RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 OR4F17Q8NGA8 305 aa10.04□□□□□ -0.8
SMARCA4-208ENST00000585799 TMEM170AQ8WVE7 144 aa10.04□□□□□ -0.8
SMARCA4-208ENST00000585799 CACNG8Q8WXS5 425 aa10.04□□□□□ -0.8
SMARCA4-208ENST00000585799 NTF3P20783 257 aa10.04□□□□□ -0.8
SMARCA4-208ENST00000585799 CCL19Q99731 98 aa10.04□□□□□ -0.8
SMARCA4-208ENST00000585799 NDUFA4L2Q9NRX3 87 aa10.04□□□□□ -0.8
SMARCA4-208ENST00000585799 ABCA12Q86UK0 2595 aa10.04□□□□□ -0.8
SMARCA4-208ENST00000585799 PRB1P04280 392 aa10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 CR1LQ2VPA4 569 aa10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 TPTE2P1Q5T6R2 138 aa10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 SFRP2Q96HF1 295 aa10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 LINC00479Q96M42 142 aa10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 RNASE7Q9H1E1 156 aaKnown RBP10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 FNDC4Q9H6D8 234 aaPredicted RBP10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 S100A8P05109 93 aa10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 BRD3OSQ6XYD6 125 aa10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 TEX45Q8NA69 505 aa10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 IMMP2LQ96T52 175 aa10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 RNF2Q99496 336 aa10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 C1RLQ9NZP8 487 aa10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 THYN1Q9P016 225 aa10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 ATMQ13315 3056 aa10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 ZNF785A8K8V0 405 aa10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 HIST1H1BP16401 226 aaKnown RBP10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 PMS2P11Q13670 270 aa10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 RPEL1Q2QD12 228 aa10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 GFI1BQ5VTD9 330 aa10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 TMEM219Q86XT9 240 aa10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 TUBA4BQ9H853 241 aa10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 KAAG1Q9UBP8 84 aa10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 LAMA5O15230 3695 aa10.03□□□□□ -0.8
SMARCA4-208ENST00000585799 DCHS1Q96JQ0 3298 aa10.02□□□□□ -0.8
SMARCA4-208ENST00000585799 TMSB15BA0A087X1C1 80 aa10.02□□□□□ -0.8
SMARCA4-208ENST00000585799 IGHV3-66A0A0C4DH42 116 aa10.02□□□□□ -0.8
SMARCA4-208ENST00000585799 SNURFLB1AK76 121 aa10.02□□□□□ -0.8
SMARCA4-208ENST00000585799 PHOX2AO14813 284 aa10.02□□□□□ -0.8
SMARCA4-208ENST00000585799 IGHV2-70P01814 119 aa10.02□□□□□ -0.8
SMARCA4-208ENST00000585799 FAM106CPP0CH98 169 aa10.02□□□□□ -0.8
SMARCA4-208ENST00000585799 CBLN1P23435 193 aa10.02□□□□□ -0.8
SMARCA4-208ENST00000585799 LINC00518Q8N0U6 118 aa10.02□□□□□ -0.8
SMARCA4-208ENST00000585799 KDF1Q8NAX2 398 aaPredicted RBP10.02□□□□□ -0.8
SMARCA4-208ENST00000585799 RNASEH2CQ8TDP1 164 aaKnown RBP10.02□□□□□ -0.8
SMARCA4-208ENST00000585799 GRIFINA4D1Z8 144 aa10.02□□□□□ -0.81
SMARCA4-208ENST00000585799 ZNF207O43670 478 aaKnown RBP10.02□□□□□ -0.81
SMARCA4-208ENST00000585799 CA1P00915 261 aaPredicted RBP10.02□□□□□ -0.81
SMARCA4-208ENST00000585799 NBEAP1P0C6P0 100 aa10.02□□□□□ -0.81
SMARCA4-208ENST00000585799 PRNTQ86SH4 94 aa10.02□□□□□ -0.81
SMARCA4-208ENST00000585799 ZNF114Q8NC26 417 aa10.02□□□□□ -0.81
SMARCA4-208ENST00000585799 OR1L6Q8NGR2 347 aa10.02□□□□□ -0.81
SMARCA4-208ENST00000585799 SCRT1Q9BWW7 348 aa10.02□□□□□ -0.81
SMARCA4-208ENST00000585799 TCRBV4S1A1TA0A5B7 111 aa10.02□□□□□ -0.81
SMARCA4-208ENST00000585799 CXorf65A6NEN9 183 aa10.02□□□□□ -0.81
SMARCA4-208ENST00000585799 A0A087WWC5 75 aa10.01□□□□□ -0.81
SMARCA4-208ENST00000585799 USF2Q15853 346 aaPredicted RBP10.01□□□□□ -0.81
SMARCA4-208ENST00000585799 PRO1933Q9H354 126 aa10.01□□□□□ -0.81
SMARCA4-208ENST00000585799 VENTXO95231 258 aa10.01□□□□□ -0.81
SMARCA4-208ENST00000585799 GPX4P36969 197 aaPredicted RBP10.01□□□□□ -0.81
SMARCA4-208ENST00000585799 PDLIM4P50479 330 aa10.01□□□□□ -0.81
SMARCA4-208ENST00000585799 EFNA4P52798 201 aa10.01□□□□□ -0.81
SMARCA4-208ENST00000585799 PAX5Q02548 391 aa10.01□□□□□ -0.81
SMARCA4-208ENST00000585799 FAM168AQ92567 244 aa10.01□□□□□ -0.81
SMARCA4-208ENST00000585799 ASCL2Q99929 193 aa10.01□□□□□ -0.81
SMARCA4-208ENST00000585799 PARD6GQ9BYG4 376 aaPredicted RBP10.01□□□□□ -0.81
SMARCA4-208ENST00000585799 CSN1S1P47710 185 aa10.01□□□□□ -0.81
SMARCA4-208ENST00000585799 IBA57Q5T440 356 aaKnown RBP10.01□□□□□ -0.81
SMARCA4-208ENST00000585799 LINC01551Q86U37 167 aa10.01□□□□□ -0.81
SMARCA4-208ENST00000585799 OR4A5Q8NH83 315 aa10.01□□□□□ -0.81
SMARCA4-208ENST00000585799 SELENOKQ9Y6D0 94 aa10.01□□□□□ -0.81
SMARCA4-208ENST00000585799 CORTO00230 105 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 ARPC1AQ92747 370 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 IGKV1OR2-108A0A075B7D4 117 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 TGOLN2O43493 480 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 HIST1H2BKO60814 126 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 HIST1H2BJP06899 126 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 HIST1H2BOP23527 126 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 HIST1H2BBP33778 126 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 HIST1H2BDP58876 126 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 HIST1H2BCP62807 126 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 CX3CL1P78423 397 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 POU2AF1Q16633 256 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 HIST2H2BEQ16778 126 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 HIST2H2BFQ5QNW6 126 aaPredicted RBP10□□□□□ -0.81
SMARCA4-208ENST00000585799 MAPK1IP1LQ8NDC0 245 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 TNFRSF14Q92956 283 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 HIST1H2BHQ93079 126 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 HIST1H2BNQ99877 126 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 HIST1H2BMQ99879 126 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 OR2T8A6NH00 312 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 K7EQM0 130 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 PSG1P11464 419 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 ZNF137PP52743 207 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 MFAP2P55001 183 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 ATP5IP56385 69 aaPredicted RBP10□□□□□ -0.81
SMARCA4-208ENST00000585799 GOLT1AQ6ZVE7 132 aa10□□□□□ -0.81
SMARCA4-208ENST00000585799 SEC14L6B5MCN3 397 aa9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 AMY1AP04745 511 aa9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 PMCHP20382 165 aa9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 TXNDC17Q9BRA2 123 aa9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 MRPL36Q9P0J6 103 aaKnown RBP9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 A0A1B0GWJ7 208 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms