75556 95 aa15.2■□□□□ 0.02
DDX39A-207ENST00000588542 SCAF4O95104 1147 aaKnown RBP15.2■□□□□ 0.02
DDX39A-207ENST00000588542 SIX6O95475 246 aa15.2■□□□□ 0.02
DDX39A-207ENST00000588542 LSM5Q9Y4Y9 91 aaKnown RBP15.2■□□□□ 0.02
DDX39A-207ENST00000588542 IGHV3-49A0A0A0MS15 119 aa15.19■□□□□ 0.02
DDX39A-207ENST00000588542 GOSR2O14653 212 aa15.19■□□□□ 0.02
DDX39A-207ENST00000588542 CHEK1O14757 476 aa15.19■□□□□ 0.02
DDX39A-207ENST00000588542 TSC22D2O75157 780 aa15.19■□□□□ 0.02
DDX39A-207ENST00000588542 CCNKO75909 580 aa15.19■□□□□ 0.02
DDX39A-207ENST00000588542 GINS3Q9BRX5 216 aa15.19■□□□□ 0.02
DDX39A-207ENST00000588542 IGKV1OR2-108A0A075B7D4 117 aa15.18■□□□□ 0.02
DDX39A-207ENST00000588542 APOHP02749 345 aaPredicted RBP15.18■□□□□ 0.02
DDX39A-207ENST00000588542 DCTN2Q13561 401 aaKnown RBP15.18■□□□□ 0.02
DDX39A-207ENST00000588542 RAB32Q13637 225 aa15.18■□□□□ 0.02
DDX39A-207ENST00000588542 THAP8Q8NA92 274 aa15.18■□□□□ 0.02
DDX39A-207ENST00000588542 RHPN1-AS1Q9BWJ2 59 aa15.18■□□□□ 0.02
DDX39A-207ENST00000588542 IGHV3OR16-13A0A075B7E8 117 aa15.17■□□□□ 0.02
DDX39A-207ENST00000588542 IGHV3-74A0A0B4J1X5 117 aa15.17■□□□□ 0.02
DDX39A-207ENST00000588542 TRAV25A0A0B4J276 109 aa15.17■□□□□ 0.02
DDX39A-207ENST00000588542 TOMM40O96008 361 aa15.17■□□□□ 0.02
DDX39A-207ENST00000588542 METTL15P1P0C7V9 234 aa15.17■□□□□ 0.02
DDX39A-207ENST00000588542 GUCA2BQ16661 112 aa15.17■□□□□ 0.02
DDX39A-207ENST00000588542 OR8G2PQ6IF36 304 aa15.17■□□□□ 0.02
DDX39A-207ENST00000588542 ACOT7LQ6ZUV0 252 aa15.17■□□□□ 0.02
DDX39A-207ENST00000588542 Q8WTZ3 238 aa15.17■□□□□ 0.02
DDX39A-207ENST00000588542 RNF2Q99496 336 aa15.17■□□□□ 0.02
DDX39A-207ENST00000588542 VSIRQ9H7M9 311 aa15.17■□□□□ 0.02
DDX39A-207ENST00000588542 SMAD5-AS1Q9Y6J3 95 aa15.17■□□□□ 0.02
DDX39A-207ENST00000588542 ZFP92A6NM28 416 aa15.16■□□□□ 0.02
DDX39A-207ENST00000588542 PSG1P11464 419 aa15.16■□□□□ 0.02
DDX39A-207ENST00000588542 CRYBB3P26998 211 aa15.16■□□□□ 0.02
DDX39A-207ENST00000588542 ZNF90Q03938 601 aa15.16■□□□□ 0.02
DDX39A-207ENST00000588542 LILRB2Q8N423 598 aa15.16■□□□□ 0.02
DDX39A-207ENST00000588542 ST8SIA2Q92186 375 aa15.16■□□□□ 0.02
DDX39A-207ENST00000588542 L7N2F9 121 aa15.15■□□□□ 0.02
DDX39A-207ENST00000588542 TSPAN4O14817 238 aa15.15■□□□□ 0.02
DDX39A-207ENST00000588542 SSNA1O43805 119 aa15.15■□□□□ 0.02
DDX39A-207ENST00000588542 CD7P09564 240 aa15.15■□□□□ 0.02
DDX39A-207ENST00000588542 RD3LP0DJH9 198 aa15.15■□□□□ 0.02
DDX39A-207ENST00000588542 H2BFSP57053 126 aa15.15■□□□□ 0.02
DDX39A-207ENST00000588542 S100A10P60903 97 aa15.15■□□□□ 0.02
DDX39A-207ENST00000588542 VAMP2P63027 116 aa15.15■□□□□ 0.02
DDX39A-207ENST00000588542 ARL16Q0P5N6 197 aa15.15■□□□□ 0.02
DDX39A-207ENST00000588542 USF2Q15853 346 aaPredicted RBP15.15■□□□□ 0.02
DDX39A-207ENST00000588542 FAM90A2PQ658T7 463 aa15.15■□□□□ 0.02
DDX39A-207ENST00000588542 RBPMS2Q6ZRY4 209 aaKnown RBP15.15■□□□□ 0.02
DDX39A-207ENST00000588542 TRGV9Q99603 122 aa15.15■□□□□ 0.02
DDX39A-207ENST00000588542 NMES1Q9C002 83 aa15.15■□□□□ 0.02
DDX39A-207ENST00000588542 ALG5Q9Y673 324 aa15.15■□□□□ 0.02
DDX39A-207ENST00000588542 IL4P05112 153 aa15.14■□□□□ 0.01
DDX39A-207ENST00000588542 NPPCP23582 126 aa15.14■□□□□ 0.01
DDX39A-207ENST00000588542 LAMTOR1Q6IAA8 161 aa15.14■□□□□ 0.01
DDX39A-207ENST00000588542 GTSCR1Q86UQ5 136 aa15.14■□□□□ 0.01
DDX39A-207ENST00000588542 METTL26Q96S19 204 aa15.14■□□□□ 0.01
DDX39A-207ENST00000588542 B9D2Q9BPU9 175 aa15.14■□□□□ 0.01
DDX39A-207ENST00000588542 NEURL2Q9BR09 285 aa15.14■□□□□ 0.01
DDX39A-207ENST00000588542 U3KQE9 123 aa15.14■□□□□ 0.01
DDX39A-207ENST00000588542 IGHV3-66A0A0C4DH42 116 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms