RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 SRRM4A7MD48 611 aaKnown RBP6.15□□□□□ -1.42
VMP1-204ENST00000587259 PRSS46E5RG02 174 aa6.15□□□□□ -1.42
VMP1-204ENST00000587259 RRHO14718 337 aa6.15□□□□□ -1.42
VMP1-204ENST00000587259 NBR2O15453 112 aa6.15□□□□□ -1.42
VMP1-204ENST00000587259 NDUFS6O75380 124 aaKnown RBP6.15□□□□□ -1.42
VMP1-204ENST00000587259 CA2P00918 260 aa6.15□□□□□ -1.42
VMP1-204ENST00000587259 FAM106CPP0CH98 169 aa6.15□□□□□ -1.42
VMP1-204ENST00000587259 PF4V1P10720 104 aa6.15□□□□□ -1.42
VMP1-204ENST00000587259 M6PRP20645 277 aa6.15□□□□□ -1.42
VMP1-204ENST00000587259 OPRK1P41145 380 aa6.15□□□□□ -1.42
VMP1-204ENST00000587259 RPL27AP46776 148 aaKnown RBP6.15□□□□□ -1.42
VMP1-204ENST00000587259 RUNX1Q01196 453 aa6.15□□□□□ -1.42
VMP1-204ENST00000587259 AKR1C1Q04828 323 aa6.15□□□□□ -1.42
VMP1-204ENST00000587259 ARL16Q0P5N6 197 aa6.15□□□□□ -1.42
VMP1-204ENST00000587259 PMS2P11Q13670 270 aa6.15□□□□□ -1.42
VMP1-204ENST00000587259 PSG5Q15238 335 aa6.15□□□□□ -1.42
VMP1-204ENST00000587259 SPINK9Q5DT21 86 aa6.15□□□□□ -1.42
VMP1-204ENST00000587259 NPBQ8NG41 125 aa6.15□□□□□ -1.42
VMP1-204ENST00000587259 OR5AU1Q8NGC0 362 aa6.15□□□□□ -1.42
VMP1-204ENST00000587259 SLC35E1Q96K37 410 aa6.15□□□□□ -1.42
VMP1-204ENST00000587259 METTL1Q9UBP6 276 aaKnown RBP6.15□□□□□ -1.42
VMP1-204ENST00000587259 KRTAP9-6A0A140TA67 174 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 CTXND1A0A1B0GTU2 59 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 NDUFA3O95167 84 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 MT-CO2P00403 227 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 PF4P02776 101 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 CRYGBP07316 175 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 RNASE2P10153 161 aaKnown RBP6.14□□□□□ -1.43
VMP1-204ENST00000587259 CD69Q07108 199 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 EBI3Q14213 229 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 DIAPH2-AS1Q14236 149 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 MMDQ15546 238 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 TNXAQ16473 311 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 KHDC1LQ5JSQ8 128 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 C18orf65Q6ZTR6 163 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 TMEM144Q7Z5S9 345 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 SVBPQ8N300 66 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 WFDC9Q8NEX5 89 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 MBD3L1Q8WWY6 194 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 RNF2Q99496 336 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 P2RX4Q99571 388 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 RSG1Q9BU20 258 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 SEC11CQ9BY50 192 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 ACTR3CQ9C0K3 210 aaPredicted RBP6.14□□□□□ -1.43
VMP1-204ENST00000587259 PRSS22Q9GZN4 317 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 EIF5A2Q9GZV4 153 aaKnown RBP6.14□□□□□ -1.43
VMP1-204ENST00000587259 TREM1Q9NP99 234 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 DNAH9Q9NYC9 4486 aa6.14□□□□□ -1.43
VMP1-204ENST00000587259 A0A1W2PPV4 95 aa6.13□□□□□ -1.43
VMP1-204ENST00000587259 TCRBV4S1A1TA0A5B7 111 aa6.13□□□□□ -1.43
VMP1-204ENST00000587259 TMEM218A2RU14 115 aa6.13□□□□□ -1.43
VMP1-204ENST00000587259 SCGB2A1O75556 95 aa6.13□□□□□ -1.43
VMP1-204ENST00000587259 IGKV1D-33P01593 117 aa6.13□□□□□ -1.43
VMP1-204ENST00000587259 IGKV1-33P01594 117 aa6.13□□□□□ -1.43
VMP1-204ENST00000587259 CD5P06127 495 aa6.13□□□□□ -1.43
VMP1-204ENST00000587259 RPL29P47914 159 aaKnown RBP6.13□□□□□ -1.43
VMP1-204ENST00000587259 SELENOTP62341 195 aa6.13□□□□□ -1.43
VMP1-204ENST00000587259 HES1Q14469 280 aa6.13□□□□□ -1.43
VMP1-204ENST00000587259 GUK1Q16774 197 aa6.13□□□□□ -1.43
VMP1-204ENST00000587259 KHDC3LQ587J8 217 aa6.13□□□□□ -1.43
VMP1-204ENST00000587259 FFAR4Q5NUL3 377 aa6.13□□□□□ -1.43
VMP1-204ENST00000587259 SLC16A13Q7RTY0 426 aa6.13□□□□□ -1.43
VMP1-204ENST00000587259 OR1P1Q8NH06 330 aa6.13□□□□□ -1.43
VMP1-204ENST00000587259 SUN5Q8TC36 379 aa6.13□□□□□ -1.43
VMP1-204ENST00000587259 SFT2D1Q8WV19 159 aa6.13□□□□□ -1.43
VMP1-204ENST00000587259 RCC1LQ96I51 464 aaKnown RBP6.13□□□□□ -1.43
VMP1-204ENST00000587259 WWC2-AS2Q96NR7 200 aa6.13□□□□□ -1.43
VMP1-204ENST00000587259 TXNDC17Q9BRA2 123 aa6.13□□□□□ -1.43
VMP1-204ENST00000587259 MANBALQ9NQG1 85 aa6.13□□□□□ -1.43
VMP1-204ENST00000587259 RPRMQ9NS64 109 aa6.13□□□□□ -1.43
VMP1-204ENST00000587259 SLC39A9Q9NUM3 307 aa6.13□□□□□ -1.43
VMP1-204ENST00000587259 CARHSP1Q9Y2V2 147 aaKnown RBP6.13□□□□□ -1.43
VMP1-204ENST00000587259 LSM4Q9Y4Z0 139 aaKnown RBP6.13□□□□□ -1.43
VMP1-204ENST00000587259 IGHV3-72A0A0B4J1Y9 119 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 IGLC7A0M8Q6 106 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 MAP1LC3B2A6NCE7 125 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 SEC14L6B5MCN3 397 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 F8W036 122 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 SNAPINO95295 136 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 CNIH1O95406 144 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 HSPB1P04792 205 aaKnown RBP6.12□□□□□ -1.43
VMP1-204ENST00000587259 FABP1P07148 127 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 OR13C7P0DN81 318 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 TMEM11P17152 192 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 CDC34P49427 236 aaPredicted RBP6.12□□□□□ -1.43
VMP1-204ENST00000587259 PSMB3P49720 205 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 ELLP55199 621 aaPredicted RBP6.12□□□□□ -1.43
VMP1-204ENST00000587259 RHOBP62745 196 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 HNF4GQ14541 408 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 C5orf64Q2M2E5 130 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 C10orf91Q5T1B1 145 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 PVRIGQ6DKI7 326 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 BPIFCQ8NFQ6 507 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 OR10G4Q8NGN3 311 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 OR10G9Q8NGN4 311 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 OR10G7Q8NGN6 311 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 SRSF12Q8WXF0 261 aaKnown RBP6.12□□□□□ -1.43
VMP1-204ENST00000587259 EAF1Q96JC9 268 aaPredicted RBP6.12□□□□□ -1.43
VMP1-204ENST00000587259 DUX3Q96PT4 197 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 PFDN5Q99471 154 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms