RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 ACY3Q96HD9 319 aa9.29□□□□□ -0.92
SF3B3-208ENST00000567250 DAZ1Q9NQZ3 744 aaKnown RBP9.29□□□□□ -0.92
SF3B3-208ENST00000567250 IGHV3-35A0A0C4DH35 117 aa9.28□□□□□ -0.92
SF3B3-208ENST00000567250 C2orf70A6NJV1 201 aa9.28□□□□□ -0.92
SF3B3-208ENST00000567250 ZFP92A6NM28 416 aa9.28□□□□□ -0.92
SF3B3-208ENST00000567250 DEDDO75618 318 aa9.28□□□□□ -0.92
SF3B3-208ENST00000567250 YIF1AO95070 293 aa9.28□□□□□ -0.92
SF3B3-208ENST00000567250 SIX6O95475 246 aa9.28□□□□□ -0.92
SF3B3-208ENST00000567250 BMI1P35226 326 aa9.28□□□□□ -0.92
SF3B3-208ENST00000567250 H2BFSP57053 126 aa9.28□□□□□ -0.92
SF3B3-208ENST00000567250 AKR1C1Q04828 323 aa9.28□□□□□ -0.92
SF3B3-208ENST00000567250 EGFEM1PQ0D2K5 195 aa9.28□□□□□ -0.92
SF3B3-208ENST00000567250 IL15RAQ13261 267 aa9.28□□□□□ -0.92
SF3B3-208ENST00000567250 BEAN1Q3B7T3 259 aa9.28□□□□□ -0.92
SF3B3-208ENST00000567250 OR8G2PQ6IF36 304 aa9.28□□□□□ -0.92
SF3B3-208ENST00000567250 TMEM14EPQ6UXP3 125 aa9.28□□□□□ -0.92
SF3B3-208ENST00000567250 ACOT7LQ6ZUV0 252 aa9.28□□□□□ -0.92
SF3B3-208ENST00000567250 STX12Q86Y82 276 aa9.28□□□□□ -0.92
SF3B3-208ENST00000567250 OR10P1Q8NGE3 313 aa9.28□□□□□ -0.92
SF3B3-208ENST00000567250 OR2K2Q8NGT1 345 aa9.28□□□□□ -0.92
SF3B3-208ENST00000567250 C20orf24Q9BUV8 137 aa9.28□□□□□ -0.92
SF3B3-208ENST00000567250 LYRM2Q9NU23 88 aaPredicted RBP9.28□□□□□ -0.92
SF3B3-208ENST00000567250 NOTCH1P46531 2555 aa9.28□□□□□ -0.92
SF3B3-208ENST00000567250 TMEM213A2RRL7 107 aa9.27□□□□□ -0.93
SF3B3-208ENST00000567250 PRSS46E5RG02 174 aa9.27□□□□□ -0.93
SF3B3-208ENST00000567250 E5RGE8 158 aa9.27□□□□□ -0.93
SF3B3-208ENST00000567250 FNDC10F2Z333 226 aa9.27□□□□□ -0.93
SF3B3-208ENST00000567250 K7EMT4 169 aa9.27□□□□□ -0.93
SF3B3-208ENST00000567250 METTL15P1P0C7V9 234 aa9.27□□□□□ -0.93
SF3B3-208ENST00000567250 IGLC1P0CG04 106 aa9.27□□□□□ -0.93
SF3B3-208ENST00000567250 PAX9P55771 341 aa9.27□□□□□ -0.93
SF3B3-208ENST00000567250 YPEL3P61236 119 aaPredicted RBP9.27□□□□□ -0.93
SF3B3-208ENST00000567250 DLK1P80370 383 aa9.27□□□□□ -0.93
SF3B3-208ENST00000567250 GAMTQ14353 236 aa9.27□□□□□ -0.93
SF3B3-208ENST00000567250 MLANAQ16655 118 aa9.27□□□□□ -0.93
SF3B3-208ENST00000567250 LRRC37A5PQ49AS3 106 aa9.27□□□□□ -0.93
SF3B3-208ENST00000567250 LCN12Q6JVE5 192 aa9.27□□□□□ -0.93
SF3B3-208ENST00000567250 UNQ9165/PRO28630Q6UXU0 137 aa9.27□□□□□ -0.93
SF3B3-208ENST00000567250 PPP1R1CQ8WVI7 109 aa9.27□□□□□ -0.93
SF3B3-208ENST00000567250 NPIPB3Q92617 1050 aa9.27□□□□□ -0.93
SF3B3-208ENST00000567250 TECRQ9NZ01 308 aaKnown RBP9.27□□□□□ -0.93
SF3B3-208ENST00000567250 MRPL36Q9P0J6 103 aaKnown RBP9.27□□□□□ -0.93
SF3B3-208ENST00000567250 MRPL27Q9P0M9 148 aaKnown RBP9.27□□□□□ -0.93
SF3B3-208ENST00000567250 NOTCH3Q9UM47 2321 aa9.26□□□□□ -0.93
SF3B3-208ENST00000567250 MEGF8Q7Z7M0 2845 aa9.26□□□□□ -0.93
SF3B3-208ENST00000567250 SMCO3A2RU48 225 aa9.26□□□□□ -0.93
SF3B3-208ENST00000567250 TOMM40O96008 361 aa9.26□□□□□ -0.93
SF3B3-208ENST00000567250 IGLV1-51P01701 117 aa9.26□□□□□ -0.93
SF3B3-208ENST00000567250 CSN3P07498 182 aa9.26□□□□□ -0.93
SF3B3-208ENST00000567250 FOLR2P14207 255 aa9.26□□□□□ -0.93
SF3B3-208ENST00000567250 RRAS2P62070 204 aaPredicted RBP9.26□□□□□ -0.93
SF3B3-208ENST00000567250 HBG1P69891 147 aa9.26□□□□□ -0.93
SF3B3-208ENST00000567250 HBG2P69892 147 aa9.26□□□□□ -0.93
SF3B3-208ENST00000567250 Q8WTZ3 238 aa9.26□□□□□ -0.93
SF3B3-208ENST00000567250 NARS2Q96I59 477 aaKnown RBP9.26□□□□□ -0.93
SF3B3-208ENST00000567250 GGACTQ9BVM4 153 aa9.26□□□□□ -0.93
SF3B3-208ENST00000567250 PUS1Q9Y606 427 aaKnown RBP eCLIP9.26□□□□□ -0.93
SF3B3-208ENST00000567250 CFDP00746 253 aaPredicted RBP9.25□□□□□ -0.93
SF3B3-208ENST00000567250 IGKV1-17P01599 117 aa9.25□□□□□ -0.93
SF3B3-208ENST00000567250 CBLN1P23435 193 aa9.25□□□□□ -0.93
SF3B3-208ENST00000567250 P2RY1P47900 373 aa9.25□□□□□ -0.93
SF3B3-208ENST00000567250 SULT1A1P50225 295 aa9.25□□□□□ -0.93
SF3B3-208ENST00000567250 FGL1Q08830 312 aa9.25□□□□□ -0.93
SF3B3-208ENST00000567250 TIGITQ495A1 244 aa9.25□□□□□ -0.93
SF3B3-208ENST00000567250 TOMM20LQ6UXN7 152 aa9.25□□□□□ -0.93
SF3B3-208ENST00000567250 IL34Q6ZMJ4 242 aa9.25□□□□□ -0.93
SF3B3-208ENST00000567250 LILRB2Q8N423 598 aa9.25□□□□□ -0.93
SF3B3-208ENST00000567250 TRGV9Q99603 122 aa9.25□□□□□ -0.93
SF3B3-208ENST00000567250 SLC25A31Q9H0C2 315 aa9.25□□□□□ -0.93
SF3B3-208ENST00000567250 C11orf1Q9H5F2 150 aa9.25□□□□□ -0.93
SF3B3-208ENST00000567250 TMEM231Q9H6L2 316 aa9.25□□□□□ -0.93
SF3B3-208ENST00000567250 ZFAND3Q9H8U3 227 aa9.25□□□□□ -0.93
SF3B3-208ENST00000567250 ZNF256Q9Y2P7 627 aaPredicted RBP9.25□□□□□ -0.93
SF3B3-208ENST00000567250 TRAV14DV4A0A0A6YYC5 116 aa9.24□□□□□ -0.93
SF3B3-208ENST00000567250 PMS2P5A8MQ11 134 aa9.24□□□□□ -0.93
SF3B3-208ENST00000567250 J3QL48 77 aa9.24□□□□□ -0.93
SF3B3-208ENST00000567250 MPC2O95563 127 aa9.24□□□□□ -0.93
SF3B3-208ENST00000567250 GIPP09681 153 aaPredicted RBP9.24□□□□□ -0.93
SF3B3-208ENST00000567250 RD3LP0DJH9 198 aa9.24□□□□□ -0.93
SF3B3-208ENST00000567250 NUP62P37198 522 aaPredicted RBP9.24□□□□□ -0.93
SF3B3-208ENST00000567250 BAXQ07812 192 aa9.24□□□□□ -0.93
SF3B3-208ENST00000567250 SLC38A11Q08AI6 406 aa9.24□□□□□ -0.93
SF3B3-208ENST00000567250 FCN2Q15485 313 aa9.24□□□□□ -0.93
SF3B3-208ENST00000567250 TM4SF20Q53R12 229 aa9.24□□□□□ -0.93
SF3B3-208ENST00000567250 TMEM144Q7Z5S9 345 aa9.24□□□□□ -0.93
SF3B3-208ENST00000567250 TMEM252Q8N6L7 170 aa9.24□□□□□ -0.93
SF3B3-208ENST00000567250 THAP8Q8NA92 274 aa9.24□□□□□ -0.93
SF3B3-208ENST00000567250 OR11H7Q8NGC8 314 aa9.24□□□□□ -0.93
SF3B3-208ENST00000567250 OR51G1Q8NGK1 321 aa9.24□□□□□ -0.93
SF3B3-208ENST00000567250 METTL26Q96S19 204 aa9.24□□□□□ -0.93
SF3B3-208ENST00000567250 NPVFQ9HCQ7 196 aa9.24□□□□□ -0.93
SF3B3-208ENST00000567250 CMYA5Q8N3K9 4069 aa9.24□□□□□ -0.93
SF3B3-208ENST00000567250 IGHV7-4-1A0A0J9YVY3 117 aa9.23□□□□□ -0.93
SF3B3-208ENST00000567250 A0A1W2PS18 150 aa9.23□□□□□ -0.93
SF3B3-208ENST00000567250 FAM24AA6NFZ4 105 aa9.23□□□□□ -0.93
SF3B3-208ENST00000567250 IL4P05112 153 aa9.23□□□□□ -0.93
SF3B3-208ENST00000567250 CD5P06127 495 aa9.23□□□□□ -0.93
SF3B3-208ENST00000567250 C8orf88P0DMB2 117 aa9.23□□□□□ -0.93
SF3B3-208ENST00000567250 CXCL3P19876 107 aa9.23□□□□□ -0.93
SF3B3-208ENST00000567250 S100A7P31151 101 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms