RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 Q6ZR54 194 aa11.28□□□□□ -0.6
HERPUD1-215ENST00000568676 ZNF767PQ75MW2 155 aa11.28□□□□□ -0.6
HERPUD1-215ENST00000568676 RRNAD1Q96FB5 475 aaKnown RBP11.28□□□□□ -0.6
HERPUD1-215ENST00000568676 MRPL36Q9P0J6 103 aaKnown RBP11.28□□□□□ -0.6
HERPUD1-215ENST00000568676 XCL2Q9UBD3 114 aa11.28□□□□□ -0.6
HERPUD1-215ENST00000568676 MUC4Q99102 2169 aa11.27□□□□□ -0.6
HERPUD1-215ENST00000568676 C3orf85A0A1B0GTC6 90 aa11.27□□□□□ -0.61
HERPUD1-215ENST00000568676 ZNF705FA8MVS1 300 aaPredicted RBP11.27□□□□□ -0.61
HERPUD1-215ENST00000568676 APOA1P02647 267 aa11.27□□□□□ -0.61
HERPUD1-215ENST00000568676 IGLC1P0CG04 106 aa11.27□□□□□ -0.61
HERPUD1-215ENST00000568676 ZNF705DP0CH99 300 aaPredicted RBP11.27□□□□□ -0.61
HERPUD1-215ENST00000568676 ZNF705BP0CI00 300 aaPredicted RBP11.27□□□□□ -0.61
HERPUD1-215ENST00000568676 HLA-DRB4P13762 266 aa11.27□□□□□ -0.61
HERPUD1-215ENST00000568676 NUP62P37198 522 aaPredicted RBP11.27□□□□□ -0.61
HERPUD1-215ENST00000568676 RPS19P39019 145 aaKnown RBP11.27□□□□□ -0.61
HERPUD1-215ENST00000568676 NKX2-1P43699 371 aaPredicted RBP11.27□□□□□ -0.61
HERPUD1-215ENST00000568676 PIGPP57054 158 aa11.27□□□□□ -0.61
HERPUD1-215ENST00000568676 SPCS3P61009 180 aa11.27□□□□□ -0.61
HERPUD1-215ENST00000568676 TIGITQ495A1 244 aa11.27□□□□□ -0.61
HERPUD1-215ENST00000568676 AARDQ4LEZ3 155 aa11.27□□□□□ -0.61
HERPUD1-215ENST00000568676 FAM219AQ8IW50 185 aa11.27□□□□□ -0.61
HERPUD1-215ENST00000568676 ARRDC1Q8N5I2 433 aa11.27□□□□□ -0.61
HERPUD1-215ENST00000568676 OR52E5Q8NH55 327 aa11.27□□□□□ -0.61
HERPUD1-215ENST00000568676 RNASEH2CQ8TDP1 164 aaKnown RBP11.27□□□□□ -0.61
HERPUD1-215ENST00000568676 HLA-DRB4X5D2U9 266 aa11.27□□□□□ -0.61
HERPUD1-215ENST00000568676 DNAH17Q9UFH2 4485 aa11.27□□□□□ -0.61
HERPUD1-215ENST00000568676 DNAH11Q96DT5 4516 aa11.26□□□□□ -0.61
HERPUD1-215ENST00000568676 OXA1LQ15070 435 aa11.26□□□□□ -0.61
HERPUD1-215ENST00000568676 MLANAQ16655 118 aa11.26□□□□□ -0.61
HERPUD1-215ENST00000568676 TRIM16LQ309B1 348 aa11.26□□□□□ -0.61
HERPUD1-215ENST00000568676 ETFRF1Q6IPR1 90 aa11.26□□□□□ -0.61
HERPUD1-215ENST00000568676 SIGLEC15Q6ZMC9 328 aa11.26□□□□□ -0.61
HERPUD1-215ENST00000568676 Q6ZRM9 215 aa11.26□□□□□ -0.61
HERPUD1-215ENST00000568676 CCDC71LQ8N9Z2 235 aa11.26□□□□□ -0.61
HERPUD1-215ENST00000568676 CLUHP3Q96NS8 147 aa11.26□□□□□ -0.61
HERPUD1-215ENST00000568676 TP53RKQ96S44 253 aa11.26□□□□□ -0.61
HERPUD1-215ENST00000568676 CACFD1Q9UGQ2 172 aa11.26□□□□□ -0.61
HERPUD1-215ENST00000568676 PFDN2Q9UHV9 154 aa11.26□□□□□ -0.61
HERPUD1-215ENST00000568676 RFNGQ9Y644 331 aa11.26□□□□□ -0.61
HERPUD1-215ENST00000568676 TBPP20226 339 aa11.25□□□□□ -0.61
HERPUD1-215ENST00000568676 OR10J1P30954 320 aa11.25□□□□□ -0.61
HERPUD1-215ENST00000568676 FAM3BP58499 235 aaPredicted RBP11.25□□□□□ -0.61
HERPUD1-215ENST00000568676 C2orf83Q53S99 150 aa11.25□□□□□ -0.61
HERPUD1-215ENST00000568676 PRSS54Q6PEW0 395 aa11.25□□□□□ -0.61
HERPUD1-215ENST00000568676 LHFPL1Q86WI0 220 aa11.25□□□□□ -0.61
HERPUD1-215ENST00000568676 RNASE11Q8TAA1 199 aaKnown RBP11.25□□□□□ -0.61
HERPUD1-215ENST00000568676 ZFAND1Q8TCF1 268 aa11.25□□□□□ -0.61
HERPUD1-215ENST00000568676 COPZ2Q9P299 210 aa11.25□□□□□ -0.61
HERPUD1-215ENST00000568676 BUB3O43684 328 aa11.24□□□□□ -0.61
HERPUD1-215ENST00000568676 IL4P05112 153 aa11.24□□□□□ -0.61
HERPUD1-215ENST00000568676 UCP1P25874 307 aa11.24□□□□□ -0.61
HERPUD1-215ENST00000568676 RND2P52198 227 aa11.24□□□□□ -0.61
HERPUD1-215ENST00000568676 DHODHQ02127 395 aa11.24□□□□□ -0.61
HERPUD1-215ENST00000568676 RNASE10Q5GAN6 216 aaKnown RBP11.24□□□□□ -0.61
HERPUD1-215ENST00000568676 C1orf134Q5TEV5 83 aa11.24□□□□□ -0.61
HERPUD1-215ENST00000568676 SPATA31B1PQ5VZV4 182 aa11.24□□□□□ -0.61
HERPUD1-215ENST00000568676 NOXA1Q86UR1 476 aa11.24□□□□□ -0.61
HERPUD1-215ENST00000568676 SNX29P2Q8IUI4 249 aa11.24□□□□□ -0.61
HERPUD1-215ENST00000568676 YIPF6Q96EC8 236 aa11.24□□□□□ -0.61
HERPUD1-215ENST00000568676 NIPSNAP3BQ9BS92 247 aa11.24□□□□□ -0.61
HERPUD1-215ENST00000568676 SCRT1Q9BWW7 348 aa11.24□□□□□ -0.61
HERPUD1-215ENST00000568676 MRPS26Q9BYN8 205 aaKnown RBP11.24□□□□□ -0.61
HERPUD1-215ENST00000568676 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.24□□□□□ -0.61
HERPUD1-215ENST00000568676 DKK2Q9UBU2 259 aa11.24□□□□□ -0.61
HERPUD1-215ENST00000568676 DYNC1H1Q14204 4646 aaKnown RBP11.23□□□□□ -0.61
HERPUD1-215ENST00000568676 TOMM40O96008 361 aa11.23□□□□□ -0.61
HERPUD1-215ENST00000568676 USF2Q15853 346 aaPredicted RBP11.23□□□□□ -0.61
HERPUD1-215ENST00000568676 HEYLQ9NQ87 328 aaPredicted RBP11.23□□□□□ -0.61
HERPUD1-215ENST00000568676 COMMD3Q9UBI1 195 aa11.23□□□□□ -0.61
HERPUD1-215ENST00000568676 PKD1P98161 4303 aa11.23□□□□□ -0.61
HERPUD1-215ENST00000568676 IGLV2-18A0A075B6J9 118 aa11.22□□□□□ -0.61
HERPUD1-215ENST00000568676 M0QYG6 137 aa11.22□□□□□ -0.61
HERPUD1-215ENST00000568676 RD3LP0DJH9 198 aa11.22□□□□□ -0.61
HERPUD1-215ENST00000568676 PI3P19957 117 aa11.22□□□□□ -0.61
HERPUD1-215ENST00000568676 TGFBR1P36897 503 aa11.22□□□□□ -0.61
HERPUD1-215ENST00000568676 ID1P41134 155 aa11.22□□□□□ -0.61
HERPUD1-215ENST00000568676 EMP1P54849 157 aa11.22□□□□□ -0.61
HERPUD1-215ENST00000568676 FOXI2Q6ZQN5 318 aa11.22□□□□□ -0.61
HERPUD1-215ENST00000568676 SLC24A4Q8NFF2 622 aa11.22□□□□□ -0.61
HERPUD1-215ENST00000568676 ABHD1Q96SE0 405 aa11.22□□□□□ -0.61
HERPUD1-215ENST00000568676 CDS2O95674 445 aa11.21□□□□□ -0.61
HERPUD1-215ENST00000568676 SMIM18P0DKX4 95 aa11.21□□□□□ -0.61
HERPUD1-215ENST00000568676 FAM222AQ5U5X8 452 aa11.21□□□□□ -0.61
HERPUD1-215ENST00000568676 FUNDC2Q9BWH2 189 aa11.21□□□□□ -0.61
HERPUD1-215ENST00000568676 SAV1Q9H4B6 383 aaPredicted RBP11.21□□□□□ -0.61
HERPUD1-215ENST00000568676 GOLT1BQ9Y3E0 138 aa11.21□□□□□ -0.61
HERPUD1-215ENST00000568676 A0A0G2JRQ6 117 aa11.2□□□□□ -0.62
HERPUD1-215ENST00000568676 CDK2AP2O75956 126 aa11.2□□□□□ -0.62
HERPUD1-215ENST00000568676 PSMB3P49720 205 aa11.2□□□□□ -0.62
HERPUD1-215ENST00000568676 LSM3P62310 102 aaKnown RBP11.2□□□□□ -0.62
HERPUD1-215ENST00000568676 SP6Q3SY56 376 aa11.2□□□□□ -0.62
HERPUD1-215ENST00000568676 SAMD13Q5VXD3 122 aa11.2□□□□□ -0.62
HERPUD1-215ENST00000568676 OR8G2PQ6IF36 304 aa11.2□□□□□ -0.62
HERPUD1-215ENST00000568676 ZNF575Q86XF7 245 aa11.2□□□□□ -0.62
HERPUD1-215ENST00000568676 C15orf53Q8NAA6 179 aa11.2□□□□□ -0.62
HERPUD1-215ENST00000568676 TERB2Q8NHR7 220 aa11.2□□□□□ -0.62
HERPUD1-215ENST00000568676 C15orf40Q8WUR7 153 aa11.2□□□□□ -0.62
HERPUD1-215ENST00000568676 RBPMSQ93062 196 aaKnown RBP11.2□□□□□ -0.62
HERPUD1-215ENST00000568676 TMEM222Q9H0R3 208 aa11.2□□□□□ -0.62
HERPUD1-215ENST00000568676 PLA2G2EQ9NZK7 142 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms