RNA–Protein interactions for RNA: ENST00000566828.5

EDC3-212, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-212ENST00000566828 FAM210BQ96KR6 192 aa11.48□□□□□ -0.57
EDC3-212ENST00000566828 NEU1Q99519 415 aa11.48□□□□□ -0.57
EDC3-212ENST00000566828 ENY2Q9NPA8 101 aa11.48□□□□□ -0.57
EDC3-212ENST00000566828 TMEM189A5PLL7 270 aa11.47□□□□□ -0.57
EDC3-212ENST00000566828 IGKV1-5P01602 117 aa11.47□□□□□ -0.57
EDC3-212ENST00000566828 IGKV3-20P01619 116 aa11.47□□□□□ -0.57
EDC3-212ENST00000566828 HNRNPCP07910 306 aaKnown RBP eCLIP11.47□□□□□ -0.57
EDC3-212ENST00000566828 HLA-DRB4P13762 266 aa11.47□□□□□ -0.57
EDC3-212ENST00000566828 AKR1C2P52895 323 aa11.47□□□□□ -0.57
EDC3-212ENST00000566828 NIPSNAP3BQ9BS92 247 aa11.47□□□□□ -0.57
EDC3-212ENST00000566828 COMMD3Q9UBI1 195 aa11.47□□□□□ -0.57
EDC3-212ENST00000566828 DKK2Q9UBU2 259 aa11.47□□□□□ -0.57
EDC3-212ENST00000566828 U3KQE9 123 aa11.47□□□□□ -0.57
EDC3-212ENST00000566828 HLA-DRB4X5D2U9 266 aa11.47□□□□□ -0.57
EDC3-212ENST00000566828 APOBP04114 4563 aaKnown RBP11.46□□□□□ -0.57
EDC3-212ENST00000566828 INS-IGF2F8WCM5 200 aa11.46□□□□□ -0.57
EDC3-212ENST00000566828 RCVRNP35243 200 aa11.46□□□□□ -0.57
EDC3-212ENST00000566828 DEFB1P60022 68 aa11.46□□□□□ -0.57
EDC3-212ENST00000566828 GDF5OSQ5U4N7 250 aa11.46□□□□□ -0.57
EDC3-212ENST00000566828 TMEM88Q6PEY1 159 aa11.46□□□□□ -0.57
EDC3-212ENST00000566828 GPX8Q8TED1 209 aa11.46□□□□□ -0.57
EDC3-212ENST00000566828 NRN1Q9NPD7 142 aa11.46□□□□□ -0.57
EDC3-212ENST00000566828 RFNGQ9Y644 331 aa11.46□□□□□ -0.57
EDC3-212ENST00000566828 A0A0B4J293 547 aa11.45□□□□□ -0.58
EDC3-212ENST00000566828 TEX48A0A1B0GUV7 120 aa11.45□□□□□ -0.58
EDC3-212ENST00000566828 M0QYG6 137 aa11.45□□□□□ -0.58
EDC3-212ENST00000566828 ATG12O94817 140 aa11.45□□□□□ -0.58
EDC3-212ENST00000566828 PI3P19957 117 aa11.45□□□□□ -0.58
EDC3-212ENST00000566828 ETV6P41212 452 aa11.45□□□□□ -0.58
EDC3-212ENST00000566828 UCP3P55916 312 aa11.45□□□□□ -0.58
EDC3-212ENST00000566828 USF2Q15853 346 aaPredicted RBP11.45□□□□□ -0.58
EDC3-212ENST00000566828 RNASE11Q8TAA1 199 aaKnown RBP11.45□□□□□ -0.58
EDC3-212ENST00000566828 SCPEP1Q9HB40 452 aa11.45□□□□□ -0.58
EDC3-212ENST00000566828 SMIM9A6NGZ8 99 aa11.44□□□□□ -0.58
EDC3-212ENST00000566828 P0C879 139 aa11.44□□□□□ -0.58
EDC3-212ENST00000566828 IGLC1P0CG04 106 aa11.44□□□□□ -0.58
EDC3-212ENST00000566828 AP2S1P53680 142 aaPredicted RBP11.44□□□□□ -0.58
EDC3-212ENST00000566828 TRIM16LQ309B1 348 aa11.44□□□□□ -0.58
EDC3-212ENST00000566828 RNASE12Q5GAN4 147 aaKnown RBP11.44□□□□□ -0.58
EDC3-212ENST00000566828 SIGLEC15Q6ZMC9 328 aa11.44□□□□□ -0.58
EDC3-212ENST00000566828 VCX3AQ9NNX9 186 aa11.44□□□□□ -0.58
EDC3-212ENST00000566828 TRAV30A0A087WSZ9 112 aa11.43□□□□□ -0.58
EDC3-212ENST00000566828 IL4P05112 153 aa11.43□□□□□ -0.58
EDC3-212ENST00000566828 RPL5P46777 297 aaKnown RBP11.43□□□□□ -0.58
EDC3-212ENST00000566828 RND2P52198 227 aa11.43□□□□□ -0.58
EDC3-212ENST00000566828 PIGPP57054 158 aa11.43□□□□□ -0.58
EDC3-212ENST00000566828 Q8N1X5 172 aa11.43□□□□□ -0.58
EDC3-212ENST00000566828 OR1S2Q8NGQ3 325 aa11.43□□□□□ -0.58
EDC3-212ENST00000566828 RRNAD1Q96FB5 475 aaKnown RBP11.43□□□□□ -0.58
EDC3-212ENST00000566828 TP53RKQ96S44 253 aa11.43□□□□□ -0.58
EDC3-212ENST00000566828 TMED3Q9Y3Q3 217 aa11.43□□□□□ -0.58
EDC3-212ENST00000566828 YTHDF2Q9Y5A9 579 aaKnown RBP11.43□□□□□ -0.58
EDC3-212ENST00000566828 A0A0G2JRQ6 117 aa11.42□□□□□ -0.58
EDC3-212ENST00000566828 APOA1P02647 267 aa11.42□□□□□ -0.58
EDC3-212ENST00000566828 OR10J1P30954 320 aa11.42□□□□□ -0.58
EDC3-212ENST00000566828 DHODHQ02127 395 aa11.42□□□□□ -0.58
EDC3-212ENST00000566828 BSXQ3C1V8 233 aa11.42□□□□□ -0.58
EDC3-212ENST00000566828 SP6Q3SY56 376 aa11.42□□□□□ -0.58
EDC3-212ENST00000566828 ZNF709Q8N972 641 aa11.42□□□□□ -0.58
EDC3-212ENST00000566828 Q8WTZ3 238 aa11.42□□□□□ -0.58
EDC3-212ENST00000566828 HERC1Q15751 4861 aa11.42□□□□□ -0.58
EDC3-212ENST00000566828 C3orf85A0A1B0GTC6 90 aa11.41□□□□□ -0.58
EDC3-212ENST00000566828 LOC102723971A0A1B0GUV8 181 aa11.41□□□□□ -0.58
EDC3-212ENST00000566828 RPS10-NUDT3A0A1W2PQS6 291 aa11.41□□□□□ -0.58
EDC3-212ENST00000566828 FAM25AB3EWG3 89 aa11.41□□□□□ -0.58
EDC3-212ENST00000566828 FAM25CB3EWG5 89 aa11.41□□□□□ -0.58
EDC3-212ENST00000566828 FAM25GB3EWG6 89 aa11.41□□□□□ -0.58
EDC3-212ENST00000566828 NKX2-1P43699 371 aaPredicted RBP11.41□□□□□ -0.58
EDC3-212ENST00000566828 RND3P61587 244 aa11.41□□□□□ -0.58
EDC3-212ENST00000566828 OXA1LQ15070 435 aa11.41□□□□□ -0.58
EDC3-212ENST00000566828 RNASE10Q5GAN6 216 aaKnown RBP11.41□□□□□ -0.58
EDC3-212ENST00000566828 PRSS54Q6PEW0 395 aa11.41□□□□□ -0.58
EDC3-212ENST00000566828 YIPF6Q96EC8 236 aa11.41□□□□□ -0.58
EDC3-212ENST00000566828 ZNF486Q96H40 463 aaPredicted RBP11.41□□□□□ -0.58
EDC3-212ENST00000566828 ATG101Q9BSB4 218 aa11.41□□□□□ -0.58
EDC3-212ENST00000566828 SLC35B3Q9H1N7 401 aa11.41□□□□□ -0.58
EDC3-212ENST00000566828 SEPSECSQ9HD40 501 aaKnown RBP11.41□□□□□ -0.58
EDC3-212ENST00000566828 SCRT2Q9NQ03 307 aa11.41□□□□□ -0.58
EDC3-212ENST00000566828 COPZ2Q9P299 210 aa11.41□□□□□ -0.58
EDC3-212ENST00000566828 BUB3O43684 328 aa11.4□□□□□ -0.58
EDC3-212ENST00000566828 HPGDSO60760 199 aa11.4□□□□□ -0.58
EDC3-212ENST00000566828 ELK1P19419 428 aa11.4□□□□□ -0.58
EDC3-212ENST00000566828 YPEL3P61236 119 aaPredicted RBP11.4□□□□□ -0.58
EDC3-212ENST00000566828 DAD1P61803 113 aa11.4□□□□□ -0.58
EDC3-212ENST00000566828 C6orf223Q8N319 242 aa11.4□□□□□ -0.58
EDC3-212ENST00000566828 OR4B1Q8NGF8 309 aa11.4□□□□□ -0.58
EDC3-212ENST00000566828 SAV1Q9H4B6 383 aaPredicted RBP11.4□□□□□ -0.58
EDC3-212ENST00000566828 NBDYA0A0U1RRE5 68 aa11.39□□□□□ -0.59
EDC3-212ENST00000566828 GSTZ1O43708 216 aaPredicted RBP11.39□□□□□ -0.59
EDC3-212ENST00000566828 HBE1P02100 147 aa11.39□□□□□ -0.59
EDC3-212ENST00000566828 FAM3BP58499 235 aaPredicted RBP11.39□□□□□ -0.59
EDC3-212ENST00000566828 GSG1LQ6UXU4 331 aa11.39□□□□□ -0.59
EDC3-212ENST00000566828 CCDC71LQ8N9Z2 235 aa11.39□□□□□ -0.59
EDC3-212ENST00000566828 C15orf53Q8NAA6 179 aa11.39□□□□□ -0.59
EDC3-212ENST00000566828 ZFAND1Q8TCF1 268 aa11.39□□□□□ -0.59
EDC3-212ENST00000566828 LINC00052Q96N35 136 aa11.39□□□□□ -0.59
EDC3-212ENST00000566828 C7orf50Q9BRJ6 194 aaKnown RBP11.39□□□□□ -0.59
EDC3-212ENST00000566828 WDR12Q9GZL7 423 aaKnown RBP11.39□□□□□ -0.59
EDC3-212ENST00000566828 GOLT1BQ9Y3E0 138 aa11.39□□□□□ -0.59
EDC3-212ENST00000566828 SLC25A4P12235 298 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms