RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 CXorf58Q96LI9 332 aa12□□□□□ -0.49
SS18-216ENST00000580751 BOLA1Q9Y3E2 137 aa12□□□□□ -0.49
SS18-216ENST00000580751 CCL24O00175 119 aa11.99□□□□□ -0.49
SS18-216ENST00000580751 FCGR2BP31994 310 aaPredicted RBP11.99□□□□□ -0.49
SS18-216ENST00000580751 OPRK1P41145 380 aa11.99□□□□□ -0.49
SS18-216ENST00000580751 RAB31Q13636 194 aa11.99□□□□□ -0.49
SS18-216ENST00000580751 DEFB136Q30KP8 78 aa11.99□□□□□ -0.49
SS18-216ENST00000580751 RPL7L1Q6DKI1 246 aaKnown RBP11.99□□□□□ -0.49
SS18-216ENST00000580751 ZNF343Q6P1L6 599 aa11.99□□□□□ -0.49
SS18-216ENST00000580751 SLC16A13Q7RTY0 426 aa11.99□□□□□ -0.49
SS18-216ENST00000580751 TMEM144Q7Z5S9 345 aa11.99□□□□□ -0.49
SS18-216ENST00000580751 TMEM116Q8NCL8 245 aa11.99□□□□□ -0.49
SS18-216ENST00000580751 VN1R17PQ8TDU5 208 aa11.99□□□□□ -0.49
SS18-216ENST00000580751 ST8SIA2Q92186 375 aa11.99□□□□□ -0.49
SS18-216ENST00000580751 EEF1AKMT3Q96AZ1 226 aa11.99□□□□□ -0.49
SS18-216ENST00000580751 BSCL2Q96G97 398 aaPredicted RBP11.99□□□□□ -0.49
SS18-216ENST00000580751 RAX2Q96IS3 184 aa11.99□□□□□ -0.49
SS18-216ENST00000580751 SLC35E1Q96K37 410 aa11.99□□□□□ -0.49
SS18-216ENST00000580751 GINS3Q9BRX5 216 aa11.99□□□□□ -0.49
SS18-216ENST00000580751 SMIM3Q9BZL3 60 aa11.99□□□□□ -0.49
SS18-216ENST00000580751 WFDC1Q9HC57 220 aa11.99□□□□□ -0.49
SS18-216ENST00000580751 KCNIP2Q9NS61 270 aa11.99□□□□□ -0.49
SS18-216ENST00000580751 WDR83OSQ9Y284 106 aa11.99□□□□□ -0.49
SS18-216ENST00000580751 DMRT1Q9Y5R6 373 aa11.99□□□□□ -0.49
SS18-216ENST00000580751 I3L2K1 104 aa11.98□□□□□ -0.49
SS18-216ENST00000580751 NDUFB8O95169 186 aa11.98□□□□□ -0.49
SS18-216ENST00000580751 SEC11BP0C7V7 166 aa11.98□□□□□ -0.49
SS18-216ENST00000580751 MFAP2P55001 183 aa11.98□□□□□ -0.49
SS18-216ENST00000580751 ZNF616Q08AN1 781 aa11.98□□□□□ -0.49
SS18-216ENST00000580751 FHL3Q13643 280 aa11.98□□□□□ -0.49
SS18-216ENST00000580751 OR11H1Q8NG94 326 aa11.98□□□□□ -0.49
SS18-216ENST00000580751 OR1N2Q8NGR9 330 aa11.98□□□□□ -0.49
SS18-216ENST00000580751 DPF1Q92782 380 aa11.98□□□□□ -0.49
SS18-216ENST00000580751 MISP3Q96FF7 219 aa11.98□□□□□ -0.49
SS18-216ENST00000580751 TXN2Q99757 166 aa11.98□□□□□ -0.49
SS18-216ENST00000580751 WDR61Q9GZS3 305 aaKnown RBP11.98□□□□□ -0.49
SS18-216ENST00000580751 GAR1Q9NY12 217 aaKnown RBP11.98□□□□□ -0.49
SS18-216ENST00000580751 TIMM9Q9Y5J7 89 aa11.98□□□□□ -0.49
SS18-216ENST00000580751 TRBV7-1A0A0A6YYK4 115 aa11.97□□□□□ -0.49
SS18-216ENST00000580751 LINC01619G3V211 115 aa11.97□□□□□ -0.49
SS18-216ENST00000580751 SCGB2A1O75556 95 aa11.97□□□□□ -0.49
SS18-216ENST00000580751 IFNA7P01567 189 aa11.97□□□□□ -0.49
SS18-216ENST00000580751 HSPB1P04792 205 aaKnown RBP11.97□□□□□ -0.49
SS18-216ENST00000580751 TEPPQ6URK8 271 aa11.97□□□□□ -0.49
SS18-216ENST00000580751 TEX261Q6UWH6 196 aa11.97□□□□□ -0.49
SS18-216ENST00000580751 TREML4Q6UXN2 200 aa11.97□□□□□ -0.49
SS18-216ENST00000580751 OR4X1Q8NH49 305 aa11.97□□□□□ -0.49
SS18-216ENST00000580751 DUX3Q96PT4 197 aa11.97□□□□□ -0.49
SS18-216ENST00000580751 PSMG3Q9BT73 122 aaPredicted RBP11.97□□□□□ -0.49
SS18-216ENST00000580751 PEF1Q9UBV8 284 aaKnown RBP11.97□□□□□ -0.49
SS18-216ENST00000580751 LSM4Q9Y4Z0 139 aaKnown RBP11.97□□□□□ -0.49
SS18-216ENST00000580751 IGHV4OR15-8A0A075B7B6 117 aa11.96□□□□□ -0.49
SS18-216ENST00000580751 TRAV30A0A087WSZ9 112 aa11.96□□□□□ -0.49
SS18-216ENST00000580751 A0A087WW49 117 aa11.96□□□□□ -0.49
SS18-216ENST00000580751 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.96□□□□□ -0.49
SS18-216ENST00000580751 MFSD2BA6NFX1 497 aa11.96□□□□□ -0.49
SS18-216ENST00000580751 C17orf112F2Z3M2 114 aa11.96□□□□□ -0.49
SS18-216ENST00000580751 K7EIM0 57 aa11.96□□□□□ -0.49
SS18-216ENST00000580751 MT-CO2P00403 227 aa11.96□□□□□ -0.49
SS18-216ENST00000580751 ZP3P21754 424 aa11.96□□□□□ -0.49
SS18-216ENST00000580751 SERF2P84101 59 aa11.96□□□□□ -0.49
SS18-216ENST00000580751 GAMTQ14353 236 aa11.96□□□□□ -0.49
SS18-216ENST00000580751 ZNF767PQ75MW2 155 aa11.96□□□□□ -0.49
SS18-216ENST00000580751 ZNF709Q8N972 641 aa11.96□□□□□ -0.49
SS18-216ENST00000580751 THAP8Q8NA92 274 aa11.96□□□□□ -0.49
SS18-216ENST00000580751 FNDC4Q9H6D8 234 aaPredicted RBP11.96□□□□□ -0.49
SS18-216ENST00000580751 UBE2L5PA0A1B0GUS4 154 aa11.95□□□□□ -0.5
SS18-216ENST00000580751 ANKRD34BA5PLL1 514 aa11.95□□□□□ -0.5
SS18-216ENST00000580751 SPP1P10451 314 aa11.95□□□□□ -0.5
SS18-216ENST00000580751 NPBWR1P48145 328 aa11.95□□□□□ -0.5
SS18-216ENST00000580751 MFAP4P55083 255 aa11.95□□□□□ -0.5
SS18-216ENST00000580751 SELENOTP62341 195 aa11.95□□□□□ -0.5
SS18-216ENST00000580751 AKR1C1Q04828 323 aa11.95□□□□□ -0.5
SS18-216ENST00000580751 LINC00482Q8N8I6 264 aa11.95□□□□□ -0.5
SS18-216ENST00000580751 OR2G3Q8NGZ4 309 aa11.95□□□□□ -0.5
SS18-216ENST00000580751 ZNF502Q8TBZ5 544 aa11.95□□□□□ -0.5
SS18-216ENST00000580751 LRRC20Q8TCA0 184 aa11.95□□□□□ -0.5
SS18-216ENST00000580751 CCDC140Q96MF4 163 aa11.95□□□□□ -0.5
SS18-216ENST00000580751 C21orf62Q9NYP8 219 aa11.95□□□□□ -0.5
SS18-216ENST00000580751 NOTCH3Q9UM47 2321 aa11.95□□□□□ -0.5
SS18-216ENST00000580751 UMAD1C9J7I0 102 aa11.94□□□□□ -0.5
SS18-216ENST00000580751 RGS13O14921 159 aa11.94□□□□□ -0.5
SS18-216ENST00000580751 IGHV3-23P01764 117 aa11.94□□□□□ -0.5
SS18-216ENST00000580751 FABP1P07148 127 aa11.94□□□□□ -0.5
SS18-216ENST00000580751 RAB5CP51148 216 aa11.94□□□□□ -0.5
SS18-216ENST00000580751 BTNL8Q6UX41 500 aa11.94□□□□□ -0.5
SS18-216ENST00000580751 ZNF680Q8NEM1 530 aa11.94□□□□□ -0.5
SS18-216ENST00000580751 SCARB1Q8WTV0 552 aa11.94□□□□□ -0.5
SS18-216ENST00000580751 S4R3C0 116 aa11.94□□□□□ -0.5
SS18-216ENST00000580751 NBEAL1Q6ZS30 2694 aa11.94□□□□□ -0.5
SS18-216ENST00000580751 SMCO3A2RU48 225 aa11.93□□□□□ -0.5
SS18-216ENST00000580751 CLN5O75503 358 aa11.93□□□□□ -0.5
SS18-216ENST00000580751 CFDP00746 253 aaPredicted RBP11.93□□□□□ -0.5
SS18-216ENST00000580751 TRBV12-3P01733 135 aa11.93□□□□□ -0.5
SS18-216ENST00000580751 MBP02144 154 aa11.93□□□□□ -0.5
SS18-216ENST00000580751 CD33P20138 364 aa11.93□□□□□ -0.5
SS18-216ENST00000580751 FGF7P21781 194 aa11.93□□□□□ -0.5
SS18-216ENST00000580751 ATP6V0CP27449 155 aa11.93□□□□□ -0.5
SS18-216ENST00000580751 HOXD3P31249 432 aaPredicted RBP11.93□□□□□ -0.5
SS18-216ENST00000580751 RPL29P47914 159 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms