RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 Q8WTZ3 238 aa14.41□□□□□ -0.1
CCDC113-204ENST00000566498 ST8SIA2Q92186 375 aa14.41□□□□□ -0.1
CCDC113-204ENST00000566498 NPIPB3Q92617 1050 aa14.41□□□□□ -0.1
CCDC113-204ENST00000566498 METTL26Q96S19 204 aa14.41□□□□□ -0.1
CCDC113-204ENST00000566498 ZFAND3Q9H8U3 227 aa14.41□□□□□ -0.1
CCDC113-204ENST00000566498 PITX3O75364 302 aa14.4□□□□□ -0.1
CCDC113-204ENST00000566498 MED6O75586 246 aa14.4□□□□□ -0.1
CCDC113-204ENST00000566498 IGKV1-17P01599 117 aa14.4□□□□□ -0.1
CCDC113-204ENST00000566498 CD5P06127 495 aa14.4□□□□□ -0.1
CCDC113-204ENST00000566498 ATP5IP56385 69 aaPredicted RBP14.4□□□□□ -0.1
CCDC113-204ENST00000566498 WFDC3Q8IUB2 231 aa14.4□□□□□ -0.1
CCDC113-204ENST00000566498 TMEM231Q9H6L2 316 aa14.4□□□□□ -0.1
CCDC113-204ENST00000566498 RETNQ9HD89 108 aa14.4□□□□□ -0.1
CCDC113-204ENST00000566498 PAIP2BQ9ULR5 123 aaKnown RBP14.4□□□□□ -0.1
CCDC113-204ENST00000566498 NBEAL2Q6ZNJ1 2754 aa14.39□□□□□ -0.11
CCDC113-204ENST00000566498 TENM3Q9P273 2699 aa14.39□□□□□ -0.11
CCDC113-204ENST00000566498 HUWE1Q7Z6Z7 4374 aaKnown RBP14.39□□□□□ -0.11
CCDC113-204ENST00000566498 A0A1W2PS18 150 aa14.39□□□□□ -0.11
CCDC113-204ENST00000566498 DNASE2O00115 360 aaPredicted RBP14.39□□□□□ -0.11
CCDC113-204ENST00000566498 DFFBO76075 338 aa14.39□□□□□ -0.11
CCDC113-204ENST00000566498 OR4E1P0C645 316 aa14.39□□□□□ -0.11
CCDC113-204ENST00000566498 IAPPP10997 89 aa14.39□□□□□ -0.11
CCDC113-204ENST00000566498 C4orf46Q504U0 113 aa14.39□□□□□ -0.11
CCDC113-204ENST00000566498 GGNBP1Q5YKI7 109 aa14.39□□□□□ -0.11
CCDC113-204ENST00000566498 COQ8AQ8NI60 647 aa14.39□□□□□ -0.11
CCDC113-204ENST00000566498 NARS2Q96I59 477 aaKnown RBP14.39□□□□□ -0.11
CCDC113-204ENST00000566498 CITED4Q96RK1 184 aa14.39□□□□□ -0.11
CCDC113-204ENST00000566498 GGTLC1Q9BX51 225 aa14.39□□□□□ -0.11
CCDC113-204ENST00000566498 MAGT1Q9H0U3 335 aa14.39□□□□□ -0.11
CCDC113-204ENST00000566498 FAM90A26D6RGX4 464 aa14.38□□□□□ -0.11
CCDC113-204ENST00000566498 IGLC1P0CG04 106 aa14.38□□□□□ -0.11
CCDC113-204ENST00000566498 ANXA7P20073 488 aaKnown RBP14.38□□□□□ -0.11
CCDC113-204ENST00000566498 CMC4P56277 68 aaPredicted RBP14.38□□□□□ -0.11
CCDC113-204ENST00000566498 RAB11AP62491 216 aa14.38□□□□□ -0.11
CCDC113-204ENST00000566498 DHRS2Q13268 280 aa14.38□□□□□ -0.11
CCDC113-204ENST00000566498 FAM90A2PQ658T7 463 aa14.38□□□□□ -0.11
CCDC113-204ENST00000566498 LILRB2Q8N423 598 aa14.38□□□□□ -0.11
CCDC113-204ENST00000566498 MUC7Q8TAX7 377 aa14.38□□□□□ -0.11
CCDC113-204ENST00000566498 FAM110AQ9BQ89 295 aa14.38□□□□□ -0.11
CCDC113-204ENST00000566498 VSIRQ9H7M9 311 aa14.38□□□□□ -0.11
CCDC113-204ENST00000566498 C3orf84H3BNL1 204 aa14.37□□□□□ -0.11
CCDC113-204ENST00000566498 WRBO00258 174 aa14.37□□□□□ -0.11
CCDC113-204ENST00000566498 IFNA21P01568 189 aa14.37□□□□□ -0.11
CCDC113-204ENST00000566498 RD3LP0DJH9 198 aa14.37□□□□□ -0.11
CCDC113-204ENST00000566498 BTCP35070 178 aa14.37□□□□□ -0.11
CCDC113-204ENST00000566498 GPX4P36969 197 aaPredicted RBP14.37□□□□□ -0.11
CCDC113-204ENST00000566498 YPEL3P61236 119 aaPredicted RBP14.37□□□□□ -0.11
CCDC113-204ENST00000566498 CNPY1Q3B7I2 92 aa14.37□□□□□ -0.11
CCDC113-204ENST00000566498 LYG2Q86SG7 212 aa14.37□□□□□ -0.11
CCDC113-204ENST00000566498 PLA2G10O15496 165 aa14.36□□□□□ -0.11
CCDC113-204ENST00000566498 LYRM1O43325 122 aa14.36□□□□□ -0.11
CCDC113-204ENST00000566498 SYNGR2O43760 224 aa14.36□□□□□ -0.11
CCDC113-204ENST00000566498 ADAP1O75689 374 aa14.36□□□□□ -0.11
CCDC113-204ENST00000566498 CRYBB3P26998 211 aa14.36□□□□□ -0.11
CCDC113-204ENST00000566498 RPP30P78346 268 aaKnown RBP14.36□□□□□ -0.11
CCDC113-204ENST00000566498 ODF3L2Q3SX64 289 aa14.36□□□□□ -0.11
CCDC113-204ENST00000566498 APRG1Q8IVJ8 170 aa14.36□□□□□ -0.11
CCDC113-204ENST00000566498 GRAMD2BQ96HH9 432 aa14.36□□□□□ -0.11
CCDC113-204ENST00000566498 CIB3Q96Q77 187 aaPredicted RBP14.36□□□□□ -0.11
CCDC113-204ENST00000566498 STAB2Q8WWQ8 2551 aa14.36□□□□□ -0.11
CCDC113-204ENST00000566498 LYL1P12980 280 aa14.35□□□□□ -0.11
CCDC113-204ENST00000566498 GAMTQ14353 236 aa14.35□□□□□ -0.11
CCDC113-204ENST00000566498 SLC35E1Q96K37 410 aa14.35□□□□□ -0.11
CCDC113-204ENST00000566498 MS4A6AQ9H2W1 248 aa14.35□□□□□ -0.11
CCDC113-204ENST00000566498 ZFP92A6NM28 416 aa14.34□□□□□ -0.11
CCDC113-204ENST00000566498 IL4P05112 153 aa14.34□□□□□ -0.11
CCDC113-204ENST00000566498 RPL35AP18077 110 aaKnown RBP14.34□□□□□ -0.11
CCDC113-204ENST00000566498 P2RY1P47900 373 aa14.34□□□□□ -0.11
CCDC113-204ENST00000566498 APOC4P55056 127 aa14.34□□□□□ -0.11
CCDC113-204ENST00000566498 RABAC1Q9UI14 185 aa14.34□□□□□ -0.11
CCDC113-204ENST00000566498 MPTX1A8MV57 137 aa14.33□□□□□ -0.12
CCDC113-204ENST00000566498 TOMM40O96008 361 aa14.33□□□□□ -0.12
CCDC113-204ENST00000566498 HNRNPCP07910 306 aaKnown RBP eCLIP14.33□□□□□ -0.12
CCDC113-204ENST00000566498 PSG1P11464 419 aa14.33□□□□□ -0.12
CCDC113-204ENST00000566498 SPANXN5Q5MJ07 72 aa14.33□□□□□ -0.12
CCDC113-204ENST00000566498 CCDC32Q9BV29 185 aa14.33□□□□□ -0.12
CCDC113-204ENST00000566498 EDA2RQ9HAV5 297 aa14.33□□□□□ -0.12
CCDC113-204ENST00000566498 TRAV6A0A075B6T7 132 aa14.32□□□□□ -0.12
CCDC113-204ENST00000566498 TCRBP04435 133 aa14.32□□□□□ -0.12
CCDC113-204ENST00000566498 EIF2B2P49770 351 aaKnown RBP14.32□□□□□ -0.12
CCDC113-204ENST00000566498 ID3Q02535 119 aa14.32□□□□□ -0.12
CCDC113-204ENST00000566498 ZNF124Q15973 351 aa14.32□□□□□ -0.12
CCDC113-204ENST00000566498 LINC00299Q6ZSB3 139 aa14.32□□□□□ -0.12
CCDC113-204ENST00000566498 STPG3Q8N7X2 389 aa14.32□□□□□ -0.12
CCDC113-204ENST00000566498 STXBP6Q8NFX7 210 aa14.32□□□□□ -0.12
CCDC113-204ENST00000566498 S100ZQ8WXG8 99 aa14.32□□□□□ -0.12
CCDC113-204ENST00000566498 C20orf85Q9H1P6 137 aa14.32□□□□□ -0.12
CCDC113-204ENST00000566498 A6NHS1 94 aa14.31□□□□□ -0.12
CCDC113-204ENST00000566498 NKX2-1P43699 371 aaPredicted RBP14.31□□□□□ -0.12
CCDC113-204ENST00000566498 POLR2GP62487 172 aaKnown RBP eCLIP14.31□□□□□ -0.12
CCDC113-204ENST00000566498 USF2Q15853 346 aaPredicted RBP14.31□□□□□ -0.12
CCDC113-204ENST00000566498 OR51G1Q8NGK1 321 aa14.31□□□□□ -0.12
CCDC113-204ENST00000566498 MAP6D1Q9H9H5 199 aa14.31□□□□□ -0.12
CCDC113-204ENST00000566498 GSKIPQ9P0R6 139 aa14.31□□□□□ -0.12
CCDC113-204ENST00000566498 STRAPQ9Y3F4 350 aaKnown RBP14.31□□□□□ -0.12
CCDC113-204ENST00000566498 U3KQE9 123 aa14.31□□□□□ -0.12
CCDC113-204ENST00000566498 H3BP45 60 aa14.3□□□□□ -0.12
CCDC113-204ENST00000566498 UBE2CO00762 179 aa14.3□□□□□ -0.12
CCDC113-204ENST00000566498 FABP1P07148 127 aa14.3□□□□□ -0.12
CCDC113-204ENST00000566498 DEFB131AP59861 70 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms