RNA–Protein interactions for RNA: ENST00000584337.5

CDH8-211, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-211ENST00000584337 RFESDQ8TAC1 157 aa8.49□□□□□ -1.05
CDH8-211ENST00000584337 OCIAD1Q9NX40 245 aa8.49□□□□□ -1.05
CDH8-211ENST00000584337 OBSL1O75147 1896 aa8.49□□□□□ -1.05
CDH8-211ENST00000584337 BRCA2P51587 3418 aa8.49□□□□□ -1.05
CDH8-211ENST00000584337 CT45A10P0DMU9 189 aa8.49□□□□□ -1.05
CDH8-211ENST00000584337 C20orf204Q6ZNR8 217 aa8.49□□□□□ -1.05
CDH8-211ENST00000584337 YRDCQ86U90 279 aaKnown RBP8.49□□□□□ -1.05
CDH8-211ENST00000584337 CACNG8Q8WXS5 425 aa8.49□□□□□ -1.05
CDH8-211ENST00000584337 CHAC1Q9BUX1 264 aa8.49□□□□□ -1.05
CDH8-211ENST00000584337 IGHV3-43A0A0B4J1X8 118 aa8.49□□□□□ -1.05
CDH8-211ENST00000584337 IGHV3-43DP0DP04 118 aa8.49□□□□□ -1.05
CDH8-211ENST00000584337 CRYGSP22914 178 aa8.49□□□□□ -1.05
CDH8-211ENST00000584337 FAM231DQ6ZW35 169 aa8.49□□□□□ -1.05
CDH8-211ENST00000584337 TMEM54Q969K7 222 aa8.49□□□□□ -1.05
CDH8-211ENST00000584337 TCF19Q9Y242 345 aa8.49□□□□□ -1.05
CDH8-211ENST00000584337 ARHGEF17Q96PE2 2063 aaPredicted RBP8.49□□□□□ -1.05
CDH8-211ENST00000584337 SPTY2D1-AS1A0A0U1RR47 76 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 SSBP2P81877 361 aaPredicted RBP8.48□□□□□ -1.05
CDH8-211ENST00000584337 RSPO1Q2MKA7 263 aaPredicted RBP8.48□□□□□ -1.05
CDH8-211ENST00000584337 ANXA2RQ3ZCQ2 193 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 TMEM178AQ8NBL3 297 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 OR10X1Q8NGY0 326 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 LINC00479Q96M42 142 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 ZNF747Q9BV97 191 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 RTL8AQ9BWD3 113 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 SPANXA1Q9NS26 97 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 TMEM140Q9NV12 185 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 LSM4Q9Y4Z0 139 aaKnown RBP8.48□□□□□ -1.05
CDH8-211ENST00000584337 MED12LQ86YW9 2145 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 KIAA1549Q9HCM3 1950 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 DOCK7Q96N67 2140 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 IGHV5-51A0A0C4DH38 117 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 C21orf140B9A014 251 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 EFNA2O43921 213 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 LINC00271P0C7V0 271 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 PPIFP30405 207 aaKnown RBP8.48□□□□□ -1.05
CDH8-211ENST00000584337 RPL30P62888 115 aaKnown RBP8.48□□□□□ -1.05
CDH8-211ENST00000584337 Q8IYB0 196 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 DEFB123Q8N688 67 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 PRELID3AQ96N28 172 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 NDFIP1Q9BT67 221 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 SIGLEC8Q9NYZ4 499 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 ABCA4P78363 2273 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 TRBV6-6A0A0A6YYG2 114 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 TRAV24A0A0B4J272 114 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 A0A1B0GX78 115 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 RPRMLQ8N4K4 120 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 GCSAMQ8N6F7 178 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 WDR31Q8NA23 367 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 OR1L4Q8NGR5 311 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 PLPPR2Q96GM1 343 aa8.48□□□□□ -1.05
CDH8-211ENST00000584337 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.47□□□□□ -1.05
CDH8-211ENST00000584337 TSPAN13O95857 204 aa8.47□□□□□ -1.05
CDH8-211ENST00000584337 ASPHD1Q5U4P2 390 aa8.47□□□□□ -1.05
CDH8-211ENST00000584337 ZNF562Q6V9R5 426 aa8.47□□□□□ -1.05
CDH8-211ENST00000584337 NABP1Q96AH0 204 aa8.47□□□□□ -1.05
CDH8-211ENST00000584337 IFI27L1Q96BM0 104 aa8.47□□□□□ -1.05
CDH8-211ENST00000584337 FAM110AQ9BQ89 295 aa8.47□□□□□ -1.05
CDH8-211ENST00000584337 GGTLC3B5MD39 225 aa8.47□□□□□ -1.05
CDH8-211ENST00000584337 MT-CO3P00414 261 aa8.47□□□□□ -1.05
CDH8-211ENST00000584337 MT-ATP8P03928 68 aa8.47□□□□□ -1.05
CDH8-211ENST00000584337 PSMB2P49721 201 aa8.47□□□□□ -1.05
CDH8-211ENST00000584337 INO80CQ6PI98 192 aaPredicted RBP8.47□□□□□ -1.05
CDH8-211ENST00000584337 ZNF837Q96EG3 531 aaPredicted RBP8.47□□□□□ -1.05
CDH8-211ENST00000584337 HS3ST6Q96QI5 342 aa8.47□□□□□ -1.05
CDH8-211ENST00000584337 PGPA6NDG6 321 aa8.47□□□□□ -1.05
CDH8-211ENST00000584337 NPIPB11E5RHQ5 1161 aa8.47□□□□□ -1.05
CDH8-211ENST00000584337 CRYGCP07315 174 aa8.47□□□□□ -1.05
CDH8-211ENST00000584337 CCL2P13500 99 aa8.47□□□□□ -1.05
CDH8-211ENST00000584337 COLCA1Q6ZS62 124 aa8.47□□□□□ -1.05
CDH8-211ENST00000584337 PCP2Q8IVA1 136 aa8.47□□□□□ -1.05
CDH8-211ENST00000584337 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.47□□□□□ -1.05
CDH8-211ENST00000584337 A0A1B0GUT8 65 aa8.46□□□□□ -1.05
CDH8-211ENST00000584337 OOEPA6NGQ2 149 aa8.46□□□□□ -1.05
CDH8-211ENST00000584337 PRSS29PA6NIE9 313 aa8.46□□□□□ -1.05
CDH8-211ENST00000584337 J3QT63 122 aa8.46□□□□□ -1.05
CDH8-211ENST00000584337 OR2H2O95918 312 aa8.46□□□□□ -1.05
CDH8-211ENST00000584337 GRPP07492 148 aa8.46□□□□□ -1.05
CDH8-211ENST00000584337 FXYD2P54710 66 aa8.46□□□□□ -1.05
CDH8-211ENST00000584337 RPL32P62910 135 aaKnown RBP8.46□□□□□ -1.05
CDH8-211ENST00000584337 LGALS9BQ3B8N2 356 aa8.46□□□□□ -1.05
CDH8-211ENST00000584337 GDF5OSQ5U4N7 250 aa8.46□□□□□ -1.05
CDH8-211ENST00000584337 LGALS9CQ6DKI2 356 aa8.46□□□□□ -1.05
CDH8-211ENST00000584337 RPS19BP1Q86WX3 136 aaKnown RBP8.46□□□□□ -1.05
CDH8-211ENST00000584337 DTX1Q86Y01 620 aa8.46□□□□□ -1.05
CDH8-211ENST00000584337 MRPL32Q9BYC8 188 aaKnown RBP8.46□□□□□ -1.05
CDH8-211ENST00000584337 UBTD1Q9HAC8 227 aa8.46□□□□□ -1.05
CDH8-211ENST00000584337 MPC1Q9Y5U8 109 aa8.46□□□□□ -1.05
CDH8-211ENST00000584337 A0A096LPE4 126 aa8.46□□□□□ -1.05
CDH8-211ENST00000584337 A0A1W2PPZ6 126 aa8.46□□□□□ -1.05
CDH8-211ENST00000584337 MRPL33O75394 65 aaKnown RBP8.46□□□□□ -1.05
CDH8-211ENST00000584337 C10orf113Q5VZT2 155 aa8.46□□□□□ -1.05
CDH8-211ENST00000584337 GTSF1Q8WW33 167 aa8.46□□□□□ -1.05
CDH8-211ENST00000584337 MAP1LC3AQ9H492 121 aa8.46□□□□□ -1.05
CDH8-211ENST00000584337 PGPEP1Q9NXJ5 209 aa8.46□□□□□ -1.05
CDH8-211ENST00000584337 LOXL2Q9Y4K0 774 aa8.46□□□□□ -1.05
CDH8-211ENST00000584337 HBDP02042 147 aa8.46□□□□□ -1.06
CDH8-211ENST00000584337 FOXI1Q12951 378 aa8.46□□□□□ -1.06
CDH8-211ENST00000584337 Q6ZSR3 168 aa8.46□□□□□ -1.06
CDH8-211ENST00000584337 PPDPFLQ8WWR9 84 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms