RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 PDCD5O14737 125 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 RTL8CO15255 209 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 RBFOX2O43251 390 aaKnown RBP eCLIP3.86□□□□□ -1.79
VAPA-207ENST00000583879 TNFSF12O43508 249 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 HPRT1P00492 218 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 CA1P00915 261 aaPredicted RBP3.86□□□□□ -1.79
VAPA-207ENST00000583879 CTSGP08311 255 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 FGF2P09038 288 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 TRAPPC2P0DI81 140 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 TRAPPC2BP0DI82 140 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 RBMY1A1P0DJD3 496 aaKnown RBP3.86□□□□□ -1.79
VAPA-207ENST00000583879 RBMY1CP0DJD4 496 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 OR13C7P0DN81 318 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 HLA-DMBP28068 263 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 RPS19P39019 145 aaKnown RBP3.86□□□□□ -1.79
VAPA-207ENST00000583879 OR10A3P58181 314 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 TAS2R31P59538 309 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 PAFAH1B2P68402 229 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 WT1-ASQ06250 92 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 MLLT11Q13015 90 aaPredicted RBP3.86□□□□□ -1.79
VAPA-207ENST00000583879 SMCO1Q147U7 214 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 RBMY1FQ15415 496 aaKnown RBP3.86□□□□□ -1.79
VAPA-207ENST00000583879 POU2AF1Q16633 256 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 HACD4Q5VWC8 232 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 PVRIGQ6DKI7 326 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 ZNF773Q6PK81 442 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 SPAG16Q8N0X2 631 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 GBGT1Q8N5D6 347 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 POM121L12Q8N7R1 296 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 GDPD1Q8N9F7 314 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 Q8NAQ8 132 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 UBAC2Q8NBM4 344 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 DGCR14Q96DF8 476 aaKnown RBP3.86□□□□□ -1.79
VAPA-207ENST00000583879 ZNF414Q96IQ9 312 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 OR10C1Q96KK4 312 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 RNF126Q9BV68 326 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 QTRT1Q9BXR0 403 aaKnown RBP3.86□□□□□ -1.79
VAPA-207ENST00000583879 ATG5Q9H1Y0 275 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 ACOT13Q9NPJ3 140 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 CCL28Q9NRJ3 127 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 SCN3BQ9NY72 215 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 ANXA10Q9UJ72 324 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 HECTD4Q9Y4D8 3996 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 IGHV3-49A0A0A0MS15 119 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 TRAV1-2A0A0B4J238 106 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 IGHV4-28A0A0C4DH34 117 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 FABP12A6NFH5 140 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 TMEM238C9JI98 176 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 K7EIM0 57 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 SULT1C2O00338 296 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 NUPL2O15504 423 aaKnown RBP3.85□□□□□ -1.79
VAPA-207ENST00000583879 YIF1AO95070 293 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 CD5P06127 495 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 GIG44P09565 113 aaPredicted RBP3.85□□□□□ -1.79
VAPA-207ENST00000583879 P0DMU3 169 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 FAM231AP0DMU4 169 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 FAM231CP0DMU5 169 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 MIFP14174 115 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 FCGR2CP31995 323 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 PPT1P50897 306 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 UCP3P55916 312 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 DEFB131AP59861 70 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 FGL1Q08830 312 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 MSMO1Q15800 293 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 RNF151Q2KHN1 245 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 LGALS9BQ3B8N2 356 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 Q56UQ5 140 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 Q6ZTC4 211 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 FAM219AQ8IW50 185 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 CENPSQ8N2Z9 138 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 DUSP18Q8NEJ0 188 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 DMBX1Q8NFW5 382 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 OR2D3Q8NGH3 330 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 SECTM1Q8WVN6 248 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 MGLLQ99685 303 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 CCDC90BQ9GZT6 254 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 DUSP21Q9H596 190 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 NDUFA4L2Q9NRX3 87 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 HSPB7Q9UBY9 170 aa3.85□□□□□ -1.79
VAPA-207ENST00000583879 F11RQ9Y624 299 aaKnown RBP3.85□□□□□ -1.79
VAPA-207ENST00000583879 ABCA13Q86UQ4 5058 aa3.84□□□□□ -1.79
VAPA-207ENST00000583879 IGHV3OR16-13A0A075B7E8 117 aa3.84□□□□□ -1.79
VAPA-207ENST00000583879 TRAV26-1A0A087WT03 109 aa3.84□□□□□ -1.79
VAPA-207ENST00000583879 DEFB131BA0A096LNP1 70 aa3.84□□□□□ -1.79
VAPA-207ENST00000583879 IGHV3-74A0A0B4J1X5 117 aa3.84□□□□□ -1.79
VAPA-207ENST00000583879 TRAV2A0A0B4J234 112 aa3.84□□□□□ -1.79
VAPA-207ENST00000583879 TMEM235A6NFC5 223 aa3.84□□□□□ -1.79
VAPA-207ENST00000583879 ZNF705EA8MWA4 302 aaPredicted RBP3.84□□□□□ -1.79
VAPA-207ENST00000583879 DNASE2O00115 360 aaPredicted RBP3.84□□□□□ -1.79
VAPA-207ENST00000583879 CTDSPLO15194 276 aa3.84□□□□□ -1.79
VAPA-207ENST00000583879 PPYP01298 95 aa3.84□□□□□ -1.79
VAPA-207ENST00000583879 RAB3BP20337 219 aa3.84□□□□□ -1.79
VAPA-207ENST00000583879 SEC61GP60059 68 aa3.84□□□□□ -1.79
VAPA-207ENST00000583879 CATR1Q13166 79 aa3.84□□□□□ -1.79
VAPA-207ENST00000583879 VWC2Q2TAL6 325 aa3.84□□□□□ -1.79
VAPA-207ENST00000583879 C12orf74Q32Q52 190 aa3.84□□□□□ -1.79
VAPA-207ENST00000583879 LBHQ53QV2 105 aaPredicted RBP3.84□□□□□ -1.79
VAPA-207ENST00000583879 LEMD1Q68G75 181 aa3.84□□□□□ -1.79
VAPA-207ENST00000583879 MORN3Q6PF18 240 aaPredicted RBP3.84□□□□□ -1.79
VAPA-207ENST00000583879 TCF24Q7RTU0 167 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms