RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 IAH1Q2TAA2 248 aaPredicted RBP1.33□□□□□ -2.2
SMARCE1-219ENST00000583294 DEFB115Q30KQ5 88 aa1.33□□□□□ -2.2
SMARCE1-219ENST00000583294 OBSCN-AS1Q96MR7 158 aa1.33□□□□□ -2.2
SMARCE1-219ENST00000583294 CEP192Q8TEP8 1941 aa1.32□□□□□ -2.2
SMARCE1-219ENST00000583294 CASP1P29466 404 aa1.32□□□□□ -2.2
SMARCE1-219ENST00000583294 YPEL3P61236 119 aaPredicted RBP1.32□□□□□ -2.2
SMARCE1-219ENST00000583294 RHOGP84095 191 aa1.32□□□□□ -2.2
SMARCE1-219ENST00000583294 PRB3Q04118 309 aaPredicted RBP1.32□□□□□ -2.2
SMARCE1-219ENST00000583294 RGS21Q2M5E4 152 aa1.32□□□□□ -2.2
SMARCE1-219ENST00000583294 OR6V1Q8N148 313 aa1.32□□□□□ -2.2
SMARCE1-219ENST00000583294 OR13D1Q8NGV5 346 aa1.32□□□□□ -2.2
SMARCE1-219ENST00000583294 MRPL57Q9BQC6 102 aaKnown RBP1.32□□□□□ -2.2
SMARCE1-219ENST00000583294 MYO3BQ8WXR4 1341 aa1.32□□□□□ -2.2
SMARCE1-219ENST00000583294 ZNF682O95780 498 aa1.31□□□□□ -2.2
SMARCE1-219ENST00000583294 OR4E1P0C645 316 aa1.31□□□□□ -2.2
SMARCE1-219ENST00000583294 SRSF6Q13247 344 aaKnown RBP1.31□□□□□ -2.2
SMARCE1-219ENST00000583294 C12orf45Q8N5I9 185 aaPredicted RBP1.31□□□□□ -2.2
SMARCE1-219ENST00000583294 SLC25A40Q8TBP6 338 aa1.31□□□□□ -2.2
SMARCE1-219ENST00000583294 WFDC5Q8TCV5 224 aa1.31□□□□□ -2.2
SMARCE1-219ENST00000583294 SFT2D1Q8WV19 159 aa1.31□□□□□ -2.2
SMARCE1-219ENST00000583294 IDI2-AS1Q9NZ38 188 aa1.31□□□□□ -2.2
SMARCE1-219ENST00000583294 GLTPQ9NZD2 209 aa1.31□□□□□ -2.2
SMARCE1-219ENST00000583294 SLC35A3Q9Y2D2 325 aa1.31□□□□□ -2.2
SMARCE1-219ENST00000583294 TRBV6-8A0A0A6YYG3 113 aa1.3□□□□□ -2.2
SMARCE1-219ENST00000583294 IGKV1-9A0A0C4DH69 117 aa1.3□□□□□ -2.2
SMARCE1-219ENST00000583294 TMEM114B3SHH9 223 aa1.3□□□□□ -2.2
SMARCE1-219ENST00000583294 PDE6DO43924 150 aa1.3□□□□□ -2.2
SMARCE1-219ENST00000583294 LYZL6O75951 148 aa1.3□□□□□ -2.2
SMARCE1-219ENST00000583294 OR51A2Q8NGJ7 313 aa1.3□□□□□ -2.2
SMARCE1-219ENST00000583294 ZFP30Q9Y2G7 519 aa1.3□□□□□ -2.2
SMARCE1-219ENST00000583294 PIK3C2GO75747 1445 aa1.3□□□□□ -2.2
SMARCE1-219ENST00000583294 SCN3AQ9NY46 2000 aa1.3□□□□□ -2.2
SMARCE1-219ENST00000583294 LOC110117498A0A087WWA1 95 aa1.29□□□□□ -2.2
SMARCE1-219ENST00000583294 A0A087X0T9 212 aa1.29□□□□□ -2.2
SMARCE1-219ENST00000583294 C19orf84I3L1E1 186 aa1.29□□□□□ -2.2
SMARCE1-219ENST00000583294 PPIBP23284 216 aaKnown RBP1.29□□□□□ -2.2
SMARCE1-219ENST00000583294 RHOBP62745 196 aa1.29□□□□□ -2.2
SMARCE1-219ENST00000583294 DEFB113Q30KQ7 82 aa1.29□□□□□ -2.2
SMARCE1-219ENST00000583294 TMEM97Q5BJF2 176 aa1.29□□□□□ -2.2
SMARCE1-219ENST00000583294 OR8D4Q8NGM9 314 aa1.29□□□□□ -2.2
SMARCE1-219ENST00000583294 ACER3Q9NUN7 267 aa1.29□□□□□ -2.2
SMARCE1-219ENST00000583294 EPDR1Q9UM22 224 aa1.29□□□□□ -2.2
SMARCE1-219ENST00000583294 UTP11Q9Y3A2 253 aaKnown RBP1.29□□□□□ -2.2
SMARCE1-219ENST00000583294 CCDC144AA2RUR9 1427 aa1.29□□□□□ -2.2
SMARCE1-219ENST00000583294 TNRC6AQ8NDV7 1962 aaKnown RBP1.28□□□□□ -2.2
SMARCE1-219ENST00000583294 TRAV12-1A0A0B4J245 112 aa1.28□□□□□ -2.2
SMARCE1-219ENST00000583294 PROSCO94903 275 aa1.28□□□□□ -2.2
SMARCE1-219ENST00000583294 SERPINE1P05121 402 aa1.28□□□□□ -2.2
SMARCE1-219ENST00000583294 C8GP07360 202 aa1.28□□□□□ -2.2
SMARCE1-219ENST00000583294 HIST1H3AP68431 136 aa1.28□□□□□ -2.2
SMARCE1-219ENST00000583294 H3F3AP84243 136 aa1.28□□□□□ -2.2
SMARCE1-219ENST00000583294 BRMS1LQ5PSV4 323 aa1.28□□□□□ -2.2
SMARCE1-219ENST00000583294 LCA10Q71F78 164 aa1.28□□□□□ -2.2
SMARCE1-219ENST00000583294 OR10J5Q8NHC4 309 aa1.28□□□□□ -2.2
SMARCE1-219ENST00000583294 ZNF418Q8TF45 676 aaPredicted RBP1.28□□□□□ -2.2
SMARCE1-219ENST00000583294 ADAT3Q96EY9 351 aaPredicted RBP1.28□□□□□ -2.2
SMARCE1-219ENST00000583294 C2orf50Q96LR7 162 aa1.28□□□□□ -2.2
SMARCE1-219ENST00000583294 HIST1H2BLQ99880 126 aa1.28□□□□□ -2.2
SMARCE1-219ENST00000583294 DOCK3Q8IZD9 2030 aa1.27□□□□□ -2.21
SMARCE1-219ENST00000583294 MED1Q15648 1581 aaPredicted RBP1.27□□□□□ -2.21
SMARCE1-219ENST00000583294 Q8N814 137 aa1.27□□□□□ -2.21
SMARCE1-219ENST00000583294 MNS1Q8NEH6 495 aa1.27□□□□□ -2.21
SMARCE1-219ENST00000583294 NHP2Q9NX24 153 aaKnown RBP1.27□□□□□ -2.21
SMARCE1-219ENST00000583294 SLC22A13Q9Y226 551 aa1.27□□□□□ -2.21
SMARCE1-219ENST00000583294 CYB5BO43169 146 aa1.26□□□□□ -2.21
SMARCE1-219ENST00000583294 HAND1O96004 215 aa1.26□□□□□ -2.21
SMARCE1-219ENST00000583294 CNBPP62633 177 aaKnown RBP1.26□□□□□ -2.21
SMARCE1-219ENST00000583294 TSNQ15631 228 aaKnown RBP1.26□□□□□ -2.21
SMARCE1-219ENST00000583294 Q6Q795 121 aa1.26□□□□□ -2.21
SMARCE1-219ENST00000583294 OR52L1Q8NGH7 329 aa1.26□□□□□ -2.21
SMARCE1-219ENST00000583294 TVP23BQ9NYZ1 205 aa1.26□□□□□ -2.21
SMARCE1-219ENST00000583294 FBXO5Q9UKT4 447 aa1.26□□□□□ -2.21
SMARCE1-219ENST00000583294 HS3ST2Q9Y278 367 aa1.26□□□□□ -2.21
SMARCE1-219ENST00000583294 TAF1LQ8IZX4 1826 aa1.26□□□□□ -2.21
SMARCE1-219ENST00000583294 NCOA1Q15788 1441 aa1.25□□□□□ -2.21
SMARCE1-219ENST00000583294 RTL1A6NKG5 1358 aa1.25□□□□□ -2.21
SMARCE1-219ENST00000583294 DENND4CQ5VZ89 1909 aa1.25□□□□□ -2.21
SMARCE1-219ENST00000583294 SBF1O95248 1867 aa1.25□□□□□ -2.21
SMARCE1-219ENST00000583294 C7orf71A4D174 169 aa1.25□□□□□ -2.21
SMARCE1-219ENST00000583294 CLDN25C9JDP6 229 aa1.25□□□□□ -2.21
SMARCE1-219ENST00000583294 SRIP30626 198 aa1.25□□□□□ -2.21
SMARCE1-219ENST00000583294 ESRGQ1W209 222 aa1.25□□□□□ -2.21
SMARCE1-219ENST00000583294 C1orf137Q5JT78 98 aa1.25□□□□□ -2.21
SMARCE1-219ENST00000583294 CLECL1Q8IZS7 167 aa1.25□□□□□ -2.21
SMARCE1-219ENST00000583294 C3orf56Q8N813 242 aa1.25□□□□□ -2.21
SMARCE1-219ENST00000583294 LINC00301Q8NCQ3 95 aa1.25□□□□□ -2.21
SMARCE1-219ENST00000583294 FAM172AQ8WUF8 416 aa1.25□□□□□ -2.21
SMARCE1-219ENST00000583294 SIGMAR1Q99720 223 aa1.25□□□□□ -2.21
SMARCE1-219ENST00000583294 C6orf62Q9GZU0 229 aaPredicted RBP1.25□□□□□ -2.21
SMARCE1-219ENST00000583294 CCDC160A6NGH7 325 aa1.24□□□□□ -2.21
SMARCE1-219ENST00000583294 SERPINB9P50453 376 aa1.24□□□□□ -2.21
SMARCE1-219ENST00000583294 CCL7P80098 99 aa1.24□□□□□ -2.21
SMARCE1-219ENST00000583294 SPA17Q15506 151 aa1.24□□□□□ -2.21
SMARCE1-219ENST00000583294 TEX261Q6UWH6 196 aa1.24□□□□□ -2.21
SMARCE1-219ENST00000583294 KIFC1Q9BW19 673 aa1.24□□□□□ -2.21
SMARCE1-219ENST00000583294 UCK1Q9HA47 277 aa1.24□□□□□ -2.21
SMARCE1-219ENST00000583294 RASL12Q9NYN1 266 aa1.24□□□□□ -2.21
SMARCE1-219ENST00000583294 U3KQ87 197 aa1.24□□□□□ -2.21
SMARCE1-219ENST00000583294 AP3S2P59780 193 aa1.23□□□□□ -2.21
SMARCE1-219ENST00000583294 OR2T10Q8NGZ9 312 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms