RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 C4orf3Q8WVX3 66 aa10.45□□□□□ -0.74
LINC01996-201ENST00000573270 ST8SIA2Q92186 375 aa10.45□□□□□ -0.74
LINC01996-201ENST00000573270 ACY3Q96HD9 319 aa10.45□□□□□ -0.74
LINC01996-201ENST00000573270 USMG5Q96IX5 58 aa10.45□□□□□ -0.74
LINC01996-201ENST00000573270 CXorf58Q96LI9 332 aa10.45□□□□□ -0.74
LINC01996-201ENST00000573270 UBE2E2Q96LR5 201 aa10.45□□□□□ -0.74
LINC01996-201ENST00000573270 SMCO3A2RU48 225 aa10.44□□□□□ -0.74
LINC01996-201ENST00000573270 RNF222A6NCQ9 220 aa10.44□□□□□ -0.74
LINC01996-201ENST00000573270 PPP5D1E7EU14 171 aa10.44□□□□□ -0.74
LINC01996-201ENST00000573270 F8W735 103 aaPredicted RBP10.44□□□□□ -0.74
LINC01996-201ENST00000573270 RND2P52198 227 aa10.44□□□□□ -0.74
LINC01996-201ENST00000573270 CLEC19AQ6UXS0 136 aa10.44□□□□□ -0.74
LINC01996-201ENST00000573270 NDUFA11Q86Y39 141 aa10.44□□□□□ -0.74
LINC01996-201ENST00000573270 OR10P1Q8NGE3 313 aa10.44□□□□□ -0.74
LINC01996-201ENST00000573270 OR1S2Q8NGQ3 325 aa10.44□□□□□ -0.74
LINC01996-201ENST00000573270 SCGB1C1Q8TD33 95 aa10.44□□□□□ -0.74
LINC01996-201ENST00000573270 GNPNAT1Q96EK6 184 aaPredicted RBP10.44□□□□□ -0.74
LINC01996-201ENST00000573270 SLC35E1Q96K37 410 aa10.44□□□□□ -0.74
LINC01996-201ENST00000573270 DUX3Q96PT4 197 aa10.44□□□□□ -0.74
LINC01996-201ENST00000573270 ZNF747Q9BV97 191 aa10.44□□□□□ -0.74
LINC01996-201ENST00000573270 PFDN2Q9UHV9 154 aa10.44□□□□□ -0.74
LINC01996-201ENST00000573270 UBE2L5PA0A1B0GUS4 154 aa10.43□□□□□ -0.74
LINC01996-201ENST00000573270 OR2T8A6NH00 312 aa10.43□□□□□ -0.74
LINC01996-201ENST00000573270 I3L521 148 aa10.43□□□□□ -0.74
LINC01996-201ENST00000573270 CDX1P47902 265 aaPredicted RBP10.43□□□□□ -0.74
LINC01996-201ENST00000573270 BLOC1S1P78537 153 aa10.43□□□□□ -0.74
LINC01996-201ENST00000573270 DLK1P80370 383 aa10.43□□□□□ -0.74
LINC01996-201ENST00000573270 NHLH2Q02577 135 aa10.43□□□□□ -0.74
LINC01996-201ENST00000573270 AKR1C1Q04828 323 aa10.43□□□□□ -0.74
LINC01996-201ENST00000573270 CLINT1Q14677 625 aa10.43□□□□□ -0.74
LINC01996-201ENST00000573270 ZNF343Q6P1L6 599 aa10.43□□□□□ -0.74
LINC01996-201ENST00000573270 C3orf56Q8N813 242 aa10.43□□□□□ -0.74
LINC01996-201ENST00000573270 SMIM3Q9BZL3 60 aa10.43□□□□□ -0.74
LINC01996-201ENST00000573270 MED9Q9NWA0 146 aa10.43□□□□□ -0.74
LINC01996-201ENST00000573270 IGHV4OR15-8A0A075B7B6 117 aa10.42□□□□□ -0.74
LINC01996-201ENST00000573270 A0A087WW49 117 aa10.42□□□□□ -0.74
LINC01996-201ENST00000573270 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.42□□□□□ -0.74
LINC01996-201ENST00000573270 TRBV7-1A0A0A6YYK4 115 aa10.42□□□□□ -0.74
LINC01996-201ENST00000573270 UMAD1C9J7I0 102 aa10.42□□□□□ -0.74
LINC01996-201ENST00000573270 TEX46H3BTG2 121 aa10.42□□□□□ -0.74
LINC01996-201ENST00000573270 BMPR1BO00238 502 aa10.42□□□□□ -0.74
LINC01996-201ENST00000573270 ARL3P36405 182 aa10.42□□□□□ -0.74
LINC01996-201ENST00000573270 MFAP4P55083 255 aa10.42□□□□□ -0.74
LINC01996-201ENST00000573270 RAB2AP61019 212 aa10.42□□□□□ -0.74
LINC01996-201ENST00000573270 GAMTQ14353 236 aa10.42□□□□□ -0.74
LINC01996-201ENST00000573270 ETFRF1Q6IPR1 90 aa10.42□□□□□ -0.74
LINC01996-201ENST00000573270 OR5C1Q8NGR4 320 aa10.42□□□□□ -0.74
LINC01996-201ENST00000573270 NPIPB3Q92617 1050 aa10.42□□□□□ -0.74
LINC01996-201ENST00000573270 SAT2Q96F10 170 aaPredicted RBP10.42□□□□□ -0.74
LINC01996-201ENST00000573270 FBXL17Q9UF56 701 aa10.42□□□□□ -0.74
LINC01996-201ENST00000573270 LINC00862A6NCI5 91 aa10.41□□□□□ -0.74
LINC01996-201ENST00000573270 GNG7O60262 68 aa10.41□□□□□ -0.74
LINC01996-201ENST00000573270 SEC11BP0C7V7 166 aa10.41□□□□□ -0.74
LINC01996-201ENST00000573270 GPX4P36969 197 aaPredicted RBP10.41□□□□□ -0.74
LINC01996-201ENST00000573270 RUNX1Q01196 453 aa10.41□□□□□ -0.74
LINC01996-201ENST00000573270 OR4X1Q8NH49 305 aa10.41□□□□□ -0.74
LINC01996-201ENST00000573270 RAX2Q96IS3 184 aa10.41□□□□□ -0.74
LINC01996-201ENST00000573270 CHRDL1Q9BU40 450 aa10.41□□□□□ -0.74
LINC01996-201ENST00000573270 TMEM147Q9BVK8 224 aa10.41□□□□□ -0.74
LINC01996-201ENST00000573270 GGACTQ9BVM4 153 aa10.41□□□□□ -0.74
LINC01996-201ENST00000573270 PEF1Q9UBV8 284 aaKnown RBP10.41□□□□□ -0.74
LINC01996-201ENST00000573270 TGOLN2O43493 480 aa10.4□□□□□ -0.74
LINC01996-201ENST00000573270 CLN5O75503 358 aa10.4□□□□□ -0.74
LINC01996-201ENST00000573270 TSPAN15O95858 294 aa10.4□□□□□ -0.74
LINC01996-201ENST00000573270 IGLC1P0CG04 106 aa10.4□□□□□ -0.74
LINC01996-201ENST00000573270 OR10J1P30954 320 aa10.4□□□□□ -0.74
LINC01996-201ENST00000573270 FCGR2BP31994 310 aaPredicted RBP10.4□□□□□ -0.74
LINC01996-201ENST00000573270 NPBWR1P48145 328 aa10.4□□□□□ -0.74
LINC01996-201ENST00000573270 TIGITQ495A1 244 aa10.4□□□□□ -0.74
LINC01996-201ENST00000573270 SHISA2Q6UWI4 295 aa10.4□□□□□ -0.74
LINC01996-201ENST00000573270 TMEM116Q8NCL8 245 aa10.4□□□□□ -0.74
LINC01996-201ENST00000573270 CACNG8Q8WXS5 425 aa10.4□□□□□ -0.74
LINC01996-201ENST00000573270 ATP5SQ99766 215 aa10.4□□□□□ -0.74
LINC01996-201ENST00000573270 UQCC1Q9NVA1 299 aa10.4□□□□□ -0.74
LINC01996-201ENST00000573270 IGKV1D-37A0A075B6S9 117 aa10.39□□□□□ -0.75
LINC01996-201ENST00000573270 IGKV1OR2-108A0A075B7D4 117 aa10.39□□□□□ -0.75
LINC01996-201ENST00000573270 IGHV3-35A0A0C4DH35 117 aa10.39□□□□□ -0.75
LINC01996-201ENST00000573270 CLEC3BP05452 202 aa10.39□□□□□ -0.75
LINC01996-201ENST00000573270 ADMP35318 185 aa10.39□□□□□ -0.75
LINC01996-201ENST00000573270 SLURP1P55000 103 aa10.39□□□□□ -0.75
LINC01996-201ENST00000573270 ZNF616Q08AN1 781 aa10.39□□□□□ -0.75
LINC01996-201ENST00000573270 VWC2Q2TAL6 325 aa10.39□□□□□ -0.75
LINC01996-201ENST00000573270 DPPA3Q6W0C5 159 aa10.39□□□□□ -0.75
LINC01996-201ENST00000573270 THAP8Q8NA92 274 aa10.39□□□□□ -0.75
LINC01996-201ENST00000573270 OR11H1Q8NG94 326 aa10.39□□□□□ -0.75
LINC01996-201ENST00000573270 ZNF414Q96IQ9 312 aa10.39□□□□□ -0.75
LINC01996-201ENST00000573270 FAM210AQ96ND0 272 aa10.39□□□□□ -0.75
LINC01996-201ENST00000573270 TXN2Q99757 166 aa10.39□□□□□ -0.75
LINC01996-201ENST00000573270 PARD6GQ9BYG4 376 aaPredicted RBP10.39□□□□□ -0.75
LINC01996-201ENST00000573270 WFDC1Q9HC57 220 aa10.39□□□□□ -0.75
LINC01996-201ENST00000573270 DNHD1Q96M86 4753 aa10.39□□□□□ -0.75
LINC01996-201ENST00000573270 ZFP92A6NM28 416 aa10.38□□□□□ -0.75
LINC01996-201ENST00000573270 FNDC10F2Z333 226 aa10.38□□□□□ -0.75
LINC01996-201ENST00000573270 LINC01619G3V211 115 aa10.38□□□□□ -0.75
LINC01996-201ENST00000573270 NUPL2O15504 423 aaKnown RBP10.38□□□□□ -0.75
LINC01996-201ENST00000573270 IGKV1-17P01599 117 aa10.38□□□□□ -0.75
LINC01996-201ENST00000573270 HOXD3P31249 432 aaPredicted RBP10.38□□□□□ -0.75
LINC01996-201ENST00000573270 RAB31Q13636 194 aa10.38□□□□□ -0.75
LINC01996-201ENST00000573270 FHL3Q13643 280 aa10.38□□□□□ -0.75
LINC01996-201ENST00000573270 ALKAL2Q6UX46 152 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms