RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 TRAPPC2LH3BP13 241 aa1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 ORC5O43913 435 aa1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 MSMBP08118 114 aa1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 TRGC1P0CF51 173 aa1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 ZNF705BP0CI00 300 aaPredicted RBP1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 SULT1A3P0DMM9 295 aa1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 SULT1A4P0DMN0 295 aa1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 EVX1P49640 407 aa1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 PMAIP1Q13794 54 aa1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 DEFB115Q30KQ5 88 aa1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 HIST2H3PS2Q5TEC6 136 aa1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 HSPB9Q9BQS6 159 aa1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 NAA38Q9BRA0 125 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 RSL24D1Q9UHA3 163 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 IBTKQ9P2D0 1353 aaPredicted RBP1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 KDM3BQ7LBC6 1761 aa1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 SCN11AQ9UI33 1791 aa1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 AFDNP55196 1824 aaKnown RBP1.56□□□□□ -2.16
SMCHD1-205ENST00000581383 TRBV20OR9-2A0A075B6H5 130 aa1.56□□□□□ -2.16
SMCHD1-205ENST00000581383 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.56□□□□□ -2.16
SMCHD1-205ENST00000581383 TGIF2-C20orf24A0A0A6YYL0 155 aa1.56□□□□□ -2.16
SMCHD1-205ENST00000581383 A0A1B0GV50 99 aa1.56□□□□□ -2.16
SMCHD1-205ENST00000581383 KCNK1O00180 336 aa1.56□□□□□ -2.16
SMCHD1-205ENST00000581383 NOS1APO75052 506 aaPredicted RBP1.56□□□□□ -2.16
SMCHD1-205ENST00000581383 FGF6P10767 208 aa1.56□□□□□ -2.16
SMCHD1-205ENST00000581383 GUK1Q16774 197 aa1.56□□□□□ -2.16
SMCHD1-205ENST00000581383 KRTAP21-3Q3LHN1 58 aa1.56□□□□□ -2.16
SMCHD1-205ENST00000581383 CCDC122Q5T0U0 273 aa1.56□□□□□ -2.16
SMCHD1-205ENST00000581383 ALKAL1Q6UXT8 129 aa1.56□□□□□ -2.16
SMCHD1-205ENST00000581383 C7orf65Q6ZTY9 151 aa1.56□□□□□ -2.16
SMCHD1-205ENST00000581383 OR8J2Q8NGG1 315 aa1.56□□□□□ -2.16
SMCHD1-205ENST00000581383 SLC35B4Q969S0 331 aa1.56□□□□□ -2.16
SMCHD1-205ENST00000581383 CMTM6Q9NX76 183 aa1.56□□□□□ -2.16
SMCHD1-205ENST00000581383 IL36BQ9NZH7 164 aa1.56□□□□□ -2.16
SMCHD1-205ENST00000581383 SIPA1L3O60292 1781 aaPredicted RBP1.56□□□□□ -2.16
SMCHD1-205ENST00000581383 ARFGEF1Q9Y6D6 1849 aa1.56□□□□□ -2.16
SMCHD1-205ENST00000581383 ZNF609O15014 1411 aa1.56□□□□□ -2.16
SMCHD1-205ENST00000581383 COL1A1P02452 1464 aaPredicted RBP1.56□□□□□ -2.16
SMCHD1-205ENST00000581383 HELZ2Q9BYK8 2649 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-205ENST00000581383 LRRC37AA6NMS7 1700 aa1.55□□□□□ -2.16
SMCHD1-205ENST00000581383 MAST2Q6P0Q8 1798 aa1.55□□□□□ -2.16
SMCHD1-205ENST00000581383 MEIS3P1A6NDR6 274 aa1.55□□□□□ -2.16
SMCHD1-205ENST00000581383 EEF1E1-BLOC1S5C9J1V9 151 aa1.55□□□□□ -2.16
SMCHD1-205ENST00000581383 IGHV3-7P01780 117 aa1.55□□□□□ -2.16
SMCHD1-205ENST00000581383 CRPP02741 224 aa1.55□□□□□ -2.16
SMCHD1-205ENST00000581383 HIST1H1EP10412 219 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-205ENST00000581383 SPCS3P61009 180 aa1.55□□□□□ -2.16
SMCHD1-205ENST00000581383 GRK1Q15835 563 aa1.55□□□□□ -2.16
SMCHD1-205ENST00000581383 MOGQ16653 247 aa1.55□□□□□ -2.16
SMCHD1-205ENST00000581383 Q6ZSA8 131 aa1.55□□□□□ -2.16
SMCHD1-205ENST00000581383 DEFB119Q8N690 84 aa1.55□□□□□ -2.16
SMCHD1-205ENST00000581383 EFCAB1Q9HAE3 211 aa1.55□□□□□ -2.16
SMCHD1-205ENST00000581383 CISHQ9NSE2 258 aa1.55□□□□□ -2.16
SMCHD1-205ENST00000581383 MED23Q9ULK4 1368 aa1.55□□□□□ -2.16
SMCHD1-205ENST00000581383 HTTP42858 3142 aa1.55□□□□□ -2.16
SMCHD1-205ENST00000581383 ARFGEF2Q9Y6D5 1785 aa1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 FER1L6Q2WGJ9 1857 aa1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 BAZ2BQ9UIF8 2168 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 BRWD1Q9NSI6 2320 aa1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 MEIKINA0A087WXM9 373 aa1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 TRBV6-5A0A0K0K1A5 114 aa1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 OR51F1A6NGY5 319 aa1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 M0R036 132 aa1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 SLC22A1O15245 554 aa1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 AHSA1O95433 338 aa1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 ANP32AP39687 249 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 AKR1C3P42330 323 aa1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 IFITM2Q01629 132 aa1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 OR2F1Q13607 317 aa1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 HIST3H3Q16695 136 aa1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 ARHGAP11BQ3KRB8 267 aa1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 FAM173BQ6P4H8 233 aa1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 TMEM86BQ8N661 226 aa1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 ZNF565Q8N9K5 539 aa1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 Q96M85 177 aa1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 DDX60Q8IY21 1712 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 PAPPA2Q9BXP8 1791 aa1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 PCDH15Q96QU1 1955 aa1.54□□□□□ -2.16
SMCHD1-205ENST00000581383 LYPLA2O95372 231 aa1.53□□□□□ -2.16
SMCHD1-205ENST00000581383 C1QAP02745 245 aa1.53□□□□□ -2.16
SMCHD1-205ENST00000581383 S100A6P06703 90 aa1.53□□□□□ -2.16
SMCHD1-205ENST00000581383 OR5G3P0C626 314 aa1.53□□□□□ -2.16
SMCHD1-205ENST00000581383 EIF2B2P49770 351 aaKnown RBP1.53□□□□□ -2.16
SMCHD1-205ENST00000581383 RPL18Q07020 188 aaKnown RBP1.53□□□□□ -2.16
SMCHD1-205ENST00000581383 NNATQ16517 81 aa1.53□□□□□ -2.16
SMCHD1-205ENST00000581383 CCDC88AQ3V6T2 1871 aa1.53□□□□□ -2.16
SMCHD1-205ENST00000581383 FP248Q71RG6 208 aaPredicted RBP1.53□□□□□ -2.16
SMCHD1-205ENST00000581383 DCXRQ7Z4W1 244 aa1.53□□□□□ -2.16
SMCHD1-205ENST00000581383 C1orf158Q8N1D5 194 aa1.53□□□□□ -2.16
SMCHD1-205ENST00000581383 WDR61Q9GZS3 305 aaKnown RBP1.53□□□□□ -2.16
SMCHD1-205ENST00000581383 SBF1O95248 1867 aa1.52□□□□□ -2.17
SMCHD1-205ENST00000581383 LAMB2P55268 1798 aa1.52□□□□□ -2.17
SMCHD1-205ENST00000581383 TRBV10-2A0A0K0K1G8 114 aa1.52□□□□□ -2.17
SMCHD1-205ENST00000581383 PRM2P04554 102 aa1.52□□□□□ -2.17
SMCHD1-205ENST00000581383 Q6ZS49 121 aa1.52□□□□□ -2.17
SMCHD1-205ENST00000581383 MBD3L1Q8WWY6 194 aa1.52□□□□□ -2.17
SMCHD1-205ENST00000581383 RP1L1Q8IWN7 2480 aaPredicted RBP1.52□□□□□ -2.17
SMCHD1-205ENST00000581383 TNRC18O15417 2968 aaPredicted RBP1.52□□□□□ -2.17
SMCHD1-205ENST00000581383 VIRMAQ69YN4 1812 aaKnown RBP1.52□□□□□ -2.17
SMCHD1-205ENST00000581383 ANKRD36CQ5JPF3 1778 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms