RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 GUCA1BQ9UMX6 200 aa0.29□□□□□ -2.36
CDC27-216ENST00000574304 HS3ST2Q9Y278 367 aa0.29□□□□□ -2.36
CDC27-216ENST00000574304 UTP11Q9Y3A2 253 aaKnown RBP0.29□□□□□ -2.36
CDC27-216ENST00000574304 V9GYY5 206 aaPredicted RBP0.29□□□□□ -2.36
CDC27-216ENST00000574304 OR2T8A6NH00 312 aa0.28□□□□□ -2.36
CDC27-216ENST00000574304 CETN3O15182 167 aa0.28□□□□□ -2.36
CDC27-216ENST00000574304 FAM74A1Q5RGS3 127 aa0.28□□□□□ -2.36
CDC27-216ENST00000574304 TSPAN32Q96QS1 320 aa0.28□□□□□ -2.36
CDC27-216ENST00000574304 TLNRD1Q9H1K6 362 aa0.28□□□□□ -2.36
CDC27-216ENST00000574304 NHP2Q9NX24 153 aaKnown RBP0.28□□□□□ -2.36
CDC27-216ENST00000574304 MDN1Q9NU22 5596 aa0.28□□□□□ -2.36
CDC27-216ENST00000574304 SCN10AQ9Y5Y9 1956 aa0.28□□□□□ -2.36
CDC27-216ENST00000574304 MACF1Q9UPN3 7388 aaKnown RBP0.28□□□□□ -2.37
CDC27-216ENST00000574304 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.27□□□□□ -2.37
CDC27-216ENST00000574304 C1orf196B1AJZ1 125 aa0.27□□□□□ -2.37
CDC27-216ENST00000574304 PIRO00625 290 aa0.27□□□□□ -2.37
CDC27-216ENST00000574304 IFNA5P01569 189 aa0.27□□□□□ -2.37
CDC27-216ENST00000574304 OR4E1P0C645 316 aa0.27□□□□□ -2.37
CDC27-216ENST00000574304 SRSF6Q13247 344 aaKnown RBP0.27□□□□□ -2.37
CDC27-216ENST00000574304 COTL1Q14019 142 aa0.27□□□□□ -2.37
CDC27-216ENST00000574304 ESRGQ1W209 222 aa0.27□□□□□ -2.37
CDC27-216ENST00000574304 ACOT6Q3I5F7 207 aaPredicted RBP0.27□□□□□ -2.37
CDC27-216ENST00000574304 LINC01554Q52M75 96 aa0.27□□□□□ -2.37
CDC27-216ENST00000574304 CCDC122Q5T0U0 273 aa0.27□□□□□ -2.37
CDC27-216ENST00000574304 KRT222Q8N1A0 295 aa0.27□□□□□ -2.37
CDC27-216ENST00000574304 DCUN1D1Q96GG9 259 aa0.27□□□□□ -2.37
CDC27-216ENST00000574304 CCDC90BQ9GZT6 254 aa0.27□□□□□ -2.37
CDC27-216ENST00000574304 HEATR1Q9H583 2144 aaKnown RBP0.27□□□□□ -2.37
CDC27-216ENST00000574304 C10orf95Q9H7T3 257 aa0.27□□□□□ -2.37
CDC27-216ENST00000574304 UBAP1Q9NZ09 502 aa0.27□□□□□ -2.37
CDC27-216ENST00000574304 MRPL27Q9P0M9 148 aaKnown RBP0.27□□□□□ -2.37
CDC27-216ENST00000574304 TMEM14CQ9P0S9 112 aa0.27□□□□□ -2.37
CDC27-216ENST00000574304 HECW2Q9P2P5 1572 aa0.27□□□□□ -2.37
CDC27-216ENST00000574304 ALPK3Q96L96 1907 aa0.26□□□□□ -2.37
CDC27-216ENST00000574304 ZNF462Q96JM2 2506 aa0.26□□□□□ -2.37
CDC27-216ENST00000574304 SYNE2Q8WXH0 6885 aaKnown RBP0.26□□□□□ -2.37
CDC27-216ENST00000574304 MUC5ACP98088 5654 aa0.26□□□□□ -2.37
CDC27-216ENST00000574304 TRAV26-2A0A0B4J265 109 aa0.26□□□□□ -2.37
CDC27-216ENST00000574304 PRH1P02810 166 aa0.26□□□□□ -2.37
CDC27-216ENST00000574304 SMIM10L2AP0DMW4 78 aa0.26□□□□□ -2.37
CDC27-216ENST00000574304 SMIM10L2BP0DMW5 78 aa0.26□□□□□ -2.37
CDC27-216ENST00000574304 CASP1P29466 404 aa0.26□□□□□ -2.37
CDC27-216ENST00000574304 SULT1A1P50225 295 aa0.26□□□□□ -2.37
CDC27-216ENST00000574304 WFDC5Q8TCV5 224 aa0.26□□□□□ -2.37
CDC27-216ENST00000574304 DCSTAMPQ9H295 470 aa0.26□□□□□ -2.37
CDC27-216ENST00000574304 NUP155O75694 1391 aa0.26□□□□□ -2.37
CDC27-216ENST00000574304 COL1A1P02452 1464 aaPredicted RBP0.26□□□□□ -2.37
CDC27-216ENST00000574304 ANKRD17O75179 2603 aaKnown RBP0.26□□□□□ -2.37
CDC27-216ENST00000574304 FRAS1Q86XX4 4008 aa0.25□□□□□ -2.37
CDC27-216ENST00000574304 CHD3Q12873 2000 aaKnown RBP0.25□□□□□ -2.37
CDC27-216ENST00000574304 MYH10P35580 1976 aa0.25□□□□□ -2.37
CDC27-216ENST00000574304 KIAA1549Q9HCM3 1950 aa0.25□□□□□ -2.37
CDC27-216ENST00000574304 MYO3BQ8WXR4 1341 aa0.25□□□□□ -2.37
CDC27-216ENST00000574304 A0A087X0T9 212 aa0.25□□□□□ -2.37
CDC27-216ENST00000574304 FAM236DA0A1B0GTK5 79 aa0.25□□□□□ -2.37
CDC27-216ENST00000574304 CCL16O15467 120 aa0.25□□□□□ -2.37
CDC27-216ENST00000574304 CHP2O43745 196 aa0.25□□□□□ -2.37
CDC27-216ENST00000574304 AHSA1O95433 338 aa0.25□□□□□ -2.37
CDC27-216ENST00000574304 FAM236CP0DP71 79 aa0.25□□□□□ -2.37
CDC27-216ENST00000574304 NKX2-5P52952 324 aaPredicted RBP0.25□□□□□ -2.37
CDC27-216ENST00000574304 YPEL3P61236 119 aaPredicted RBP0.25□□□□□ -2.37
CDC27-216ENST00000574304 RHOBP62745 196 aa0.25□□□□□ -2.37
CDC27-216ENST00000574304 OR8D4Q8NGM9 314 aa0.25□□□□□ -2.37
CDC27-216ENST00000574304 TEX47Q8TBZ9 253 aa0.25□□□□□ -2.37
CDC27-216ENST00000574304 C8orf76Q96K31 380 aa0.25□□□□□ -2.37
CDC27-216ENST00000574304 TAS2R7Q9NYW3 318 aa0.25□□□□□ -2.37
CDC27-216ENST00000574304 CYSLTR1Q9Y271 337 aa0.25□□□□□ -2.37
CDC27-216ENST00000574304 C7orf71A4D174 169 aa0.24□□□□□ -2.37
CDC27-216ENST00000574304 TLCD2A6NGC4 264 aa0.24□□□□□ -2.37
CDC27-216ENST00000574304 RBP1P09455 135 aa0.24□□□□□ -2.37
CDC27-216ENST00000574304 DEFA3P59666 94 aa0.24□□□□□ -2.37
CDC27-216ENST00000574304 LINC00322Q6ZN03 302 aaPredicted RBP0.24□□□□□ -2.37
CDC27-216ENST00000574304 HIST1H2BLQ99880 126 aa0.24□□□□□ -2.37
CDC27-216ENST00000574304 SMR3AQ99954 134 aa0.24□□□□□ -2.37
CDC27-216ENST00000574304 C20orf27Q9GZN8 174 aa0.24□□□□□ -2.37
CDC27-216ENST00000574304 BCL2L10Q9HD36 194 aa0.24□□□□□ -2.37
CDC27-216ENST00000574304 VPS29Q9UBQ0 182 aa0.24□□□□□ -2.37
CDC27-216ENST00000574304 CITO14578 2027 aa0.24□□□□□ -2.37
CDC27-216ENST00000574304 SBF1O95248 1867 aa0.24□□□□□ -2.37
CDC27-216ENST00000574304 ASCC3Q8N3C0 2202 aaKnown RBP0.23□□□□□ -2.37
CDC27-216ENST00000574304 TRBV6-4A0A1B0GX49 114 aa0.23□□□□□ -2.37
CDC27-216ENST00000574304 GADD45GO95257 159 aa0.23□□□□□ -2.37
CDC27-216ENST00000574304 IFNA16P05015 189 aa0.23□□□□□ -2.37
CDC27-216ENST00000574304 SMIM17P0DL12 118 aa0.23□□□□□ -2.37
CDC27-216ENST00000574304 MAGOHP61326 146 aaKnown RBP0.23□□□□□ -2.37
CDC27-216ENST00000574304 TSNQ15631 228 aaKnown RBP0.23□□□□□ -2.37
CDC27-216ENST00000574304 LCA10Q71F78 164 aa0.23□□□□□ -2.37
CDC27-216ENST00000574304 ST6GALNAC3Q8NDV1 305 aa0.23□□□□□ -2.37
CDC27-216ENST00000574304 OR2T35Q8NGX2 323 aa0.23□□□□□ -2.37
CDC27-216ENST00000574304 NIT2Q9NQR4 276 aa0.23□□□□□ -2.37
CDC27-216ENST00000574304 SCN8AQ9UQD0 1980 aa0.23□□□□□ -2.37
CDC27-216ENST00000574304 SNAPC4Q5SXM2 1469 aa0.22□□□□□ -2.37
CDC27-216ENST00000574304 FSIP2Q5CZC0 6907 aa0.22□□□□□ -2.37
CDC27-216ENST00000574304 ROBO3Q96MS0 1386 aa0.22□□□□□ -2.37
CDC27-216ENST00000574304 CNIH1O95406 144 aa0.22□□□□□ -2.37
CDC27-216ENST00000574304 TTRP02766 147 aa0.22□□□□□ -2.37
CDC27-216ENST00000574304 ANP32AP39687 249 aaKnown RBP0.22□□□□□ -2.37
CDC27-216ENST00000574304 OR2T10Q8NGZ9 312 aa0.22□□□□□ -2.37
CDC27-216ENST00000574304 TMEM254Q8TBM7 123 aa0.22□□□□□ -2.37
CDC27-216ENST00000574304 SLAMF6Q96DU3 332 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms