RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 NPIPB3Q92617 1050 aa7.58□□□□□ -1.2
MKS1-208ENST00000579358 SLC35E1Q96K37 410 aa7.58□□□□□ -1.2
MKS1-208ENST00000579358 SMIM8Q96KF7 97 aa7.58□□□□□ -1.2
MKS1-208ENST00000579358 C2orf50Q96LR7 162 aa7.58□□□□□ -1.2
MKS1-208ENST00000579358 RAB40CQ96S21 281 aa7.58□□□□□ -1.2
MKS1-208ENST00000579358 ZFAND3Q9H8U3 227 aa7.58□□□□□ -1.2
MKS1-208ENST00000579358 PSENENQ9NZ42 101 aa7.58□□□□□ -1.2
MKS1-208ENST00000579358 GSKIPQ9P0R6 139 aa7.58□□□□□ -1.2
MKS1-208ENST00000579358 MLXQ9UH92 298 aa7.58□□□□□ -1.2
MKS1-208ENST00000579358 RCL1Q9Y2P8 373 aaKnown RBP7.58□□□□□ -1.2
MKS1-208ENST00000579358 STRAPQ9Y3F4 350 aaKnown RBP7.58□□□□□ -1.2
MKS1-208ENST00000579358 PUS1Q9Y606 427 aaKnown RBP eCLIP7.58□□□□□ -1.2
MKS1-208ENST00000579358 NOTCH1P46531 2555 aa7.58□□□□□ -1.2
MKS1-208ENST00000579358 TRAV25A0A0B4J276 109 aa7.57□□□□□ -1.2
MKS1-208ENST00000579358 IGHV7-4-1A0A0J9YVY3 117 aa7.57□□□□□ -1.2
MKS1-208ENST00000579358 IZUMO1RA6ND01 250 aa7.57□□□□□ -1.2
MKS1-208ENST00000579358 FAM25EA8MYX2 175 aa7.57□□□□□ -1.2
MKS1-208ENST00000579358 H3BP45 60 aa7.57□□□□□ -1.2
MKS1-208ENST00000579358 TSC22D2O75157 780 aa7.57□□□□□ -1.2
MKS1-208ENST00000579358 SCGB1D2O95969 90 aa7.57□□□□□ -1.2
MKS1-208ENST00000579358 MBPP02686 304 aaPredicted RBP7.57□□□□□ -1.2
MKS1-208ENST00000579358 BMI1P35226 326 aa7.57□□□□□ -1.2
MKS1-208ENST00000579358 GAMTQ14353 236 aa7.57□□□□□ -1.2
MKS1-208ENST00000579358 TMEM61Q8N0U2 210 aa7.57□□□□□ -1.2
MKS1-208ENST00000579358 ACY3Q96HD9 319 aa7.57□□□□□ -1.2
MKS1-208ENST00000579358 SMPXQ9UHP9 88 aa7.57□□□□□ -1.2
MKS1-208ENST00000579358 PAIP2BQ9ULR5 123 aaKnown RBP7.57□□□□□ -1.2
MKS1-208ENST00000579358 SMAD5-AS1Q9Y6J3 95 aa7.57□□□□□ -1.2
MKS1-208ENST00000579358 PRKDCP78527 4128 aaKnown RBP7.57□□□□□ -1.2
MKS1-208ENST00000579358 IGHV3OR16-8A0A075B7F1 116 aa7.56□□□□□ -1.2
MKS1-208ENST00000579358 TRAV14DV4A0A0A6YYC5 116 aa7.56□□□□□ -1.2
MKS1-208ENST00000579358 ZNF785A8K8V0 405 aa7.56□□□□□ -1.2
MKS1-208ENST00000579358 ZNF207O43670 478 aaKnown RBP7.56□□□□□ -1.2
MKS1-208ENST00000579358 SCAF4O95104 1147 aaKnown RBP7.56□□□□□ -1.2
MKS1-208ENST00000579358 TOMM40O96008 361 aa7.56□□□□□ -1.2
MKS1-208ENST00000579358 PAX9P55771 341 aa7.56□□□□□ -1.2
MKS1-208ENST00000579358 IL15RAQ13261 267 aa7.56□□□□□ -1.2
MKS1-208ENST00000579358 TIGITQ495A1 244 aa7.56□□□□□ -1.2
MKS1-208ENST00000579358 DEFB121Q5J5C9 76 aa7.56□□□□□ -1.2
MKS1-208ENST00000579358 TMEM14EPQ6UXP3 125 aa7.56□□□□□ -1.2
MKS1-208ENST00000579358 GTSCR1Q86UQ5 136 aa7.56□□□□□ -1.2
MKS1-208ENST00000579358 Q8WTZ3 238 aa7.56□□□□□ -1.2
MKS1-208ENST00000579358 C7orf66A4D0T2 115 aa7.55□□□□□ -1.2
MKS1-208ENST00000579358 PMS2P5A8MQ11 134 aa7.55□□□□□ -1.2
MKS1-208ENST00000579358 A8MZ25 164 aa7.55□□□□□ -1.2
MKS1-208ENST00000579358 K7EPK0 472 aa7.55□□□□□ -1.2
MKS1-208ENST00000579358 CHEK1O14757 476 aa7.55□□□□□ -1.2
MKS1-208ENST00000579358 TSPAN4O14817 238 aa7.55□□□□□ -1.2
MKS1-208ENST00000579358 CD5P06127 495 aa7.55□□□□□ -1.2
MKS1-208ENST00000579358 FABP1P07148 127 aa7.55□□□□□ -1.2
MKS1-208ENST00000579358 LAMTOR1Q6IAA8 161 aa7.55□□□□□ -1.2
MKS1-208ENST00000579358 RBPMS2Q6ZRY4 209 aaKnown RBP7.55□□□□□ -1.2
MKS1-208ENST00000579358 Q8N1Y9 231 aa7.55□□□□□ -1.2
MKS1-208ENST00000579358 THAP8Q8NA92 274 aa7.55□□□□□ -1.2
MKS1-208ENST00000579358 WDR89Q96FK6 387 aaPredicted RBP7.55□□□□□ -1.2
MKS1-208ENST00000579358 METTL26Q96S19 204 aa7.55□□□□□ -1.2
MKS1-208ENST00000579358 SPAG8Q99932 426 aaPredicted RBP7.55□□□□□ -1.2
MKS1-208ENST00000579358 B9D2Q9BPU9 175 aa7.55□□□□□ -1.2
MKS1-208ENST00000579358 RHPN1-AS1Q9BWJ2 59 aa7.55□□□□□ -1.2
MKS1-208ENST00000579358 TMEM231Q9H6L2 316 aa7.55□□□□□ -1.2
MKS1-208ENST00000579358 VSIRQ9H7M9 311 aa7.55□□□□□ -1.2
MKS1-208ENST00000579358 IGKV1D-37A0A075B6S9 117 aa7.54□□□□□ -1.2
MKS1-208ENST00000579358 A0A1W2PS18 150 aa7.54□□□□□ -1.2
MKS1-208ENST00000579358 ZFP92A6NM28 416 aa7.54□□□□□ -1.2
MKS1-208ENST00000579358 FNDC10F2Z333 226 aa7.54□□□□□ -1.2
MKS1-208ENST00000579358 L7N2F9 121 aa7.54□□□□□ -1.2
MKS1-208ENST00000579358 GOSR2O14653 212 aa7.54□□□□□ -1.2
MKS1-208ENST00000579358 RD3LP0DJH9 198 aa7.54□□□□□ -1.2
MKS1-208ENST00000579358 PVALBP20472 110 aaPredicted RBP7.54□□□□□ -1.2
MKS1-208ENST00000579358 NPPCP23582 126 aa7.54□□□□□ -1.2
MKS1-208ENST00000579358 CRYBB3P26998 211 aa7.54□□□□□ -1.2
MKS1-208ENST00000579358 VAMP2P63027 116 aa7.54□□□□□ -1.2
MKS1-208ENST00000579358 DLK1P80370 383 aa7.54□□□□□ -1.2
MKS1-208ENST00000579358 RAB32Q13637 225 aa7.54□□□□□ -1.2
MKS1-208ENST00000579358 GUCA2BQ16661 112 aa7.54□□□□□ -1.2
MKS1-208ENST00000579358 ACOT7LQ6ZUV0 252 aa7.54□□□□□ -1.2
MKS1-208ENST00000579358 OR10P1Q8NGE3 313 aa7.54□□□□□ -1.2
MKS1-208ENST00000579358 OR51G1Q8NGK1 321 aa7.54□□□□□ -1.2
MKS1-208ENST00000579358 NARS2Q96I59 477 aaKnown RBP7.54□□□□□ -1.2
MKS1-208ENST00000579358 TRGV9Q99603 122 aa7.54□□□□□ -1.2
MKS1-208ENST00000579358 NMES1Q9C002 83 aa7.54□□□□□ -1.2
MKS1-208ENST00000579358 C11orf1Q9H5F2 150 aa7.54□□□□□ -1.2
MKS1-208ENST00000579358 LSM5Q9Y4Y9 91 aaKnown RBP7.54□□□□□ -1.2
MKS1-208ENST00000579358 CFDP00746 253 aaPredicted RBP7.53□□□□□ -1.2
MKS1-208ENST00000579358 IL4P05112 153 aa7.53□□□□□ -1.2
MKS1-208ENST00000579358 HNRNPCP07910 306 aaKnown RBP eCLIP7.53□□□□□ -1.2
MKS1-208ENST00000579358 METTL15P1P0C7V9 234 aa7.53□□□□□ -1.2
MKS1-208ENST00000579358 IGHV4-30-4P0DP06 118 aa7.53□□□□□ -1.2
MKS1-208ENST00000579358 PSG1P11464 419 aa7.53□□□□□ -1.2
MKS1-208ENST00000579358 CD81P60033 236 aa7.53□□□□□ -1.2
MKS1-208ENST00000579358 S100A10P60903 97 aa7.53□□□□□ -1.2
MKS1-208ENST00000579358 CYCSP99999 105 aaKnown RBP7.53□□□□□ -1.2
MKS1-208ENST00000579358 AKR1C1Q04828 323 aa7.53□□□□□ -1.2
MKS1-208ENST00000579358 USF2Q15853 346 aaPredicted RBP7.53□□□□□ -1.2
MKS1-208ENST00000579358 FAM90A2PQ658T7 463 aa7.53□□□□□ -1.2
MKS1-208ENST00000579358 OR8G2PQ6IF36 304 aa7.53□□□□□ -1.2
MKS1-208ENST00000579358 TMEM144Q7Z5S9 345 aa7.53□□□□□ -1.2
MKS1-208ENST00000579358 RNF2Q99496 336 aa7.53□□□□□ -1.2
MKS1-208ENST00000579358 NEURL2Q9BR09 285 aa7.53□□□□□ -1.2
MKS1-208ENST00000579358 GGACTQ9BVM4 153 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms