RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 RARRES2Q99969 163 aa14.21□□□□□ -0.13
COMMD4-208ENST00000563220 SEC14L6B5MCN3 397 aa14.21□□□□□ -0.14
COMMD4-208ENST00000563220 K7EIM0 57 aa14.21□□□□□ -0.14
COMMD4-208ENST00000563220 CRYBA1P05813 215 aa14.21□□□□□ -0.14
COMMD4-208ENST00000563220 CYP2G1PQ6ZSU1 146 aa14.21□□□□□ -0.14
COMMD4-208ENST00000563220 OR1L6Q8NGR2 347 aa14.21□□□□□ -0.14
COMMD4-208ENST00000563220 CDC34P49427 236 aaPredicted RBP14.2□□□□□ -0.14
COMMD4-208ENST00000563220 ZNF90Q03938 601 aa14.2□□□□□ -0.14
COMMD4-208ENST00000563220 RHEBQ15382 184 aa14.2□□□□□ -0.14
COMMD4-208ENST00000563220 RNF212Q495C1 297 aa14.2□□□□□ -0.14
COMMD4-208ENST00000563220 AWAT1Q58HT5 328 aa14.2□□□□□ -0.14
COMMD4-208ENST00000563220 BIN3Q9NQY0 253 aa14.2□□□□□ -0.14
COMMD4-208ENST00000563220 IGLV11-55A0A075B6I3 123 aa14.19□□□□□ -0.14
COMMD4-208ENST00000563220 C7orf77A4D0Y5 90 aa14.19□□□□□ -0.14
COMMD4-208ENST00000563220 ZFP92A6NM28 416 aa14.19□□□□□ -0.14
COMMD4-208ENST00000563220 GSX1Q9H4S2 264 aaPredicted RBP14.19□□□□□ -0.14
COMMD4-208ENST00000563220 HECTD1Q9ULT8 2610 aa14.19□□□□□ -0.14
COMMD4-208ENST00000563220 TCRBV4S1A1TA0A5B7 111 aa14.18□□□□□ -0.14
COMMD4-208ENST00000563220 RBFOX3A6NFN3 312 aa14.18□□□□□ -0.14
COMMD4-208ENST00000563220 HAGHQ16775 308 aa14.18□□□□□ -0.14
COMMD4-208ENST00000563220 UNQ5815/PRO19632Q6UWF5 114 aa14.18□□□□□ -0.14
COMMD4-208ENST00000563220 LINC00518Q8N0U6 118 aa14.18□□□□□ -0.14
COMMD4-208ENST00000563220 TMPRSS5Q9H3S3 457 aa14.18□□□□□ -0.14
COMMD4-208ENST00000563220 SEPSECSQ9HD40 501 aaKnown RBP14.18□□□□□ -0.14
COMMD4-208ENST00000563220 RPS10P5Q9NQ39 176 aa14.18□□□□□ -0.14
COMMD4-208ENST00000563220 ITPR3Q14573 2671 aa14.18□□□□□ -0.14
COMMD4-208ENST00000563220 A0A1W2PPV4 95 aa14.18□□□□□ -0.14
COMMD4-208ENST00000563220 MT-ND4LP03901 98 aa14.18□□□□□ -0.14
COMMD4-208ENST00000563220 ECSCRQ19T08 205 aa14.18□□□□□ -0.14
COMMD4-208ENST00000563220 SPATA31B1PQ5VZV4 182 aa14.18□□□□□ -0.14
COMMD4-208ENST00000563220 TMUB1Q9BVT8 246 aa14.18□□□□□ -0.14
COMMD4-208ENST00000563220 SAV1Q9H4B6 383 aaPredicted RBP14.18□□□□□ -0.14
COMMD4-208ENST00000563220 TNFRSF19Q9NS68 423 aa14.18□□□□□ -0.14
COMMD4-208ENST00000563220 GNG13Q9P2W3 67 aa14.18□□□□□ -0.14
COMMD4-208ENST00000563220 TEX15Q9BXT5 2789 aa14.17□□□□□ -0.14
COMMD4-208ENST00000563220 G3V318 75 aa14.17□□□□□ -0.14
COMMD4-208ENST00000563220 IGHV4-59P01825 116 aa14.17□□□□□ -0.14
COMMD4-208ENST00000563220 C9orf139Q6ZV77 190 aa14.17□□□□□ -0.14
COMMD4-208ENST00000563220 OR4X1Q8NH49 305 aa14.17□□□□□ -0.14
COMMD4-208ENST00000563220 TRGV9Q99603 122 aa14.17□□□□□ -0.14
COMMD4-208ENST00000563220 PITPNC1Q9UKF7 332 aa14.17□□□□□ -0.14
COMMD4-208ENST00000563220 FAM110DQ8TAY7 271 aaPredicted RBP14.16□□□□□ -0.14
COMMD4-208ENST00000563220 HIST1H2BAQ96A08 127 aa14.16□□□□□ -0.14
COMMD4-208ENST00000563220 NDUFB8O95169 186 aa14.16□□□□□ -0.14
COMMD4-208ENST00000563220 IER3P46695 156 aa14.16□□□□□ -0.14
COMMD4-208ENST00000563220 BLCAPP62952 87 aa14.16□□□□□ -0.14
COMMD4-208ENST00000563220 ICAM4Q14773 271 aa14.16□□□□□ -0.14
COMMD4-208ENST00000563220 AKIRIN2Q53H80 203 aa14.16□□□□□ -0.14
COMMD4-208ENST00000563220 SOHLH1Q5JUK2 328 aa14.16□□□□□ -0.14
COMMD4-208ENST00000563220 ZNF506Q5JVG8 444 aa14.16□□□□□ -0.14
COMMD4-208ENST00000563220 TMEM37Q8WXS4 190 aa14.16□□□□□ -0.14
COMMD4-208ENST00000563220 ZNF48Q96MX3 618 aaPredicted RBP14.16□□□□□ -0.14
COMMD4-208ENST00000563220 S4R3C0 116 aa14.16□□□□□ -0.14
COMMD4-208ENST00000563220 PSMB11A5LHX3 300 aa14.15□□□□□ -0.14
COMMD4-208ENST00000563220 M0R036 132 aa14.15□□□□□ -0.14
COMMD4-208ENST00000563220 OR2J3O76001 311 aa14.15□□□□□ -0.14
COMMD4-208ENST00000563220 HSPB1P04792 205 aaKnown RBP14.15□□□□□ -0.14
COMMD4-208ENST00000563220 IGLC1P0CG04 106 aa14.15□□□□□ -0.14
COMMD4-208ENST00000563220 RAB5BP61020 215 aa14.15□□□□□ -0.14
COMMD4-208ENST00000563220 C9orf152Q5JTZ5 239 aa14.15□□□□□ -0.14
COMMD4-208ENST00000563220 AKAP9Q99996 3911 aa14.15□□□□□ -0.14
COMMD4-208ENST00000563220 LOC102723971A0A1B0GUV8 181 aa14.14□□□□□ -0.15
COMMD4-208ENST00000563220 CLN5O75503 358 aa14.14□□□□□ -0.15
COMMD4-208ENST00000563220 STAG3L2P0CL84 134 aa14.14□□□□□ -0.15
COMMD4-208ENST00000563220 STAG3L3P0CL85 134 aa14.14□□□□□ -0.15
COMMD4-208ENST00000563220 SELENOTP62341 195 aa14.14□□□□□ -0.15
COMMD4-208ENST00000563220 RHOBP62745 196 aa14.14□□□□□ -0.15
COMMD4-208ENST00000563220 FAM78BQ5VT40 261 aa14.14□□□□□ -0.15
COMMD4-208ENST00000563220 Q6ZS46 218 aa14.14□□□□□ -0.15
COMMD4-208ENST00000563220 TMEM68Q96MH6 324 aa14.14□□□□□ -0.15
COMMD4-208ENST00000563220 LINC00527Q9UJ94 153 aa14.14□□□□□ -0.15
COMMD4-208ENST00000563220 M0QZK8 103 aa14.14□□□□□ -0.15
COMMD4-208ENST00000563220 SRP19P09132 144 aaKnown RBP14.14□□□□□ -0.15
COMMD4-208ENST00000563220 PMS2P11Q13670 270 aa14.14□□□□□ -0.15
COMMD4-208ENST00000563220 KLK9Q2XQG4 91 aa14.14□□□□□ -0.15
COMMD4-208ENST00000563220 MIR17HGQ75NE6 70 aa14.14□□□□□ -0.15
COMMD4-208ENST00000563220 GATAD1Q8WUU5 269 aa14.14□□□□□ -0.15
COMMD4-208ENST00000563220 KLK9Q9UKQ9 250 aa14.14□□□□□ -0.15
COMMD4-208ENST00000563220 OR5G3P0C626 314 aa14.13□□□□□ -0.15
COMMD4-208ENST00000563220 BCL2P10415 239 aa14.13□□□□□ -0.15
COMMD4-208ENST00000563220 CRIP2P52943 208 aaPredicted RBP14.13□□□□□ -0.15
COMMD4-208ENST00000563220 KHDC3LQ587J8 217 aa14.13□□□□□ -0.15
COMMD4-208ENST00000563220 C19orf54Q5BKX5 351 aa14.13□□□□□ -0.15
COMMD4-208ENST00000563220 PATE2Q6UY27 113 aa14.13□□□□□ -0.15
COMMD4-208ENST00000563220 Q6YL49 198 aa14.13□□□□□ -0.15
COMMD4-208ENST00000563220 C16orf82Q7Z2V1 217 aa14.13□□□□□ -0.15
COMMD4-208ENST00000563220 SLC35E3Q7Z769 313 aa14.13□□□□□ -0.15
COMMD4-208ENST00000563220 DNAJC4Q9NNZ3 241 aa14.13□□□□□ -0.15
COMMD4-208ENST00000563220 THYN1Q9P016 225 aa14.13□□□□□ -0.15
COMMD4-208ENST00000563220 DOK5Q9P104 306 aa14.13□□□□□ -0.15
COMMD4-208ENST00000563220 FUT9Q9Y231 359 aa14.13□□□□□ -0.15
COMMD4-208ENST00000563220 C1orf196B1AJZ1 125 aa14.12□□□□□ -0.15
COMMD4-208ENST00000563220 F8W735 103 aaPredicted RBP14.12□□□□□ -0.15
COMMD4-208ENST00000563220 IGKV1-17P01599 117 aa14.12□□□□□ -0.15
COMMD4-208ENST00000563220 IGHG2P01859 326 aa14.12□□□□□ -0.15
COMMD4-208ENST00000563220 KRTAP1-1Q07627 177 aa14.12□□□□□ -0.15
COMMD4-208ENST00000563220 TIGITQ495A1 244 aa14.12□□□□□ -0.15
COMMD4-208ENST00000563220 IQCF2Q8IXL9 164 aa14.12□□□□□ -0.15
COMMD4-208ENST00000563220 FBXL7Q9UJT9 491 aa14.12□□□□□ -0.15
COMMD4-208ENST00000563220 ARL14EPLP0DKL9 152 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms