RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 TNFSF12O43508 249 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 SPRY3O43610 288 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 LYZL6O75951 148 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 NGFP01138 241 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 IGHG2P01859 326 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 CSN2P05814 226 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 OR4A8P0C604 315 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 CT45A10P0DMU9 189 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 RCC1P18754 421 aaPredicted RBP2.85□□□□□ -1.95
SMG6-208ENST00000570874 NTF3P20783 257 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 CCL1P22362 96 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 IGHV1-2P23083 117 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 MPGP29372 298 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 PFN2P35080 140 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 GPR6P46095 362 aaPredicted RBP2.85□□□□□ -1.95
SMG6-208ENST00000570874 H2BFSP57053 126 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 S100A10P60903 97 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 GRB2P62993 217 aaKnown RBP2.85□□□□□ -1.95
SMG6-208ENST00000570874 HBG1P69891 147 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 HBG2P69892 147 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 HSD52Q0P140 79 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 PRDX4Q13162 271 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 LINC00303Q3SY05 128 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 FAM201AQ5SY85 155 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 C10orf91Q5T1B1 145 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 TMEM244Q5VVB8 128 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 C11orf87Q6NUJ2 197 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 RASL11AQ6T310 242 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 Q6ZS92 163 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 Q6ZVH6 145 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 Q6ZVQ6 151 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 C1QL2Q7Z5L3 287 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 ZNF584Q8IVC4 421 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 OR51G1Q8NGK1 321 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 OR8S1Q8NH09 359 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 SSC4DQ8WTU2 575 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 BLNKQ8WV28 456 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 FAM3DQ96BQ1 224 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 GPR146Q96CH1 333 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 STARD4Q96DR4 205 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 GALNT14Q96FL9 552 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 WBP1Q96G27 269 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 ZNF799Q96GE5 643 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 C1orf147Q96MC9 270 aaPredicted RBP2.85□□□□□ -1.95
SMG6-208ENST00000570874 LINC00052Q96N35 136 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 PRADC1Q9BSG0 188 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 TM2D1Q9BX74 207 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 C1QTNF6Q9BXI9 259 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 SEC11CQ9BY50 192 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 TMEM222Q9H0R3 208 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 WDR13Q9H1Z4 485 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 PRO1933Q9H354 126 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 SMDT1Q9H4I9 107 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 BANF2Q9H503 90 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 MOB1AQ9H8S9 216 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 ZNF71Q9NQZ8 489 aaPredicted RBP2.85□□□□□ -1.95
SMG6-208ENST00000570874 ZNF581Q9P0T4 197 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 SHPKQ9UHJ6 478 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 COX11Q9Y6N1 276 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 SPENQ96T58 3664 aaKnown RBP2.85□□□□□ -1.95
SMG6-208ENST00000570874 COL6A6A6NMZ7 2263 aa2.85□□□□□ -1.95
SMG6-208ENST00000570874 FXYD6-FXYD2A0A087WZ82 144 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 TRBV6-7A0A0A0MS04 114 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 TRAV8-2A0A0B4J237 113 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 GAGE12HA6NDE8 117 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 F6UB75 175 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 G3V3Q6 166 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 RPL36A-HNRNPH2H7BZ11 118 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 BCL2L11O43521 198 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 ZNF207O43670 478 aaKnown RBP2.84□□□□□ -1.95
SMG6-208ENST00000570874 ANGPTL7O43827 346 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 SS18L1O75177 396 aaPredicted RBP2.84□□□□□ -1.95
SMG6-208ENST00000570874 NDUFS7O75251 213 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 C1QL1O75973 258 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 CYB5AP00167 134 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 CFDP00746 253 aaPredicted RBP2.84□□□□□ -1.95
SMG6-208ENST00000570874 APOC3P02656 99 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 GPX1P07203 203 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 SOD3P08294 240 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 PGA5P0DJD9 388 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 TPT1P13693 172 aaKnown RBP2.84□□□□□ -1.95
SMG6-208ENST00000570874 HIST1H1DP16402 221 aaKnown RBP2.84□□□□□ -1.95
SMG6-208ENST00000570874 ZNF20P17024 532 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 CXCL2P19875 107 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 CTRLP40313 264 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 GUCA1AP43080 201 aaPredicted RBP2.84□□□□□ -1.95
SMG6-208ENST00000570874 GPM6AP51674 278 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 QRFPP83859 136 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 HOXA4Q00056 320 aaPredicted RBP2.84□□□□□ -1.95
SMG6-208ENST00000570874 ZNF92Q03936 586 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 IL15RAQ13261 267 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 TMEM187Q14656 261 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 HERPUD1Q15011 391 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 JOSD1Q15040 202 aaPredicted RBP2.84□□□□□ -1.95
SMG6-208ENST00000570874 C1orf100Q5SVJ3 147 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 IBA57Q5T440 356 aaKnown RBP2.84□□□□□ -1.95
SMG6-208ENST00000570874 SPATA31B1PQ5VZV4 182 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 ZNF660Q6AZW8 331 aaPredicted RBP2.84□□□□□ -1.95
SMG6-208ENST00000570874 GLIPR1L1Q6UWM5 242 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 IGFL3Q6UXB1 125 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms