RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 ENKURQ8TC29 256 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 SEC22CQ9BRL7 303 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 MARVELD1Q9BSK0 173 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 ZNF256Q9Y2P7 627 aaPredicted RBP4.69□□□□□ -1.66
CNOT1-204ENST00000563130 IGHV3-35A0A0C4DH35 117 aa4.68□□□□□ -1.66
CNOT1-204ENST00000563130 C15orf62A8K5M9 175 aa4.68□□□□□ -1.66
CNOT1-204ENST00000563130 NUPL2O15504 423 aaKnown RBP4.68□□□□□ -1.66
CNOT1-204ENST00000563130 GNG7O60262 68 aa4.68□□□□□ -1.66
CNOT1-204ENST00000563130 CLN5O75503 358 aa4.68□□□□□ -1.66
CNOT1-204ENST00000563130 MED6O75586 246 aa4.68□□□□□ -1.66
CNOT1-204ENST00000563130 TMEM50AO95807 157 aa4.68□□□□□ -1.66
CNOT1-204ENST00000563130 IFNA21P01568 189 aa4.68□□□□□ -1.66
CNOT1-204ENST00000563130 FOLR2P14207 255 aa4.68□□□□□ -1.66
CNOT1-204ENST00000563130 SPNP16150 400 aa4.68□□□□□ -1.66
CNOT1-204ENST00000563130 OPRK1P41145 380 aa4.68□□□□□ -1.66
CNOT1-204ENST00000563130 DEFA1P59665 94 aa4.68□□□□□ -1.66
CNOT1-204ENST00000563130 DEFA3P59666 94 aa4.68□□□□□ -1.66
CNOT1-204ENST00000563130 PRSS54Q6PEW0 395 aa4.68□□□□□ -1.66
CNOT1-204ENST00000563130 NOXA1Q86UR1 476 aa4.68□□□□□ -1.66
CNOT1-204ENST00000563130 HAPLN4Q86UW8 402 aa4.68□□□□□ -1.66
CNOT1-204ENST00000563130 C12orf45Q8N5I9 185 aaPredicted RBP4.68□□□□□ -1.66
CNOT1-204ENST00000563130 UBAC2Q8NBM4 344 aa4.68□□□□□ -1.66
CNOT1-204ENST00000563130 CIB3Q96Q77 187 aaPredicted RBP4.68□□□□□ -1.66
CNOT1-204ENST00000563130 LSM4Q9Y4Z0 139 aaKnown RBP4.68□□□□□ -1.66
CNOT1-204ENST00000563130 SORL1Q92673 2214 aa4.68□□□□□ -1.66
CNOT1-204ENST00000563130 RPS10-NUDT3A0A1W2PQS6 291 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 ZNF320A2RRD8 509 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 PRSS46E5RG02 174 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 K7EMT4 169 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 LY86O95711 162 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 IFNA10P01566 189 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 IGKV1-17P01599 117 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 SLC25A4P12235 298 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 NKX2-1P43699 371 aaPredicted RBP4.67□□□□□ -1.66
CNOT1-204ENST00000563130 RELQ04864 619 aaPredicted RBP4.67□□□□□ -1.66
CNOT1-204ENST00000563130 CD69Q07108 199 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 IL15RAQ13261 267 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 DEFB114Q30KQ6 69 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 OR2K2Q8NGT1 345 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 MARC2Q969Z3 335 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 MAGT1Q9H0U3 335 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 PALMDQ9NP74 551 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 DAZ1Q9NQZ3 744 aaKnown RBP4.67□□□□□ -1.66
CNOT1-204ENST00000563130 MRPL27Q9P0M9 148 aaKnown RBP4.67□□□□□ -1.66
CNOT1-204ENST00000563130 UFC1Q9Y3C8 167 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 SNRPGP15A8MWD9 76 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 INMT-MINDY4F8WBC2 141 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 PRAF2O60831 178 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 IGLC1P0CG04 106 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 IAPPP10997 89 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 GP9P14770 177 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 PAX9P55771 341 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 POLR2GP62487 172 aaKnown RBP eCLIP4.67□□□□□ -1.66
CNOT1-204ENST00000563130 IAH1Q2TAA2 248 aaPredicted RBP4.67□□□□□ -1.66
CNOT1-204ENST00000563130 ETFRF1Q6IPR1 90 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 WDR73Q6P4I2 378 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 ZBTB8BQ8NAP8 495 aaPredicted RBP4.67□□□□□ -1.66
CNOT1-204ENST00000563130 UXS1Q8NBZ7 420 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 MRAPQ8TCY5 172 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 CACNG8Q8WXS5 425 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 PRR25Q96S07 402 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 TECRQ9NZ01 308 aaKnown RBP4.67□□□□□ -1.66
CNOT1-204ENST00000563130 MLXQ9UH92 298 aa4.67□□□□□ -1.66
CNOT1-204ENST00000563130 TRAV30A0A087WSZ9 112 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 IZUMO1RA6ND01 250 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 ZNF785A8K8V0 405 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 PMS2P5A8MQ11 134 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 WRBO00258 174 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 CCSO14618 274 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 GPX4P36969 197 aaPredicted RBP4.66□□□□□ -1.66
CNOT1-204ENST00000563130 RND2P52198 227 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 CD300EQ496F6 205 aaPredicted RBP4.66□□□□□ -1.66
CNOT1-204ENST00000563130 TOMM20LQ6UXN7 152 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 ZNF600Q6ZNG1 722 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 Q8N1Y9 231 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 SMIM8Q96KF7 97 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 CDIP1Q9H305 208 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 RCL1Q9Y2P8 373 aaKnown RBP4.66□□□□□ -1.66
CNOT1-204ENST00000563130 IGHV3OR16-8A0A075B7F1 116 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 FAM25EA8MYX2 175 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 MBPP02686 304 aaPredicted RBP4.66□□□□□ -1.66
CNOT1-204ENST00000563130 IFNA4P05014 189 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 YPEL3P61236 119 aaPredicted RBP4.66□□□□□ -1.66
CNOT1-204ENST00000563130 RAB11AP62491 216 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 GAMTQ14353 236 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 LCN12Q6JVE5 192 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 SLC16A13Q7RTY0 426 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 TMEM61Q8N0U2 210 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 NPIPB3Q92617 1050 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 C16orf92Q96LL3 132 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 C2orf50Q96LR7 162 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 C11orf1Q9H5F2 150 aa4.66□□□□□ -1.66
CNOT1-204ENST00000563130 GPN1Q9HCN4 374 aaPredicted RBP4.66□□□□□ -1.66
CNOT1-204ENST00000563130 PUS1Q9Y606 427 aaKnown RBP eCLIP4.66□□□□□ -1.66
CNOT1-204ENST00000563130 IGKV1D-37A0A075B6S9 117 aa4.65□□□□□ -1.66
CNOT1-204ENST00000563130 C7orf66A4D0T2 115 aa4.65□□□□□ -1.66
CNOT1-204ENST00000563130 SCAF4O95104 1147 aaKnown RBP4.65□□□□□ -1.66
CNOT1-204ENST00000563130 PTTG1O95997 202 aa4.65□□□□□ -1.66
CNOT1-204ENST00000563130 TAS2R30P59541 319 aa4.65□□□□□ -1.66
CNOT1-204ENST00000563130 RPP30P78346 268 aaKnown RBP4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms