RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, human

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-218	ENST00000569440	CRX	O43186	299 aa	Predicted RBP	4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	RBFOX2	O43251	390 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	NXPH3	O95157	252 aa		4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	FCGR3A	P08637	254 aa		4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	IGKV1-13	P0DP09	117 aa		4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	NPBWR1	P48145	328 aa		4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	RORC	P51449	518 aa		4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	PAX9	P55771	341 aa		4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	FAM78B	Q5VT40	261 aa		4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	TTC23	Q5W5X9	447 aa		4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	AMTN	Q6UX39	209 aa		4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	AQP12A	Q8IXF9	295 aa		4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	NARS2	Q96I59	477 aa	Known RBP	4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	PGLYRP3	Q96LB9	341 aa		4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	DERL3	Q96Q80	235 aa		4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	CIB1	Q99828	191 aa		4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	LINC00467	Q9BRT7	94 aa		4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	CENPO	Q9BU64	300 aa		4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	PAXX	Q9BUH6	204 aa		4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	GABARAPL3	Q9BY60	117 aa		4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	OR2W1	Q9Y3N9	320 aa		4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	IGKV1D-8	A0A087WSZ0	117 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	MFNG	O00587	321 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	PSCA	O43653	123 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	FKBP6	O75344	327 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	HPRT1	P00492	218 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	LALBA	P00709	142 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	NQO2	P16083	231 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	ELK1	P19419	428 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	C4orf46	Q504U0	113 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440		Q6ZS49	121 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	CMTM1	Q8IZ96	169 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	SPAG16	Q8N0X2	631 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	LRTM2	Q8N967	370 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	OR52I1	Q8NGK6	324 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	MAFIP	Q8WZ33	124 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	LINC01600	Q96MT4	127 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	URM1	Q9BTM9	101 aa	Known RBP	4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	HINT2	Q9BX68	163 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	KRTAP4-9	Q9BYQ8	210 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	GABARAPL1	Q9H0R8	117 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	SLC25A32	Q9H2D1	315 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	NOP10	Q9NPE3	64 aa	Known RBP	4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	MRPS18A	Q9NVS2	196 aa	Known RBP	4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	BABAM2	Q9NXR7	383 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	TAS2R8	Q9NYW2	309 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440	CLEC2D	Q9UHP7	191 aa		4.07	□□□□□ -1.76
BBS4-218	ENST00000569440		A0A0J9YX75	114 aa		4.06	□□□□□ -1.76
BBS4-218	ENST00000569440	SNTN	A6NMZ2	147 aa		4.06	□□□□□ -1.76
BBS4-218	ENST00000569440		F6UB75	175 aa		4.06	□□□□□ -1.76
BBS4-218	ENST00000569440		G3V2T6	193 aa		4.06	□□□□□ -1.76
BBS4-218	ENST00000569440	ADAP1	O75689	374 aa		4.06	□□□□□ -1.76
BBS4-218	ENST00000569440	EVI2A	P22794	236 aa		4.06	□□□□□ -1.76
BBS4-218	ENST00000569440	NFYA	P23511	347 aa	Predicted RBP	4.06	□□□□□ -1.76
BBS4-218	ENST00000569440	KRTAP10-8	P60410	259 aa		4.06	□□□□□ -1.76
BBS4-218	ENST00000569440	WFDC2	Q14508	124 aa		4.06	□□□□□ -1.76
BBS4-218	ENST00000569440	LINC01620	Q4KN68	170 aa		4.06	□□□□□ -1.76
BBS4-218	ENST00000569440	LYPD5	Q6UWN5	251 aa		4.06	□□□□□ -1.76
BBS4-218	ENST00000569440	CCDC28A	Q8IWP9	274 aa		4.06	□□□□□ -1.76
BBS4-218	ENST00000569440	PINX1	Q96BK5	328 aa	Known RBP	4.06	□□□□□ -1.76
BBS4-218	ENST00000569440	C16orf74	Q96GX8	76 aa		4.06	□□□□□ -1.76
BBS4-218	ENST00000569440	TMEM56	Q96MV1	263 aa		4.06	□□□□□ -1.76
BBS4-218	ENST00000569440	LINC00052	Q96N35	136 aa		4.06	□□□□□ -1.76
BBS4-218	ENST00000569440	KRTAP3-1	Q9BYR8	98 aa		4.06	□□□□□ -1.76
BBS4-218	ENST00000569440	OR51B2	Q9Y5P1	312 aa		4.06	□□□□□ -1.76
BBS4-218	ENST00000569440	SOCS3	O14543	225 aa		4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	BUB3	O43684	328 aa		4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	INS	P01308	110 aa		4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	IGKV1-17	P01599	117 aa		4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	CRYGD	P07320	174 aa		4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	GABRB1	P18505	474 aa		4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	ETV6	P41212	452 aa		4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	PSMB3	P49720	205 aa		4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	ETV1	P50549	477 aa		4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	TAS2R60	P59551	318 aa		4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	SUMO2	P61956	95 aa	Known RBP	4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	MSMO1	Q15800	293 aa		4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	EBLN2	Q6P2I7	272 aa		4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	SIGLEC15	Q6ZMC9	328 aa		4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	ZNF493	Q6ZR52	646 aa		4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	TPRA1	Q86W33	373 aa		4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	C10orf126	Q8N4M7	172 aa		4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	DMBX1	Q8NFW5	382 aa		4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	RNASE8	Q8TDE3	154 aa	Known RBP	4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	RBPMS	Q93062	196 aa	Known RBP	4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	TMEM230	Q96A57	120 aa		4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	KRTAP9-3	Q9BYQ3	159 aa		4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	PLEKHA2	Q9HB19	425 aa		4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	AMBN	Q9NP70	447 aa		4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	CACNG5	Q9UF02	275 aa		4.05	□□□□□ -1.76
BBS4-218	ENST00000569440	TRAV5	A0A0B4J249	113 aa		4.04	□□□□□ -1.76
BBS4-218	ENST00000569440	SULT1C2	O00338	296 aa		4.04	□□□□□ -1.76
BBS4-218	ENST00000569440	TNFSF12	O43508	249 aa		4.04	□□□□□ -1.76
BBS4-218	ENST00000569440	CLN5	O75503	358 aa		4.04	□□□□□ -1.76
BBS4-218	ENST00000569440	CTXN2	P0C2S0	81 aa		4.04	□□□□□ -1.76
BBS4-218	ENST00000569440	ID1	P41134	155 aa		4.04	□□□□□ -1.76
BBS4-218	ENST00000569440	CD300C	Q08708	224 aa		4.04	□□□□□ -1.76
BBS4-218	ENST00000569440	P2RY14	Q15391	338 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms