RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 TRAV14DV4A0A0A6YYC5 116 aa10.01□□□□□ -0.81
RPAIN-207ENST00000570883 RBMY1BA6NDE4 496 aaKnown RBP10.01□□□□□ -0.81
RPAIN-207ENST00000570883 RBMY1EA6NEQ0 496 aaKnown RBP10.01□□□□□ -0.81
RPAIN-207ENST00000570883 RBMY1DP0C7P1 496 aaKnown RBP10.01□□□□□ -0.81
RPAIN-207ENST00000570883 C4orf46Q504U0 113 aa10.01□□□□□ -0.81
RPAIN-207ENST00000570883 LILRB2Q8N423 598 aa10.01□□□□□ -0.81
RPAIN-207ENST00000570883 S100ZQ8WXG8 99 aa10.01□□□□□ -0.81
RPAIN-207ENST00000570883 ST8SIA2Q92186 375 aa10.01□□□□□ -0.81
RPAIN-207ENST00000570883 GINS3Q9BRX5 216 aa10.01□□□□□ -0.81
RPAIN-207ENST00000570883 SRD5A3Q9H8P0 318 aa10.01□□□□□ -0.81
RPAIN-207ENST00000570883 TRAV6A0A075B6T7 132 aa10□□□□□ -0.81
RPAIN-207ENST00000570883 TCRBP04435 133 aa10□□□□□ -0.81
RPAIN-207ENST00000570883 OR10J1P30954 320 aa10□□□□□ -0.81
RPAIN-207ENST00000570883 ODF3L2Q3SX64 289 aa10□□□□□ -0.81
RPAIN-207ENST00000570883 FAM90A2PQ658T7 463 aa10□□□□□ -0.81
RPAIN-207ENST00000570883 ETFRF1Q6IPR1 90 aa10□□□□□ -0.81
RPAIN-207ENST00000570883 NOXA1Q86UR1 476 aa10□□□□□ -0.81
RPAIN-207ENST00000570883 OR1S2Q8NGQ3 325 aa10□□□□□ -0.81
RPAIN-207ENST00000570883 COQ8AQ8NI60 647 aa10□□□□□ -0.81
RPAIN-207ENST00000570883 NPIPB3Q92617 1050 aa10□□□□□ -0.81
RPAIN-207ENST00000570883 ACY3Q96HD9 319 aa10□□□□□ -0.81
RPAIN-207ENST00000570883 WWC2-AS2Q96NR7 200 aa10□□□□□ -0.81
RPAIN-207ENST00000570883 CITED4Q96RK1 184 aa10□□□□□ -0.81
RPAIN-207ENST00000570883 VSIRQ9H7M9 311 aa10□□□□□ -0.81
RPAIN-207ENST00000570883 NUDT15Q9NV35 164 aa10□□□□□ -0.81
RPAIN-207ENST00000570883 AGRNO00468 2067 aa10□□□□□ -0.81
RPAIN-207ENST00000570883 KMT2CQ8NEZ4 4911 aaKnown RBP9.99□□□□□ -0.81
RPAIN-207ENST00000570883 TRAV30A0A087WSZ9 112 aa9.99□□□□□ -0.81
RPAIN-207ENST00000570883 IGHV3-66A0A0C4DH42 116 aa9.99□□□□□ -0.81
RPAIN-207ENST00000570883 SYNGR2O43760 224 aa9.99□□□□□ -0.81
RPAIN-207ENST00000570883 IFNA4P05014 189 aa9.99□□□□□ -0.81
RPAIN-207ENST00000570883 ATP5IP56385 69 aaPredicted RBP9.99□□□□□ -0.81
RPAIN-207ENST00000570883 LAMTOR1Q6IAA8 161 aa9.99□□□□□ -0.81
RPAIN-207ENST00000570883 OR4D5Q8NGN0 318 aa9.99□□□□□ -0.81
RPAIN-207ENST00000570883 MITD1Q8WV92 249 aa9.99□□□□□ -0.81
RPAIN-207ENST00000570883 PRSS46E5RG02 174 aa9.98□□□□□ -0.81
RPAIN-207ENST00000570883 WRBO00258 174 aa9.98□□□□□ -0.81
RPAIN-207ENST00000570883 SCGB2A1O75556 95 aa9.98□□□□□ -0.81
RPAIN-207ENST00000570883 MED6O75586 246 aa9.98□□□□□ -0.81
RPAIN-207ENST00000570883 YPEL3P61236 119 aaPredicted RBP9.98□□□□□ -0.81
RPAIN-207ENST00000570883 POLR2GP62487 172 aaKnown RBP eCLIP9.98□□□□□ -0.81
RPAIN-207ENST00000570883 IFITM3Q01628 133 aa9.98□□□□□ -0.81
RPAIN-207ENST00000570883 ID3Q02535 119 aa9.98□□□□□ -0.81
RPAIN-207ENST00000570883 ASAH1Q13510 395 aa9.98□□□□□ -0.81
RPAIN-207ENST00000570883 GAMTQ14353 236 aa9.98□□□□□ -0.81
RPAIN-207ENST00000570883 TCF24Q7RTU0 167 aa9.98□□□□□ -0.81
RPAIN-207ENST00000570883 SEC22CQ9BRL7 303 aa9.98□□□□□ -0.81
RPAIN-207ENST00000570883 ZMAT4Q9H898 229 aa9.98□□□□□ -0.81
RPAIN-207ENST00000570883 RETNQ9HD89 108 aa9.98□□□□□ -0.81
RPAIN-207ENST00000570883 UBQLN2Q9UHD9 624 aa9.98□□□□□ -0.81
RPAIN-207ENST00000570883 IGKV3-7A0A075B6H7 116 aa9.97□□□□□ -0.81
RPAIN-207ENST00000570883 IGKV1D-37A0A075B6S9 117 aa9.97□□□□□ -0.81
RPAIN-207ENST00000570883 OR4C46A6NHA9 309 aa9.97□□□□□ -0.81
RPAIN-207ENST00000570883 H3BP45 60 aa9.97□□□□□ -0.81
RPAIN-207ENST00000570883 UPK1BO75841 260 aa9.97□□□□□ -0.81
RPAIN-207ENST00000570883 DFFBO76075 338 aa9.97□□□□□ -0.81
RPAIN-207ENST00000570883 IFNA21P01568 189 aa9.97□□□□□ -0.81
RPAIN-207ENST00000570883 CRYBB3P26998 211 aa9.97□□□□□ -0.81
RPAIN-207ENST00000570883 GPX4P36969 197 aaPredicted RBP9.97□□□□□ -0.81
RPAIN-207ENST00000570883 ZNF846Q147U1 533 aa9.97□□□□□ -0.81
RPAIN-207ENST00000570883 USF2Q15853 346 aaPredicted RBP9.97□□□□□ -0.81
RPAIN-207ENST00000570883 GBGT1Q8N5D6 347 aa9.97□□□□□ -0.81
RPAIN-207ENST00000570883 CIB3Q96Q77 187 aaPredicted RBP9.97□□□□□ -0.81
RPAIN-207ENST00000570883 METTL26Q96S19 204 aa9.97□□□□□ -0.81
RPAIN-207ENST00000570883 WDR12Q9GZL7 423 aaKnown RBP9.97□□□□□ -0.81
RPAIN-207ENST00000570883 CCSO14618 274 aa9.96□□□□□ -0.82
RPAIN-207ENST00000570883 TOMM40O96008 361 aa9.96□□□□□ -0.82
RPAIN-207ENST00000570883 IL4P05112 153 aa9.96□□□□□ -0.82
RPAIN-207ENST00000570883 NPPCP23582 126 aa9.96□□□□□ -0.82
RPAIN-207ENST00000570883 NKX2-1P43699 371 aaPredicted RBP9.96□□□□□ -0.82
RPAIN-207ENST00000570883 TFPI2P48307 235 aa9.96□□□□□ -0.82
RPAIN-207ENST00000570883 IAH1Q2TAA2 248 aaPredicted RBP9.96□□□□□ -0.82
RPAIN-207ENST00000570883 SPATA25Q9BR10 227 aa9.96□□□□□ -0.82
RPAIN-207ENST00000570883 PAIP2BQ9ULR5 123 aaKnown RBP9.96□□□□□ -0.82
RPAIN-207ENST00000570883 U3KQE9 123 aa9.96□□□□□ -0.82
RPAIN-207ENST00000570883 IGKV1OR2-108A0A075B7D4 117 aa9.95□□□□□ -0.82
RPAIN-207ENST00000570883 FAM240BA0A1B0GVZ2 78 aa9.95□□□□□ -0.82
RPAIN-207ENST00000570883 SSSCA1O60232 199 aa9.95□□□□□ -0.82
RPAIN-207ENST00000570883 H2AFB2P0C5Z0 115 aa9.95□□□□□ -0.82
RPAIN-207ENST00000570883 RD3LP0DJH9 198 aa9.95□□□□□ -0.82
RPAIN-207ENST00000570883 PSG1P11464 419 aa9.95□□□□□ -0.82
RPAIN-207ENST00000570883 BMI1P35226 326 aa9.95□□□□□ -0.82
RPAIN-207ENST00000570883 P2RY1P47900 373 aa9.95□□□□□ -0.82
RPAIN-207ENST00000570883 RAB11AP62491 216 aa9.95□□□□□ -0.82
RPAIN-207ENST00000570883 SPANXN5Q5MJ07 72 aa9.95□□□□□ -0.82
RPAIN-207ENST00000570883 ZBTB8BQ8NAP8 495 aaPredicted RBP9.95□□□□□ -0.82
RPAIN-207ENST00000570883 ZNF431Q8TF32 576 aaPredicted RBP9.95□□□□□ -0.82
RPAIN-207ENST00000570883 Q8WTZ3 238 aa9.95□□□□□ -0.82
RPAIN-207ENST00000570883 SLC35E1Q96K37 410 aa9.95□□□□□ -0.82
RPAIN-207ENST00000570883 FAM110AQ9BQ89 295 aa9.95□□□□□ -0.82
RPAIN-207ENST00000570883 MS4A6AQ9H2W1 248 aa9.95□□□□□ -0.82
RPAIN-207ENST00000570883 RCL1Q9Y2P8 373 aaKnown RBP9.95□□□□□ -0.82
RPAIN-207ENST00000570883 HNRNPCP07910 306 aaKnown RBP eCLIP9.94□□□□□ -0.82
RPAIN-207ENST00000570883 PAX9P55771 341 aa9.94□□□□□ -0.82
RPAIN-207ENST00000570883 ZNF90Q03938 601 aa9.94□□□□□ -0.82
RPAIN-207ENST00000570883 ZNF124Q15973 351 aa9.94□□□□□ -0.82
RPAIN-207ENST00000570883 MZT2BQ6NZ67 158 aa9.94□□□□□ -0.82
RPAIN-207ENST00000570883 FAM24BQ8N5W8 94 aa9.94□□□□□ -0.82
RPAIN-207ENST00000570883 GGTLC1Q9BX51 225 aa9.94□□□□□ -0.82
RPAIN-207ENST00000570883 TMEM231Q9H6L2 316 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms