RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 HIST1H2BNQ99877 126 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 HIST1H2BMQ99879 126 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 OPN3Q9H1Y3 402 aaPredicted RBP4.26□□□□□ -1.73
CAPN3-217ENST00000567817 PARLQ9H300 379 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 VSIRQ9H7M9 311 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 SLC25A22Q9H936 323 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 PLEKHA3Q9HB20 300 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 NGBQ9NPG2 151 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 NIT2Q9NQR4 276 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 TMEM167BQ9NRX6 74 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 TMEM14BQ9NUH8 114 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 SLC25A10Q9UBX3 287 aaPredicted RBP4.26□□□□□ -1.73
CAPN3-217ENST00000567817 LSM4Q9Y4Z0 139 aaKnown RBP4.26□□□□□ -1.73
CAPN3-217ENST00000567817 NCKAP5O14513 1909 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 TGIF2-C20orf24A0A0A6YYL0 155 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 TRAV38-1A0A0B4J264 116 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 A8MXE2 369 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 C9JCJ5 164 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 M0R1B8 84 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 GGCTO75223 188 aaKnown RBP4.25□□□□□ -1.73
CAPN3-217ENST00000567817 IGKV1D-33P01593 117 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 IGKV1-33P01594 117 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 APOA2P02652 100 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 TRGC2P03986 189 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 PFN1P07737 140 aaKnown RBP4.25□□□□□ -1.73
CAPN3-217ENST00000567817 CXCL1P09341 107 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 CGB3P0DN86 165 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 CGB7P0DN87 165 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 AREGP15514 252 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 NPY1RP25929 384 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 PDLIM4P50479 330 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 NDUFA6P56556 154 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 EDDM3BP56851 147 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 TAS2R45P59539 299 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 MRPS11P82912 194 aaKnown RBP4.25□□□□□ -1.73
CAPN3-217ENST00000567817 TNFAIP6P98066 277 aaPredicted RBP4.25□□□□□ -1.73
CAPN3-217ENST00000567817 PRCDQ00LT1 54 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 C17orf58Q2M2W7 97 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 BTNL3Q6UXE8 466 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 PQLC2Q6ZP29 291 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 MOGAT3Q86VF5 341 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 TMEM183AQ8IXX5 376 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 UBALD1Q8TB05 177 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 RNASEH2CQ8TDP1 164 aaKnown RBP4.25□□□□□ -1.73
CAPN3-217ENST00000567817 CACNG8Q8WXS5 425 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 C11orf52Q96A22 123 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 PCGF1Q9BSM1 259 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 BET1LQ9NYM9 111 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 IDI2-AS1Q9NZ38 188 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 MIOXQ9UGB7 285 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 TCF19Q9Y242 345 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 LINC00312Q9Y6C7 94 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 PXMP4Q9Y6I8 212 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 URGCP-MRPS24S4R325 110 aa4.25□□□□□ -1.73
CAPN3-217ENST00000567817 NOTCH1P46531 2555 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 ZANQ9Y493 2812 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 SAA2-SAA4A0A096LPE2 208 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 TRBV9A0A0B4J1U6 114 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 IGHV3-43A0A0B4J1X8 118 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 MDFIC2A0A1B0GVS7 189 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 A0A1W2PN81 502 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 A0A1W2PPE3 182 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 PRSS46E5RG02 174 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 TSTD3H0UI37 97 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 C16orf97H3BN30 126 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 DVL1O14640 695 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 ZNHIT1O43257 154 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 GATCO43716 136 aaKnown RBP4.24□□□□□ -1.73
CAPN3-217ENST00000567817 PAGE4O60829 102 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 FSTL3O95633 263 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 IGHV1-46P01743 117 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 IGHV2-70P01814 119 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 GYPAP02724 150 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 OR9G9P0C7N8 305 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 TRGC1P0CF51 173 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 SAA2P0DJI9 122 aaPredicted RBP4.24□□□□□ -1.73
CAPN3-217ENST00000567817 IGHV3-43DP0DP04 118 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 HIST1H1BP16401 226 aaKnown RBP4.24□□□□□ -1.73
CAPN3-217ENST00000567817 IL3RAP26951 378 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 CHRNA7P36544 502 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 GPX4P36969 197 aaPredicted RBP4.24□□□□□ -1.73
CAPN3-217ENST00000567817 ZNF83P51522 516 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 SUB1P53999 127 aaKnown RBP eCLIP4.24□□□□□ -1.73
CAPN3-217ENST00000567817 ERHP84090 104 aaKnown RBP4.24□□□□□ -1.73
CAPN3-217ENST00000567817 FBXL19-AS1Q494R0 122 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 C2orf83Q53S99 150 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 NCMAPQ5T1S8 102 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 OR4A47Q6IF82 309 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 ZNF343Q6P1L6 599 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 SLC25A48Q6ZT89 311 aaKnown RBP4.24□□□□□ -1.73
CAPN3-217ENST00000567817 ZNF833PQ6ZTB9 187 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 C18orf65Q6ZTR6 163 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 SSX7Q7RTT5 188 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 SLC16A13Q7RTY0 426 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 C16orf82Q7Z2V1 217 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 TMEM144Q7Z5S9 345 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 LINC01551Q86U37 167 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 PDPNQ86YL7 162 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 LYG1Q8N1E2 194 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 HIST3H2BBQ8N257 126 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms