RNA–Protein interactions for RNA: ENST00000584476.1

MSI2-219, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-219	ENST00000584476		A0A1B0GV50	99 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	CYSRT1	A8MQ03	144 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	UMAD1	C9J7I0	102 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	C17orf112	F2Z3M2	114 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	TRIM77	I1YAP6	450 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476		M0QZK8	103 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	CORT	O00230	105 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	PLXNB1	O43157	2135 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	OR2J3	O76001	311 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	LINC00869	P0C866	280 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	GATA2	P23769	480 aa	Predicted RBP	4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	CRIP2	P52943	208 aa	Predicted RBP	4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	ZNF726P1	Q15940	193 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	NDUFA5	Q16718	116 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	AKIRIN2	Q53H80	203 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	TMEM41B	Q5BJD5	291 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	PXDC1	Q5TGL8	231 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	ETFRF1	Q6IPR1	90 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476		Q71RC1	249 aa	Predicted RBP	4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	SSX7	Q7RTT5	188 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	COMMD7	Q86VX2	200 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	STPG3	Q8N7X2	389 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	THAP8	Q8NA92	274 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	BPIFC	Q8NFQ6	507 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	OR1L6	Q8NGR2	347 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	LRRC20	Q8TCA0	184 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	SAT2	Q96F10	170 aa	Predicted RBP	4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	MS4A10	Q96PG2	267 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	HRH4	Q9H3N8	390 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	ZNF702P	Q9H963	129 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	SLC39A9	Q9NUM3	307 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	PLA2G2D	Q9UNK4	145 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	PXMP4	Q9Y6I8	212 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	CSMD2	Q7Z408	3487 aa		4.56	□□□□□ -1.68
MSI2-219	ENST00000584476	FASN	P49327	2511 aa	Known RBP	4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	NBPF19	A0A087WUL8	3843 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	UNC79	Q9P2D8	2635 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	HECTD1	Q9ULT8	2610 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	TRBV9	A0A0B4J1U6	114 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	TCRBV4S1A1T	A0A5B7	111 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	MFSD2B	A6NFX1	497 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	DNAJC9-AS1	A6NH13	148 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	ZFP92	A6NM28	416 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	ATP6V1G1	O75348	118 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	MPDU1	O75352	247 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	IGHV3-23	P01764	117 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	IGF1	P05019	195 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	CD99	P14209	185 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	HNF1A	P20823	631 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	RPL29	P47914	159 aa	Known RBP	4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	RAB5C	P51148	216 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	BLOC1S1	P78537	153 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	CCL20	P78556	96 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	RHOG	P84095	191 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	SERF2	P84101	59 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	CFHR3	Q02985	330 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	ZNF90	Q03938	601 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	ZNF616	Q08AN1	781 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	RAB31	Q13636	194 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	KLK9	Q2XQG4	91 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	TIGIT	Q495A1	244 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	SPATA31B1P	Q5VZV4	182 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	FAM122C	Q6P4D5	195 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	SPSB3	Q6PJ21	355 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	CYP2G1P	Q6ZSU1	146 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	RPP25L	Q8N5L8	163 aa	Known RBP	4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	TMEM116	Q8NCL8	245 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	OR10G4	Q8NGN3	311 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	OR10G9	Q8NGN4	311 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	OR10G7	Q8NGN6	311 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	OR4X1	Q8NH49	305 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	TMEM68	Q96MH6	324 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	TRGV9	Q99603	122 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	SLC25A22	Q9H936	323 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	ESM1	Q9NQ30	184 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	ZNF355P	Q9NSJ1	428 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	TMEM160	Q9NX00	188 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	KLK9	Q9UKQ9	250 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	TACC2	O95359	2948 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	ABCA1	O95477	2261 aa		4.55	□□□□□ -1.68
MSI2-219	ENST00000584476	AP4M1	O00189	453 aa		4.54	□□□□□ -1.68
MSI2-219	ENST00000584476	HMGB3	O15347	200 aa	Known RBP	4.54	□□□□□ -1.68
MSI2-219	ENST00000584476	CLN5	O75503	358 aa		4.54	□□□□□ -1.68
MSI2-219	ENST00000584476	IGKV1-17	P01599	117 aa		4.54	□□□□□ -1.68
MSI2-219	ENST00000584476	TRGV3	P03979	118 aa		4.54	□□□□□ -1.68
MSI2-219	ENST00000584476	IGLC1	P0CG04	106 aa		4.54	□□□□□ -1.68
MSI2-219	ENST00000584476	HIST1H1B	P16401	226 aa	Known RBP	4.54	□□□□□ -1.68
MSI2-219	ENST00000584476	M6PR	P20645	277 aa		4.54	□□□□□ -1.68
MSI2-219	ENST00000584476	PPIF	P30405	207 aa	Known RBP	4.54	□□□□□ -1.68
MSI2-219	ENST00000584476	FGF8	P55075	233 aa	Predicted RBP	4.54	□□□□□ -1.68
MSI2-219	ENST00000584476	B2M	P61769	119 aa		4.54	□□□□□ -1.68
MSI2-219	ENST00000584476	C15orf32	Q32M92	178 aa		4.54	□□□□□ -1.68
MSI2-219	ENST00000584476	ACOT6	Q3I5F7	207 aa	Predicted RBP	4.54	□□□□□ -1.68
MSI2-219	ENST00000584476		Q56UQ5	140 aa		4.54	□□□□□ -1.68
MSI2-219	ENST00000584476	C10orf99	Q6UWK7	81 aa		4.54	□□□□□ -1.68
MSI2-219	ENST00000584476	LCN15	Q6UWW0	184 aa		4.54	□□□□□ -1.68
MSI2-219	ENST00000584476	DPPA3	Q6W0C5	159 aa		4.54	□□□□□ -1.68
MSI2-219	ENST00000584476	RBMS3	Q6XE24	437 aa	Known RBP	4.54	□□□□□ -1.68
MSI2-219	ENST00000584476	TMEM86B	Q8N661	226 aa		4.54	□□□□□ -1.68
MSI2-219	ENST00000584476	LYPD6B	Q8NI32	183 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms