RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 MDFIC2A0A1B0GVS7 189 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 A0A1W2PN81 502 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 TMEM218A2RU14 115 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 J3QKU1 62 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 IGHV1-69P01742 117 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 MSMBP08118 114 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 FBP1P09467 338 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 LINC00869P0C866 280 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 TMEM11P17152 192 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 BTF3P20290 206 aaKnown RBP4.51□□□□□ -1.69
SF3B3-210ENST00000567654 CHRNA7P36544 502 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 CEACAM3P40198 252 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 RPP30P78346 268 aaKnown RBP4.51□□□□□ -1.69
SF3B3-210ENST00000567654 SERF2P84101 59 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 DEFA5Q01523 94 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 GUCA2BQ16661 112 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 HAGHQ16775 308 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 C5orf64Q2M2E5 130 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 DEFB113Q30KQ7 82 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 C10orf91Q5T1B1 145 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 UQCC3Q6UW78 93 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 SLC16A13Q7RTY0 426 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 RNF152Q8N8N0 203 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 Q8N9W7 124 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 ZNF114Q8NC26 417 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 OR10G4Q8NGN3 311 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 OR10G9Q8NGN4 311 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 OR10G7Q8NGN6 311 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 OR2T10Q8NGZ9 312 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 SFT2D1Q8WV19 159 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 MBD3L1Q8WWY6 194 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 NARS2Q96I59 477 aaKnown RBP4.51□□□□□ -1.69
SF3B3-210ENST00000567654 RNF5Q99942 180 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 HSPB9Q9BQS6 159 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 GGACTQ9BVM4 153 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 NPVFQ9HCQ7 196 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 TREM1Q9NP99 234 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 PXMP4Q9Y6I8 212 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 IGHV7-81A0A0B4J1V7 117 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 CTXND1A0A1B0GTU2 59 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 MAP1LC3B2A6NCE7 125 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 LINC01548A6NM66 108 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 OOSP1A8MZH6 123 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 KRBOX1C9JBD0 128 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 FNDC10F2Z333 226 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 APOC3P02656 99 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 SRP19P09132 144 aaKnown RBP4.5□□□□□ -1.69
SF3B3-210ENST00000567654 SFTA3P0C7M3 94 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 SLC25A16P16260 332 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 CTRB1P17538 263 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 OR10J1P30954 320 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 MAS1LP35410 378 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 OPRK1P41145 380 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 DSCR9P59020 149 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 ERHP84090 104 aaKnown RBP4.5□□□□□ -1.69
SF3B3-210ENST00000567654 PMS2P11Q13670 270 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 PLGLAQ15195 96 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 FAM209BQ5JX69 171 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 Q5PR19 223 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 CTRB2Q6GPI1 263 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 CCDC144NLQ6NUI1 221 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 DPPA3Q6W0C5 159 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 TMEM219Q86XT9 240 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 PIFOQ8TCI5 191 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 MALSU1Q96EH3 234 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 ACY3Q96HD9 319 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 MAP1LC3BQ9GZQ8 125 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 HIF1ANQ9NWT6 349 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 KIAA1456Q9P272 454 aa4.5□□□□□ -1.69
SF3B3-210ENST00000567654 F11RQ9Y624 299 aaKnown RBP4.5□□□□□ -1.69
SF3B3-210ENST00000567654 ITPR3Q14573 2671 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 TRAV1-1A0A0B4J248 108 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 PSMB11A5LHX3 300 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 RBFOX3A6NFN3 312 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 ZFP92A6NM28 416 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 NCBP2LA6PVI3 153 aaKnown RBP4.49□□□□□ -1.69
SF3B3-210ENST00000567654 SEC14L6B5MCN3 397 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 C17orf112F2Z3M2 114 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 F8W036 122 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 I3L2K1 104 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 AP4M1O00189 453 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 MPDU1O75352 247 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 ACTL6BO94805 426 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 MT-CO2P00403 227 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 CRYGCP07315 174 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 IGHV4-31P0DP07 118 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 M6PRP20645 277 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 GPX4P36969 197 aaPredicted RBP4.49□□□□□ -1.69
SF3B3-210ENST00000567654 NPBWR1P48145 328 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 CDC34P49427 236 aaPredicted RBP4.49□□□□□ -1.69
SF3B3-210ENST00000567654 PPT1P50897 306 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 RND2P52198 227 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 B2MP61769 119 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 CX3CL1P78423 397 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 ZNF90Q03938 601 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 FXYD3Q14802 87 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 ZNF506Q5JVG8 444 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 MORN5Q5VZ52 161 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 MIR17HGQ75NE6 70 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 TMEM144Q7Z5S9 345 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms