RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 RPP25LQ8N5L8 163 aaKnown RBP4.98□□□□□ -1.61
COPS3-216ENST00000579716 LINC00337Q8N6G1 96 aa4.98□□□□□ -1.61
COPS3-216ENST00000579716 RBMXL1Q96E39 390 aaKnown RBP4.98□□□□□ -1.61
COPS3-216ENST00000579716 ZC2HC1AQ96GY0 325 aa4.98□□□□□ -1.61
COPS3-216ENST00000579716 SLC25A22Q9H936 323 aa4.98□□□□□ -1.61
COPS3-216ENST00000579716 ZNF222Q9UK12 451 aa4.98□□□□□ -1.61
COPS3-216ENST00000579716 INSL5Q9Y5Q6 135 aa4.98□□□□□ -1.61
COPS3-216ENST00000579716 LRRC9Q6ZRR7 1453 aa4.98□□□□□ -1.61
COPS3-216ENST00000579716 DIP2BQ9P265 1576 aa4.98□□□□□ -1.61
COPS3-216ENST00000579716 ATRNO75882 1429 aa4.97□□□□□ -1.61
COPS3-216ENST00000579716 LAMC1P11047 1609 aa4.97□□□□□ -1.61
COPS3-216ENST00000579716 TMEM131Q92545 1883 aa4.97□□□□□ -1.61
COPS3-216ENST00000579716 KIF1AQ12756 1690 aa4.97□□□□□ -1.61
COPS3-216ENST00000579716 ABCA8O94911 1581 aa4.97□□□□□ -1.61
COPS3-216ENST00000579716 IGHV6-1A0A0B4J1U7 121 aa4.97□□□□□ -1.61
COPS3-216ENST00000579716 A8MUN3 132 aa4.97□□□□□ -1.61
COPS3-216ENST00000579716 MCRIP1C9JLW8 97 aa4.97□□□□□ -1.61
COPS3-216ENST00000579716 C9JQL5 133 aa4.97□□□□□ -1.61
COPS3-216ENST00000579716 COX7A2LO14548 114 aa4.97□□□□□ -1.61
COPS3-216ENST00000579716 TPT1P13693 172 aaKnown RBP4.97□□□□□ -1.61
COPS3-216ENST00000579716 ERVK-16P61578 105 aa4.97□□□□□ -1.61
COPS3-216ENST00000579716 LGALS9BQ3B8N2 356 aa4.97□□□□□ -1.61
COPS3-216ENST00000579716 SPRNQ5BIV9 151 aa4.97□□□□□ -1.61
COPS3-216ENST00000579716 WDR38Q5JTN6 314 aa4.97□□□□□ -1.61
COPS3-216ENST00000579716 TEN1Q86WV5 123 aa4.97□□□□□ -1.61
COPS3-216ENST00000579716 APCDD1LQ8NCL9 501 aa4.97□□□□□ -1.61
COPS3-216ENST00000579716 ABHD14BQ96IU4 210 aa4.97□□□□□ -1.61
COPS3-216ENST00000579716 FAM218AQ96MZ4 157 aa4.97□□□□□ -1.61
COPS3-216ENST00000579716 SHANK2-AS3Q9BTD1 123 aa4.97□□□□□ -1.61
COPS3-216ENST00000579716 SPCS1Q9Y6A9 102 aa4.97□□□□□ -1.61
COPS3-216ENST00000579716 SCN4AP35499 1836 aa4.97□□□□□ -1.61
COPS3-216ENST00000579716 SPHKAPQ2M3C7 1700 aa4.97□□□□□ -1.61
COPS3-216ENST00000579716 SCN10AQ9Y5Y9 1956 aa4.96□□□□□ -1.61
COPS3-216ENST00000579716 THSD7AQ9UPZ6 1657 aa4.96□□□□□ -1.61
COPS3-216ENST00000579716 RALGAPA1Q6GYQ0 2036 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 PTPRFP10586 1907 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 LOXHD1Q8IVV2 1947 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 ZFP92A6NM28 416 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 OOSP1A8MZH6 123 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 H3BT86 120 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 K7N7A8 449 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 M0R129 80 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 PROSCO94903 275 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 CD3DP04234 171 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 FRMD6-AS1P0C7T7 363 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 SPATA45Q537H7 98 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 MUC21Q5SSG8 566 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 ZNF660Q6AZW8 331 aaPredicted RBP4.96□□□□□ -1.62
COPS3-216ENST00000579716 DPPA3Q6W0C5 159 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 LINC00596Q86U02 117 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 ZNF491Q8N8L2 437 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 WFDC11Q8NEX6 87 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 OR10AG1Q8NH19 301 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 GABARAPL3Q9BY60 117 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 NDUFB11Q9NX14 153 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 MOB4Q9Y3A3 225 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 PIK3C2BO00750 1634 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 SCN11AQ9UI33 1791 aa4.96□□□□□ -1.62
COPS3-216ENST00000579716 PARP14Q460N5 1801 aa4.95□□□□□ -1.62
COPS3-216ENST00000579716 PXDNQ92626 1479 aa4.95□□□□□ -1.62
COPS3-216ENST00000579716 MADDQ8WXG6 1647 aa4.95□□□□□ -1.62
COPS3-216ENST00000579716 DOCK5Q9H7D0 1870 aa4.95□□□□□ -1.62
COPS3-216ENST00000579716 TRBV27A0A0K0K1C4 114 aa4.95□□□□□ -1.62
COPS3-216ENST00000579716 LOC107986453A0A1B0GWG9 222 aa4.95□□□□□ -1.62
COPS3-216ENST00000579716 EPOPA6NHQ4 379 aa4.95□□□□□ -1.62
COPS3-216ENST00000579716 SYNGR2O43760 224 aa4.95□□□□□ -1.62
COPS3-216ENST00000579716 SSSCA1O60232 199 aa4.95□□□□□ -1.62
COPS3-216ENST00000579716 YPEL1O60688 119 aa4.95□□□□□ -1.62
COPS3-216ENST00000579716 FSTL3O95633 263 aa4.95□□□□□ -1.62
COPS3-216ENST00000579716 VDAC1P21796 283 aa4.95□□□□□ -1.62
COPS3-216ENST00000579716 MRPS36P82909 103 aaKnown RBP4.95□□□□□ -1.62
COPS3-216ENST00000579716 PMCHL1Q16048 86 aa4.95□□□□□ -1.62
COPS3-216ENST00000579716 BVES-AS1Q5T3Y7 98 aa4.95□□□□□ -1.62
COPS3-216ENST00000579716 YPEL2Q96QA6 119 aa4.95□□□□□ -1.62
COPS3-216ENST00000579716 SMDT1Q9H4I9 107 aa4.95□□□□□ -1.62
COPS3-216ENST00000579716 C16orf95Q9H693 158 aa4.95□□□□□ -1.62
COPS3-216ENST00000579716 PLEKHF2Q9H8W4 249 aa4.95□□□□□ -1.62
COPS3-216ENST00000579716 BCL2L10Q9HD36 194 aa4.95□□□□□ -1.62
COPS3-216ENST00000579716 SIX2Q9NPC8 291 aa4.95□□□□□ -1.62
COPS3-216ENST00000579716 IQGAP3Q86VI3 1631 aa4.94□□□□□ -1.62
COPS3-216ENST00000579716 SMCHD1A6NHR9 2005 aa4.94□□□□□ -1.62
COPS3-216ENST00000579716 PPLO60437 1756 aa4.94□□□□□ -1.62
COPS3-216ENST00000579716 IGHV3OR16-12A0A075B7B8 117 aa4.94□□□□□ -1.62
COPS3-216ENST00000579716 TRGV5A0A0B4J1U4 118 aa4.94□□□□□ -1.62
COPS3-216ENST00000579716 M0R378 163 aa4.94□□□□□ -1.62
COPS3-216ENST00000579716 GYPBP06028 91 aa4.94□□□□□ -1.62
COPS3-216ENST00000579716 SFTA3P0C7M3 94 aa4.94□□□□□ -1.62
COPS3-216ENST00000579716 ZNF286BP0CG31 522 aa4.94□□□□□ -1.62
COPS3-216ENST00000579716 COX7CP15954 63 aa4.94□□□□□ -1.62
COPS3-216ENST00000579716 BTCP35070 178 aa4.94□□□□□ -1.62
COPS3-216ENST00000579716 NPC2P61916 151 aa4.94□□□□□ -1.62
COPS3-216ENST00000579716 C11orf87Q6NUJ2 197 aa4.94□□□□□ -1.62
COPS3-216ENST00000579716 TMEM91Q6ZNR0 172 aa4.94□□□□□ -1.62
COPS3-216ENST00000579716 ZNF329Q86UD4 541 aa4.94□□□□□ -1.62
COPS3-216ENST00000579716 OR5H2Q8NGV7 314 aa4.94□□□□□ -1.62
COPS3-216ENST00000579716 DCANP1Q8TF63 244 aa4.94□□□□□ -1.62
COPS3-216ENST00000579716 TMEM158Q8WZ71 300 aa4.94□□□□□ -1.62
COPS3-216ENST00000579716 MUCL1Q96DR8 90 aa4.94□□□□□ -1.62
COPS3-216ENST00000579716 PMCHL2Q9BQD1 86 aa4.94□□□□□ -1.62
COPS3-216ENST00000579716 HDHD3Q9BSH5 251 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms