RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 PMCHL2Q9BQD1 86 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 CLEC7AQ9BXN2 247 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 TMEM191AQ9H0A3 160 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 RPP21Q9H633 154 aaKnown RBP6.18□□□□□ -1.42
ATXN3-250ENST00000568290 GNB4Q9HAV0 340 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 AURKAIP1Q9NWT8 199 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-250ENST00000568290 C1RLQ9NZP8 487 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 HSPB8Q9UJY1 196 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 KIAA2026Q5HYC2 2103 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 IGHV1-69-2A0A0G2JMI3 117 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 PGPA6NDG6 321 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 OOSP1A8MZH6 123 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 M0R2Z0 102 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 TFF1P04155 84 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 LIPFP07098 398 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 CRYGCP07315 174 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 CT45A10P0DMU9 189 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 REG1BP48304 166 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 RAB9AP51151 201 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 RPS20P60866 119 aaKnown RBP6.17□□□□□ -1.42
ATXN3-250ENST00000568290 FAM27E3Q08E93 113 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 OR5I1Q13606 314 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 PDE6HQ13956 83 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 MMDQ15546 238 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 PRSS8Q16651 343 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 SPATA45Q537H7 98 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 FAM53AQ6NSI3 398 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-250ENST00000568290 CCDC144NLQ6NUI1 221 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 TCF23Q7RTU1 214 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 NHLRC2Q8NBF2 726 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 ST6GALNAC3Q8NDV1 305 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 OR1B1Q8NGR6 318 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 CCL17Q92583 94 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 RNASE6Q93091 150 aaKnown RBP6.17□□□□□ -1.42
ATXN3-250ENST00000568290 LEAP2Q969E1 77 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 RPEQ96AT9 228 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 C1orf159Q96HA4 380 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 FAM167A-AS1Q96KT0 104 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 RNASE7Q9H1E1 156 aaKnown RBP6.17□□□□□ -1.42
ATXN3-250ENST00000568290 JKAMPQ9P055 326 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 MRPS16Q9Y3D3 137 aaKnown RBP6.17□□□□□ -1.42
ATXN3-250ENST00000568290 F11RQ9Y624 299 aaKnown RBP6.17□□□□□ -1.42
ATXN3-250ENST00000568290 TECTAO75443 2155 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 KNTC1P50748 2209 aa6.17□□□□□ -1.42
ATXN3-250ENST00000568290 TRIOBPQ9H2D6 2365 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 DOCK7Q96N67 2140 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 USF3Q68DE3 2245 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 A0A1W2PS18 150 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 PSMB11A5LHX3 300 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 SRRM4A7MD48 611 aaKnown RBP6.16□□□□□ -1.42
ATXN3-250ENST00000568290 HIGD1CA8MV81 97 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 BMPR1BO00238 502 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 KLK10O43240 276 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 SLC25A17O43808 307 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 DEFA4P12838 97 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 ORM2P19652 201 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 PSG9Q00887 426 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 BSPH1Q075Z2 132 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 TNXAQ16473 311 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 CDPF1Q6NVV7 123 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 MRPL54Q6P161 138 aaKnown RBP6.16□□□□□ -1.42
ATXN3-250ENST00000568290 Q6ZWC4 215 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 PPP1R27Q86WC6 154 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 NUDT10Q8NFP7 164 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 OR8B3Q8NGG8 313 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 OR2T6Q8NHC8 308 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 ST6GALNAC6Q969X2 333 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 FXYD5Q96DB9 178 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 SNRNP40Q96DI7 357 aaKnown RBP6.16□□□□□ -1.42
ATXN3-250ENST00000568290 MBD6Q96DN6 1003 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 NUDT11Q96G61 164 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 WFIKKN1Q96NZ8 548 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 OR8B2Q96RD0 313 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 NEU1Q99519 415 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 NDFIP1Q9BT67 221 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 FAM103A1Q9BTL3 118 aaKnown RBP6.16□□□□□ -1.42
ATXN3-250ENST00000568290 TMEM70Q9BUB7 260 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 AAMDCQ9H7C9 122 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 ST20Q9HBF5 79 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 PAM16Q9Y3D7 125 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 CBY1Q9Y3M2 126 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 WDR87Q6ZQQ6 2873 aa6.16□□□□□ -1.42
ATXN3-250ENST00000568290 RANBP2P49792 3224 aaKnown RBP6.16□□□□□ -1.42
ATXN3-250ENST00000568290 CHD3Q12873 2000 aaKnown RBP6.15□□□□□ -1.42
ATXN3-250ENST00000568290 IGKV1OR2-108A0A075B7D4 117 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 TRAV9-2A0A087WT02 112 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.15□□□□□ -1.42
ATXN3-250ENST00000568290 TNFRSF13BO14836 293 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-250ENST00000568290 CNIH1O95406 144 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 LTAP01374 205 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 IGLV2-8P01709 118 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 MYCNOSP40205 109 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 UCNP55089 124 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 WT1-ASQ06250 92 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 FXYD3Q14802 87 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 ZNF124Q15973 351 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 MSMPQ1L6U9 139 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 SAPCD1Q5SSQ6 148 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 Q6ZN92 141 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 MOB3BQ86TA1 216 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms