RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 TCRBV4S1A1TA0A5B7 111 aa8.77□□□□□ -1.01
VMP1-207ENST00000588131 TMEM89A2RUT3 159 aa8.77□□□□□ -1.01
VMP1-207ENST00000588131 ZFP92A6NM28 416 aa8.77□□□□□ -1.01
VMP1-207ENST00000588131 C17orf112F2Z3M2 114 aa8.77□□□□□ -1.01
VMP1-207ENST00000588131 NDUFA7O95182 113 aa8.77□□□□□ -1.01
VMP1-207ENST00000588131 IFNA7P01567 189 aa8.77□□□□□ -1.01
VMP1-207ENST00000588131 ELLP55199 621 aaPredicted RBP8.77□□□□□ -1.01
VMP1-207ENST00000588131 PRR20EP86478 221 aa8.77□□□□□ -1.01
VMP1-207ENST00000588131 PRR20CP86479 221 aa8.77□□□□□ -1.01
VMP1-207ENST00000588131 PRR20DP86480 221 aa8.77□□□□□ -1.01
VMP1-207ENST00000588131 PRR20BP86481 221 aa8.77□□□□□ -1.01
VMP1-207ENST00000588131 PRR20AP86496 221 aa8.77□□□□□ -1.01
VMP1-207ENST00000588131 KIAA0141Q14154 515 aaPredicted RBP8.77□□□□□ -1.01
VMP1-207ENST00000588131 TIGITQ495A1 244 aa8.77□□□□□ -1.01
VMP1-207ENST00000588131 CYP2G1PQ6ZSU1 146 aa8.77□□□□□ -1.01
VMP1-207ENST00000588131 ZNF767PQ75MW2 155 aa8.77□□□□□ -1.01
VMP1-207ENST00000588131 ZNF709Q8N972 641 aa8.77□□□□□ -1.01
VMP1-207ENST00000588131 BPIFCQ8NFQ6 507 aa8.77□□□□□ -1.01
VMP1-207ENST00000588131 LINC01006Q8NI28 216 aa8.77□□□□□ -1.01
VMP1-207ENST00000588131 PCNPQ8WW12 178 aaKnown RBP8.77□□□□□ -1.01
VMP1-207ENST00000588131 EEF1AKMT3Q96AZ1 226 aa8.77□□□□□ -1.01
VMP1-207ENST00000588131 CXorf58Q96LI9 332 aa8.77□□□□□ -1.01
VMP1-207ENST00000588131 TRGV9Q99603 122 aa8.77□□□□□ -1.01
VMP1-207ENST00000588131 VSIRQ9H7M9 311 aa8.77□□□□□ -1.01
VMP1-207ENST00000588131 PXMP4Q9Y6I8 212 aa8.77□□□□□ -1.01
VMP1-207ENST00000588131 OR2T8A6NH00 312 aa8.76□□□□□ -1.01
VMP1-207ENST00000588131 GNG7O60262 68 aa8.76□□□□□ -1.01
VMP1-207ENST00000588131 YIF1AO95070 293 aa8.76□□□□□ -1.01
VMP1-207ENST00000588131 IGKV1-17P01599 117 aa8.76□□□□□ -1.01
VMP1-207ENST00000588131 IGHV3-11P01762 117 aa8.76□□□□□ -1.01
VMP1-207ENST00000588131 RPLP1P05386 114 aaKnown RBP8.76□□□□□ -1.01
VMP1-207ENST00000588131 ELANEP08246 267 aa8.76□□□□□ -1.01
VMP1-207ENST00000588131 LINC00869P0C866 280 aa8.76□□□□□ -1.01
VMP1-207ENST00000588131 FCGR2BP31994 310 aaPredicted RBP8.76□□□□□ -1.01
VMP1-207ENST00000588131 GPR183P32249 361 aa8.76□□□□□ -1.01
VMP1-207ENST00000588131 RPL29P47914 159 aaKnown RBP8.76□□□□□ -1.01
VMP1-207ENST00000588131 NPBWR1P48145 328 aa8.76□□□□□ -1.01
VMP1-207ENST00000588131 SULT1A2P50226 295 aa8.76□□□□□ -1.01
VMP1-207ENST00000588131 FOXE3Q13461 319 aa8.76□□□□□ -1.01
VMP1-207ENST00000588131 RAB31Q13636 194 aa8.76□□□□□ -1.01
VMP1-207ENST00000588131 GCSAMLQ5JQS6 135 aa8.76□□□□□ -1.01
VMP1-207ENST00000588131 FFAR4Q5NUL3 377 aa8.76□□□□□ -1.01
VMP1-207ENST00000588131 EIF5AL1Q6IS14 154 aaKnown RBP8.76□□□□□ -1.01
VMP1-207ENST00000588131 TEX38Q6PEX7 206 aa8.76□□□□□ -1.01
VMP1-207ENST00000588131 CLEC19AQ6UXS0 136 aa8.76□□□□□ -1.01
VMP1-207ENST00000588131 KLHDC1Q8N7A1 406 aa8.76□□□□□ -1.01
VMP1-207ENST00000588131 STPG3Q8N7X2 389 aa8.76□□□□□ -1.01
VMP1-207ENST00000588131 MYOZ3Q8TDC0 251 aa8.76□□□□□ -1.01
VMP1-207ENST00000588131 WIPF2Q8TF74 440 aaPredicted RBP8.76□□□□□ -1.01
VMP1-207ENST00000588131 ZNF414Q96IQ9 312 aa8.76□□□□□ -1.01
VMP1-207ENST00000588131 USMG5Q96IX5 58 aa8.76□□□□□ -1.01
VMP1-207ENST00000588131 TXN2Q99757 166 aa8.76□□□□□ -1.01
VMP1-207ENST00000588131 SETD2Q9BYW2 2564 aaPredicted RBP8.76□□□□□ -1.01
VMP1-207ENST00000588131 MTORP42345 2549 aa8.75□□□□□ -1.01
VMP1-207ENST00000588131 TRBV7-1A0A0A6YYK4 115 aa8.75□□□□□ -1.01
VMP1-207ENST00000588131 TRBV12-3P01733 135 aa8.75□□□□□ -1.01
VMP1-207ENST00000588131 CTSGP08311 255 aa8.75□□□□□ -1.01
VMP1-207ENST00000588131 ADMP35318 185 aa8.75□□□□□ -1.01
VMP1-207ENST00000588131 FHITP49789 147 aa8.75□□□□□ -1.01
VMP1-207ENST00000588131 RAB2AP61019 212 aa8.75□□□□□ -1.01
VMP1-207ENST00000588131 B2MP61769 119 aa8.75□□□□□ -1.01
VMP1-207ENST00000588131 SERF2P84101 59 aa8.75□□□□□ -1.01
VMP1-207ENST00000588131 TCTEX1D4Q5JR98 221 aa8.75□□□□□ -1.01
VMP1-207ENST00000588131 HIST2H2BDQ6DRA6 164 aa8.75□□□□□ -1.01
VMP1-207ENST00000588131 RNF152Q8N8N0 203 aa8.75□□□□□ -1.01
VMP1-207ENST00000588131 OR5AU1Q8NGC0 362 aa8.75□□□□□ -1.01
VMP1-207ENST00000588131 CHRDL1Q9BU40 450 aa8.75□□□□□ -1.01
VMP1-207ENST00000588131 GNB4Q9HAV0 340 aa8.75□□□□□ -1.01
VMP1-207ENST00000588131 SLC39A9Q9NUM3 307 aa8.75□□□□□ -1.01
VMP1-207ENST00000588131 NSD1Q96L73 2696 aaPredicted RBP8.75□□□□□ -1.01
VMP1-207ENST00000588131 TRAV30A0A087WSZ9 112 aa8.74□□□□□ -1.01
VMP1-207ENST00000588131 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.74□□□□□ -1.01
VMP1-207ENST00000588131 A0A0G2JLM5 398 aa8.74□□□□□ -1.01
VMP1-207ENST00000588131 PPP5D1E7EU14 171 aa8.74□□□□□ -1.01
VMP1-207ENST00000588131 EIF3GO75821 320 aaKnown RBP eCLIP8.74□□□□□ -1.01
VMP1-207ENST00000588131 TSPAN15O95858 294 aa8.74□□□□□ -1.01
VMP1-207ENST00000588131 CLEC3BP05452 202 aa8.74□□□□□ -1.01
VMP1-207ENST00000588131 PSG1P11464 419 aa8.74□□□□□ -1.01
VMP1-207ENST00000588131 TMEM41BQ5BJD5 291 aa8.74□□□□□ -1.01
VMP1-207ENST00000588131 AKR1C8PQ5T2L2 129 aa8.74□□□□□ -1.01
VMP1-207ENST00000588131 ZNF343Q6P1L6 599 aa8.74□□□□□ -1.01
VMP1-207ENST00000588131 COMMD1Q8N668 190 aa8.74□□□□□ -1.01
VMP1-207ENST00000588131 ZNF491Q8N8L2 437 aa8.74□□□□□ -1.01
VMP1-207ENST00000588131 OR4X2Q8NGF9 303 aa8.74□□□□□ -1.01
VMP1-207ENST00000588131 OR5B12Q96R08 314 aa8.74□□□□□ -1.01
VMP1-207ENST00000588131 KCNIP2Q9NS61 270 aa8.74□□□□□ -1.01
VMP1-207ENST00000588131 RPRMQ9NS64 109 aa8.74□□□□□ -1.01
VMP1-207ENST00000588131 ANKRD34BA5PLL1 514 aa8.73□□□□□ -1.01
VMP1-207ENST00000588131 UMAD1C9J7I0 102 aa8.73□□□□□ -1.01
VMP1-207ENST00000588131 TGOLN2O43493 480 aa8.73□□□□□ -1.01
VMP1-207ENST00000588131 TOMM40O96008 361 aa8.73□□□□□ -1.01
VMP1-207ENST00000588131 NMBP08949 121 aa8.73□□□□□ -1.01
VMP1-207ENST00000588131 YPEL3P61236 119 aaPredicted RBP8.73□□□□□ -1.01
VMP1-207ENST00000588131 SELENOTP62341 195 aa8.73□□□□□ -1.01
VMP1-207ENST00000588131 ZNF616Q08AN1 781 aa8.73□□□□□ -1.01
VMP1-207ENST00000588131 ZNF726P1Q15940 193 aa8.73□□□□□ -1.01
VMP1-207ENST00000588131 ACOT6Q3I5F7 207 aaPredicted RBP8.73□□□□□ -1.01
VMP1-207ENST00000588131 C18orf65Q6ZTR6 163 aa8.73□□□□□ -1.01
VMP1-207ENST00000588131 SSX7Q7RTT5 188 aa8.73□□□□□ -1.01
VMP1-207ENST00000588131 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms