RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 FCGR1BQ92637 280 aa6.38□□□□□ -1.39
SMG6-218ENST00000575454 MRGPRFQ96AM1 343 aa6.38□□□□□ -1.39
SMG6-218ENST00000575454 CLUHP3Q96NS8 147 aa6.38□□□□□ -1.39
SMG6-218ENST00000575454 ANAPC10Q9UM13 185 aa6.38□□□□□ -1.39
SMG6-218ENST00000575454 MEIS3P1A6NDR6 274 aa6.37□□□□□ -1.39
SMG6-218ENST00000575454 IGKV1-39P01597 117 aa6.37□□□□□ -1.39
SMG6-218ENST00000575454 IGKV1D-39P04432 117 aa6.37□□□□□ -1.39
SMG6-218ENST00000575454 RNASE2P10153 161 aaKnown RBP6.37□□□□□ -1.39
SMG6-218ENST00000575454 NAT1P18440 290 aa6.37□□□□□ -1.39
SMG6-218ENST00000575454 PSMB9P28065 219 aa6.37□□□□□ -1.39
SMG6-218ENST00000575454 ID1P41134 155 aa6.37□□□□□ -1.39
SMG6-218ENST00000575454 CCL18P55774 89 aa6.37□□□□□ -1.39
SMG6-218ENST00000575454 UCP3P55916 312 aa6.37□□□□□ -1.39
SMG6-218ENST00000575454 YPEL3P61236 119 aaPredicted RBP6.37□□□□□ -1.39
SMG6-218ENST00000575454 DAD1P61803 113 aa6.37□□□□□ -1.39
SMG6-218ENST00000575454 TSPAN5P62079 268 aa6.37□□□□□ -1.39
SMG6-218ENST00000575454 TIGITQ495A1 244 aa6.37□□□□□ -1.39
SMG6-218ENST00000575454 SPINK9Q5DT21 86 aa6.37□□□□□ -1.39
SMG6-218ENST00000575454 SIGLEC15Q6ZMC9 328 aa6.37□□□□□ -1.39
SMG6-218ENST00000575454 C7orf50Q9BRJ6 194 aaKnown RBP6.37□□□□□ -1.39
SMG6-218ENST00000575454 FXYD6Q9H0Q3 95 aa6.37□□□□□ -1.39
SMG6-218ENST00000575454 A0A0B4J293 547 aa6.36□□□□□ -1.39
SMG6-218ENST00000575454 LOC102723971A0A1B0GUV8 181 aa6.36□□□□□ -1.39
SMG6-218ENST00000575454 BUB3O43684 328 aa6.36□□□□□ -1.39
SMG6-218ENST00000575454 IGLC1P0CG04 106 aa6.36□□□□□ -1.39
SMG6-218ENST00000575454 SLC25A4P12235 298 aa6.36□□□□□ -1.39
SMG6-218ENST00000575454 OR10J1P30954 320 aa6.36□□□□□ -1.39
SMG6-218ENST00000575454 PRSS3P35030 304 aa6.36□□□□□ -1.39
SMG6-218ENST00000575454 HRH1P35367 487 aa6.36□□□□□ -1.39
SMG6-218ENST00000575454 HTR2BP41595 481 aa6.36□□□□□ -1.39
SMG6-218ENST00000575454 AKR1C2P52895 323 aa6.36□□□□□ -1.39
SMG6-218ENST00000575454 TAS2R20P59543 309 aa6.36□□□□□ -1.39
SMG6-218ENST00000575454 GABARAPL2P60520 117 aa6.36□□□□□ -1.39
SMG6-218ENST00000575454 DHODHQ02127 395 aa6.36□□□□□ -1.39
SMG6-218ENST00000575454 MXD1Q05195 221 aa6.36□□□□□ -1.39
SMG6-218ENST00000575454 RRN3P1Q2M238 152 aa6.36□□□□□ -1.39
SMG6-218ENST00000575454 SAMD13Q5VXD3 122 aa6.36□□□□□ -1.39
SMG6-218ENST00000575454 FOXI2Q6ZQN5 318 aa6.36□□□□□ -1.39
SMG6-218ENST00000575454 SPATA12Q7Z6I5 190 aa6.36□□□□□ -1.39
SMG6-218ENST00000575454 CROCCP3Q8IVE0 287 aa6.36□□□□□ -1.39
SMG6-218ENST00000575454 ZNRF2Q8NHG8 242 aa6.36□□□□□ -1.39
SMG6-218ENST00000575454 VCX3BQ9H321 246 aa6.36□□□□□ -1.39
SMG6-218ENST00000575454 SAV1Q9H4B6 383 aaPredicted RBP6.36□□□□□ -1.39
SMG6-218ENST00000575454 FNDC4Q9H6D8 234 aaPredicted RBP6.36□□□□□ -1.39
SMG6-218ENST00000575454 SCPEP1Q9HB40 452 aa6.36□□□□□ -1.39
SMG6-218ENST00000575454 YTHDF2Q9Y5A9 579 aaKnown RBP6.36□□□□□ -1.39
SMG6-218ENST00000575454 LYRM9A8MSI8 78 aa6.35□□□□□ -1.39
SMG6-218ENST00000575454 EPM2AB3EWF7 344 aa6.35□□□□□ -1.39
SMG6-218ENST00000575454 IGKV3-20P01619 116 aa6.35□□□□□ -1.39
SMG6-218ENST00000575454 IL4P05112 153 aa6.35□□□□□ -1.39
SMG6-218ENST00000575454 RD3LP0DJH9 198 aa6.35□□□□□ -1.39
SMG6-218ENST00000575454 HLA-DMAP28067 261 aa6.35□□□□□ -1.39
SMG6-218ENST00000575454 ETV6P41212 452 aa6.35□□□□□ -1.39
SMG6-218ENST00000575454 PSG9Q00887 426 aa6.35□□□□□ -1.39
SMG6-218ENST00000575454 BSXQ3C1V8 233 aa6.35□□□□□ -1.39
SMG6-218ENST00000575454 TMEM69Q5SWH9 247 aa6.35□□□□□ -1.39
SMG6-218ENST00000575454 ETFRF1Q6IPR1 90 aa6.35□□□□□ -1.39
SMG6-218ENST00000575454 EBLN2Q6P2I7 272 aa6.35□□□□□ -1.39
SMG6-218ENST00000575454 RNASEH2CQ8TDP1 164 aaKnown RBP6.35□□□□□ -1.39
SMG6-218ENST00000575454 RRNAD1Q96FB5 475 aaKnown RBP6.35□□□□□ -1.39
SMG6-218ENST00000575454 ZNF486Q96H40 463 aaPredicted RBP6.35□□□□□ -1.39
SMG6-218ENST00000575454 LINC00052Q96N35 136 aa6.35□□□□□ -1.39
SMG6-218ENST00000575454 MRPL36Q9P0J6 103 aaKnown RBP6.35□□□□□ -1.39
SMG6-218ENST00000575454 IGKV1-5P01602 117 aa6.34□□□□□ -1.39
SMG6-218ENST00000575454 CLEC2LP0C7M8 214 aa6.34□□□□□ -1.39
SMG6-218ENST00000575454 BTF3P20290 206 aaKnown RBP6.34□□□□□ -1.39
SMG6-218ENST00000575454 PSMB3P49720 205 aa6.34□□□□□ -1.39
SMG6-218ENST00000575454 SPCS3P61009 180 aa6.34□□□□□ -1.39
SMG6-218ENST00000575454 RND3P61587 244 aa6.34□□□□□ -1.39
SMG6-218ENST00000575454 USF2Q15853 346 aaPredicted RBP6.34□□□□□ -1.39
SMG6-218ENST00000575454 MLANAQ16655 118 aa6.34□□□□□ -1.39
SMG6-218ENST00000575454 TTC32Q5I0X7 151 aa6.34□□□□□ -1.39
SMG6-218ENST00000575454 UBE2NLQ5JXB2 153 aa6.34□□□□□ -1.39
SMG6-218ENST00000575454 PRSS54Q6PEW0 395 aa6.34□□□□□ -1.39
SMG6-218ENST00000575454 NOXA1Q86UR1 476 aa6.34□□□□□ -1.39
SMG6-218ENST00000575454 LYSMD2Q8IV50 215 aa6.34□□□□□ -1.39
SMG6-218ENST00000575454 ZNF709Q8N972 641 aa6.34□□□□□ -1.39
SMG6-218ENST00000575454 OR4B1Q8NGF8 309 aa6.34□□□□□ -1.39
SMG6-218ENST00000575454 OR52E5Q8NH55 327 aa6.34□□□□□ -1.39
SMG6-218ENST00000575454 COQ8AQ8NI60 647 aa6.34□□□□□ -1.39
SMG6-218ENST00000575454 CNBD2Q96M20 576 aa6.34□□□□□ -1.39
SMG6-218ENST00000575454 TMEM208Q9BTX3 173 aa6.34□□□□□ -1.39
SMG6-218ENST00000575454 MAGT1Q9H0U3 335 aa6.34□□□□□ -1.39
SMG6-218ENST00000575454 KLK11Q9UBX7 282 aa6.34□□□□□ -1.39
SMG6-218ENST00000575454 CACFD1Q9UGQ2 172 aa6.34□□□□□ -1.39
SMG6-218ENST00000575454 LOC100506127A0A0U1RQW1 187 aa6.33□□□□□ -1.4
SMG6-218ENST00000575454 B3GALNT1O75752 331 aa6.33□□□□□ -1.4
SMG6-218ENST00000575454 NUDT3O95989 172 aa6.33□□□□□ -1.4
SMG6-218ENST00000575454 TOMM40O96008 361 aa6.33□□□□□ -1.4
SMG6-218ENST00000575454 P0C879 139 aa6.33□□□□□ -1.4
SMG6-218ENST00000575454 RCVRNP35243 200 aa6.33□□□□□ -1.4
SMG6-218ENST00000575454 RND2P52198 227 aa6.33□□□□□ -1.4
SMG6-218ENST00000575454 FXYD7P58549 80 aa6.33□□□□□ -1.4
SMG6-218ENST00000575454 B2MP61769 119 aa6.33□□□□□ -1.4
SMG6-218ENST00000575454 CLINT1Q14677 625 aa6.33□□□□□ -1.4
SMG6-218ENST00000575454 ZNF79Q15937 498 aa6.33□□□□□ -1.4
SMG6-218ENST00000575454 IZUMO4Q1ZYL8 232 aa6.33□□□□□ -1.4
SMG6-218ENST00000575454 C1orf194Q5T5A4 169 aa6.33□□□□□ -1.4
SMG6-218ENST00000575454 OR8G2PQ6IF36 304 aa6.33□□□□□ -1.4
SMG6-218ENST00000575454 SPARTQ8N0X7 666 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms