RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 SSX7Q7RTT5 188 aa11.37□□□□□ -0.59
CTDNEP1-211ENST00000575783 SLC35G3Q8N808 338 aa11.37□□□□□ -0.59
CTDNEP1-211ENST00000575783 Q8WTZ3 238 aa11.37□□□□□ -0.59
CTDNEP1-211ENST00000575783 MRGPRFQ96AM1 343 aa11.37□□□□□ -0.59
CTDNEP1-211ENST00000575783 KRTAP1-5Q9BYS1 174 aa11.37□□□□□ -0.59
CTDNEP1-211ENST00000575783 AUNIPQ9H7T9 357 aa11.37□□□□□ -0.59
CTDNEP1-211ENST00000575783 RRP15Q9Y3B9 282 aaKnown RBP11.37□□□□□ -0.59
CTDNEP1-211ENST00000575783 CORTO00230 105 aa11.36□□□□□ -0.59
CTDNEP1-211ENST00000575783 IGKV1-39P01597 117 aa11.36□□□□□ -0.59
CTDNEP1-211ENST00000575783 IGKV1D-39P04432 117 aa11.36□□□□□ -0.59
CTDNEP1-211ENST00000575783 RNASE2P10153 161 aaKnown RBP11.36□□□□□ -0.59
CTDNEP1-211ENST00000575783 BTF3P20290 206 aaKnown RBP11.36□□□□□ -0.59
CTDNEP1-211ENST00000575783 CBX5P45973 191 aa11.36□□□□□ -0.59
CTDNEP1-211ENST00000575783 PRSS48Q7RTY5 328 aa11.36□□□□□ -0.59
CTDNEP1-211ENST00000575783 TMEM208Q9BTX3 173 aa11.36□□□□□ -0.59
CTDNEP1-211ENST00000575783 MAGT1Q9H0U3 335 aa11.36□□□□□ -0.59
CTDNEP1-211ENST00000575783 SAV1Q9H4B6 383 aaPredicted RBP11.36□□□□□ -0.59
CTDNEP1-211ENST00000575783 IFT46Q9NQC8 304 aa11.36□□□□□ -0.59
CTDNEP1-211ENST00000575783 NDUFB11Q9NX14 153 aa11.36□□□□□ -0.59
CTDNEP1-211ENST00000575783 TRAV30A0A087WSZ9 112 aa11.35□□□□□ -0.59
CTDNEP1-211ENST00000575783 J3QL48 77 aa11.35□□□□□ -0.59
CTDNEP1-211ENST00000575783 ALDH3B2P48448 385 aa11.35□□□□□ -0.59
CTDNEP1-211ENST00000575783 PSG9Q00887 426 aa11.35□□□□□ -0.59
CTDNEP1-211ENST00000575783 DHODHQ02127 395 aa11.35□□□□□ -0.59
CTDNEP1-211ENST00000575783 OR5H6Q8NGV6 325 aa11.35□□□□□ -0.59
CTDNEP1-211ENST00000575783 FXYD6Q9H0Q3 95 aa11.35□□□□□ -0.59
CTDNEP1-211ENST00000575783 PTTG2Q9NZH5 202 aa11.35□□□□□ -0.59
CTDNEP1-211ENST00000575783 MDFICQ9P1T7 246 aa11.35□□□□□ -0.59
CTDNEP1-211ENST00000575783 M0QYG6 137 aa11.34□□□□□ -0.59
CTDNEP1-211ENST00000575783 PRM2P04554 102 aa11.34□□□□□ -0.59
CTDNEP1-211ENST00000575783 ETV6P41212 452 aa11.34□□□□□ -0.59
CTDNEP1-211ENST00000575783 USF2Q15853 346 aaPredicted RBP11.34□□□□□ -0.59
CTDNEP1-211ENST00000575783 TTC32Q5I0X7 151 aa11.34□□□□□ -0.59
CTDNEP1-211ENST00000575783 SFXN4Q6P4A7 337 aa11.34□□□□□ -0.59
CTDNEP1-211ENST00000575783 FOXI2Q6ZQN5 318 aa11.34□□□□□ -0.59
CTDNEP1-211ENST00000575783 TBC1D26Q86UD7 250 aa11.34□□□□□ -0.59
CTDNEP1-211ENST00000575783 OR6F1Q8NGZ6 308 aa11.34□□□□□ -0.59
CTDNEP1-211ENST00000575783 SLC25A38Q96DW6 304 aa11.34□□□□□ -0.59
CTDNEP1-211ENST00000575783 BUB3O43684 328 aa11.33□□□□□ -0.6
CTDNEP1-211ENST00000575783 SMR3BP02814 79 aaPredicted RBP11.33□□□□□ -0.6
CTDNEP1-211ENST00000575783 IL4P05112 153 aa11.33□□□□□ -0.6
CTDNEP1-211ENST00000575783 S100GP29377 79 aa11.33□□□□□ -0.6
CTDNEP1-211ENST00000575783 RNF141Q8WVD5 230 aa11.33□□□□□ -0.6
CTDNEP1-211ENST00000575783 UHRF2Q96PU4 802 aa11.33□□□□□ -0.6
CTDNEP1-211ENST00000575783 VCXQ9H320 206 aa11.33□□□□□ -0.6
CTDNEP1-211ENST00000575783 DIABLOQ9NR28 239 aa11.33□□□□□ -0.6
CTDNEP1-211ENST00000575783 FAM212BQ9NTI7 297 aaPredicted RBP11.33□□□□□ -0.6
CTDNEP1-211ENST00000575783 PGPEP1Q9NXJ5 209 aa11.33□□□□□ -0.6
CTDNEP1-211ENST00000575783 LYRM9A8MSI8 78 aa11.32□□□□□ -0.6
CTDNEP1-211ENST00000575783 ZNF705GA8MUZ8 300 aaPredicted RBP11.32□□□□□ -0.6
CTDNEP1-211ENST00000575783 F6UB75 175 aa11.32□□□□□ -0.6
CTDNEP1-211ENST00000575783 IGLC1P0CG04 106 aa11.32□□□□□ -0.6
CTDNEP1-211ENST00000575783 OR10J1P30954 320 aa11.32□□□□□ -0.6
CTDNEP1-211ENST00000575783 ID1P41134 155 aa11.32□□□□□ -0.6
CTDNEP1-211ENST00000575783 RPL5P46777 297 aaKnown RBP11.32□□□□□ -0.6
CTDNEP1-211ENST00000575783 RORCP51449 518 aa11.32□□□□□ -0.6
CTDNEP1-211ENST00000575783 FCN2Q15485 313 aa11.32□□□□□ -0.6
CTDNEP1-211ENST00000575783 FAM78BQ5VT40 261 aa11.32□□□□□ -0.6
CTDNEP1-211ENST00000575783 OR1S2Q8NGQ3 325 aa11.32□□□□□ -0.6
CTDNEP1-211ENST00000575783 OR5H2Q8NGV7 314 aa11.32□□□□□ -0.6
CTDNEP1-211ENST00000575783 COQ8AQ8NI60 647 aa11.32□□□□□ -0.6
CTDNEP1-211ENST00000575783 CLUHP3Q96NS8 147 aa11.32□□□□□ -0.6
CTDNEP1-211ENST00000575783 PDCD10Q9BUL8 212 aa11.32□□□□□ -0.6
CTDNEP1-211ENST00000575783 WDR12Q9GZL7 423 aaKnown RBP11.32□□□□□ -0.6
CTDNEP1-211ENST00000575783 SCPEP1Q9HB40 452 aa11.32□□□□□ -0.6
CTDNEP1-211ENST00000575783 ENY2Q9NPA8 101 aa11.32□□□□□ -0.6
CTDNEP1-211ENST00000575783 TXNL4BQ9NX01 149 aaKnown RBP11.32□□□□□ -0.6
CTDNEP1-211ENST00000575783 A0A0B4J293 547 aa11.31□□□□□ -0.6
CTDNEP1-211ENST00000575783 INS-IGF2F8WCM5 200 aa11.31□□□□□ -0.6
CTDNEP1-211ENST00000575783 RND2P52198 227 aa11.31□□□□□ -0.6
CTDNEP1-211ENST00000575783 YPEL3P61236 119 aaPredicted RBP11.31□□□□□ -0.6
CTDNEP1-211ENST00000575783 ZNF79Q15937 498 aa11.31□□□□□ -0.6
CTDNEP1-211ENST00000575783 EBLN2Q6P2I7 272 aa11.31□□□□□ -0.6
CTDNEP1-211ENST00000575783 Q9H3A6 140 aa11.31□□□□□ -0.6
CTDNEP1-211ENST00000575783 KLK11Q9UBX7 282 aa11.31□□□□□ -0.6
CTDNEP1-211ENST00000575783 A0A0A6YYH2 397 aa11.3□□□□□ -0.6
CTDNEP1-211ENST00000575783 A6NJ64 397 aa11.3□□□□□ -0.6
CTDNEP1-211ENST00000575783 GSTZ1O43708 216 aaPredicted RBP11.3□□□□□ -0.6
CTDNEP1-211ENST00000575783 ATP5G1P05496 136 aa11.3□□□□□ -0.6
CTDNEP1-211ENST00000575783 ATP5G3P48201 142 aa11.3□□□□□ -0.6
CTDNEP1-211ENST00000575783 TAS2R20P59543 309 aa11.3□□□□□ -0.6
CTDNEP1-211ENST00000575783 MXD1Q05195 221 aa11.3□□□□□ -0.6
CTDNEP1-211ENST00000575783 TBCEQ15813 527 aaPredicted RBP11.3□□□□□ -0.6
CTDNEP1-211ENST00000575783 IDNKQ5T6J7 187 aa11.3□□□□□ -0.6
CTDNEP1-211ENST00000575783 RD3LP0DJH9 198 aa11.29□□□□□ -0.6
CTDNEP1-211ENST00000575783 TAS2R46P59540 309 aa11.29□□□□□ -0.6
CTDNEP1-211ENST00000575783 SPATA31B1PQ5VZV4 182 aa11.29□□□□□ -0.6
CTDNEP1-211ENST00000575783 LPCAT3Q6P1A2 487 aa11.29□□□□□ -0.6
CTDNEP1-211ENST00000575783 PRSS54Q6PEW0 395 aa11.29□□□□□ -0.6
CTDNEP1-211ENST00000575783 OR4C16Q8NGL9 310 aa11.29□□□□□ -0.6
CTDNEP1-211ENST00000575783 ZNF586Q9NXT0 402 aa11.29□□□□□ -0.6
CTDNEP1-211ENST00000575783 HMCN2Q8NDA2 5059 aa11.29□□□□□ -0.6
CTDNEP1-211ENST00000575783 IGKV1-5P01602 117 aa11.28□□□□□ -0.6
CTDNEP1-211ENST00000575783 CLEC2LP0C7M8 214 aa11.28□□□□□ -0.6
CTDNEP1-211ENST00000575783 SDC2P34741 201 aa11.28□□□□□ -0.6
CTDNEP1-211ENST00000575783 HSPA13P48723 471 aa11.28□□□□□ -0.6
CTDNEP1-211ENST00000575783 PSMB3P49720 205 aa11.28□□□□□ -0.6
CTDNEP1-211ENST00000575783 TSPAN5P62079 268 aa11.28□□□□□ -0.6
CTDNEP1-211ENST00000575783 OR51G1Q8NGK1 321 aa11.28□□□□□ -0.6
CTDNEP1-211ENST00000575783 IGF2BP2-AS1Q96M15 143 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms