RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ODF3L2Q3SX64 289 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 C4orf46Q504U0 113 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 TMEM268Q5VZI3 342 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 CLEC19AQ6UXS0 136 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 Q6ZRM9 215 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 TTC9CQ8N5M4 171 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 OR52E5Q8NH55 327 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 COQ8AQ8NI60 647 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 RNASE11Q8TAA1 199 aaKnown RBP6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 SRSF12Q8WXF0 261 aaKnown RBP6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 MARVELD1Q9BSK0 173 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 GPN1Q9HCN4 374 aaPredicted RBP6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 NUDT15Q9NV35 164 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 UFC1Q9Y3C8 167 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 TRAV6A0A075B6T7 132 aa6.56□□□□□ -1.36
VPS9D1-205ENST00000565452 TEX50A0A1B0GTY4 177 aa6.56□□□□□ -1.36
VPS9D1-205ENST00000565452 C15orf61A6NNL5 157 aa6.56□□□□□ -1.36
VPS9D1-205ENST00000565452 INS-IGF2F8WCM5 200 aa6.56□□□□□ -1.36
VPS9D1-205ENST00000565452 IGKV1-5P01602 117 aa6.56□□□□□ -1.36
VPS9D1-205ENST00000565452 SULT1A3P0DMM9 295 aa6.56□□□□□ -1.36
VPS9D1-205ENST00000565452 SULT1A4P0DMN0 295 aa6.56□□□□□ -1.36
VPS9D1-205ENST00000565452 TNP2Q05952 138 aa6.56□□□□□ -1.36
VPS9D1-205ENST00000565452 KLK9Q2XQG4 91 aa6.56□□□□□ -1.36
VPS9D1-205ENST00000565452 AARDQ4LEZ3 155 aa6.56□□□□□ -1.36
VPS9D1-205ENST00000565452 NRARPQ7Z6K4 114 aa6.56□□□□□ -1.36
VPS9D1-205ENST00000565452 APRG1Q8IVJ8 170 aa6.56□□□□□ -1.36
VPS9D1-205ENST00000565452 MITD1Q8WV92 249 aa6.56□□□□□ -1.36
VPS9D1-205ENST00000565452 PDCD10Q9BUL8 212 aa6.56□□□□□ -1.36
VPS9D1-205ENST00000565452 QTRT1Q9BXR0 403 aaKnown RBP6.56□□□□□ -1.36
VPS9D1-205ENST00000565452 NDUFA4L2Q9NRX3 87 aa6.56□□□□□ -1.36
VPS9D1-205ENST00000565452 KLK9Q9UKQ9 250 aa6.56□□□□□ -1.36
VPS9D1-205ENST00000565452 FLVCR2Q9UPI3 526 aa6.56□□□□□ -1.36
VPS9D1-205ENST00000565452 OR51B2Q9Y5P1 312 aa6.56□□□□□ -1.36
VPS9D1-205ENST00000565452 A0A0B4J293 547 aa6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 NPIPB5A8MRT5 1133 aa6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 SNRPGP15A8MWD9 76 aa6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 FAM90A26D6RGX4 464 aa6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 INMT-MINDY4F8WBC2 141 aa6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 CA1P00915 261 aaPredicted RBP6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 CLEC3BP05452 202 aa6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 CRYGCP07315 174 aa6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 HIST1H1BP16401 226 aaKnown RBP6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 ANXA7P20073 488 aaKnown RBP6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 NPY1RP25929 384 aa6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 ATP5IP56385 69 aaPredicted RBP6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 OR2B8PP59922 312 aa6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 SPCS3P61009 180 aa6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 ERHP84090 104 aaKnown RBP6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 SMCO1Q147U7 214 aa6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 RNF212Q495C1 297 aa6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 NMSQ5H8A3 153 aa6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 LYZL2Q7Z4W2 148 aa6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 SLC35G3Q8N808 338 aa6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 Q8NAQ8 132 aa6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 LHFPL5Q8TAF8 219 aa6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 ZNF431Q8TF32 576 aaPredicted RBP6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 GPR146Q96CH1 333 aa6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 THYN1Q9P016 225 aa6.55□□□□□ -1.36
VPS9D1-205ENST00000565452 TRAV3A0A0B4J244 114 aa6.54□□□□□ -1.36
VPS9D1-205ENST00000565452 DBX1A6NMT0 343 aa6.54□□□□□ -1.36
VPS9D1-205ENST00000565452 MED6O75586 246 aa6.54□□□□□ -1.36
VPS9D1-205ENST00000565452 IGHV3-23P01764 117 aa6.54□□□□□ -1.36
VPS9D1-205ENST00000565452 RBMY1CP0DJD4 496 aa6.54□□□□□ -1.36
VPS9D1-205ENST00000565452 MIFP14174 115 aa6.54□□□□□ -1.36
VPS9D1-205ENST00000565452 PSMB6P28072 239 aa6.54□□□□□ -1.36
VPS9D1-205ENST00000565452 SUB1P53999 127 aaKnown RBP eCLIP6.54□□□□□ -1.36
VPS9D1-205ENST00000565452 PRCDQ00LT1 54 aa6.54□□□□□ -1.36
VPS9D1-205ENST00000565452 NOXA1Q86UR1 476 aa6.54□□□□□ -1.36
VPS9D1-205ENST00000565452 C12orf45Q8N5I9 185 aaPredicted RBP6.54□□□□□ -1.36
VPS9D1-205ENST00000565452 EEF1AKMT3Q96AZ1 226 aa6.54□□□□□ -1.36
VPS9D1-205ENST00000565452 C18orf15Q96N68 181 aa6.54□□□□□ -1.36
VPS9D1-205ENST00000565452 FYTTD1Q96QD9 318 aaKnown RBP6.54□□□□□ -1.36
VPS9D1-205ENST00000565452 TRBV7-1A0A0A6YYK4 115 aa6.53□□□□□ -1.36
VPS9D1-205ENST00000565452 IGHV4-28A0A0C4DH34 117 aa6.53□□□□□ -1.36
VPS9D1-205ENST00000565452 TEX22C9J3V5 150 aa6.53□□□□□ -1.36
VPS9D1-205ENST00000565452 E7EUB6 86 aa6.53□□□□□ -1.36
VPS9D1-205ENST00000565452 J3QL48 77 aa6.53□□□□□ -1.36
VPS9D1-205ENST00000565452 ST8SIA3O43173 380 aa6.53□□□□□ -1.36
VPS9D1-205ENST00000565452 PITX3O75364 302 aa6.53□□□□□ -1.36
VPS9D1-205ENST00000565452 DEFA4P12838 97 aa6.53□□□□□ -1.36
VPS9D1-205ENST00000565452 RGS21Q2M5E4 152 aa6.53□□□□□ -1.36
VPS9D1-205ENST00000565452 UNQ9165/PRO28630Q6UXU0 137 aa6.53□□□□□ -1.36
VPS9D1-205ENST00000565452 SPATA12Q7Z6I5 190 aa6.53□□□□□ -1.36
VPS9D1-205ENST00000565452 ZNF114Q8NC26 417 aa6.53□□□□□ -1.36
VPS9D1-205ENST00000565452 ATP6V0BQ99437 205 aa6.53□□□□□ -1.36
VPS9D1-205ENST00000565452 CHRDL1Q9BU40 450 aa6.53□□□□□ -1.36
VPS9D1-205ENST00000565452 ENY2Q9NPA8 101 aa6.53□□□□□ -1.36
VPS9D1-205ENST00000565452 CACNG5Q9UF02 275 aa6.53□□□□□ -1.36
VPS9D1-205ENST00000565452 NSG2Q9Y328 171 aa6.53□□□□□ -1.36
VPS9D1-205ENST00000565452 A0A0G2JRQ6 117 aa6.52□□□□□ -1.37
VPS9D1-205ENST00000565452 IGLC7A0M8Q6 106 aa6.52□□□□□ -1.37
VPS9D1-205ENST00000565452 HMX3A6NHT5 357 aa6.52□□□□□ -1.37
VPS9D1-205ENST00000565452 CGB1A6NKQ9 187 aa6.52□□□□□ -1.37
VPS9D1-205ENST00000565452 HOXB5P09067 269 aa6.52□□□□□ -1.37
VPS9D1-205ENST00000565452 OR13C7P0DN81 318 aa6.52□□□□□ -1.37
VPS9D1-205ENST00000565452 SNCAP37840 140 aa6.52□□□□□ -1.37
VPS9D1-205ENST00000565452 CYCSP99999 105 aaKnown RBP6.52□□□□□ -1.37
VPS9D1-205ENST00000565452 ID3Q02535 119 aa6.52□□□□□ -1.37
VPS9D1-205ENST00000565452 C12orf74Q32Q52 190 aa6.52□□□□□ -1.37
VPS9D1-205ENST00000565452 GGNBP1Q5YKI7 109 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms