RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 SRSF12Q8WXF0 261 aaKnown RBP3.45□□□□□ -1.86
SMG1-206ENST00000562668 ARPC1AQ92747 370 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 ZNF414Q96IQ9 312 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 PARP11Q9NR21 331 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 NDUFA4L2Q9NRX3 87 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 TMEM14BQ9NUH8 114 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 MCUBQ9NWR8 336 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 COPZ2Q9P299 210 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 WSB1Q9Y6I7 421 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 PKD1L1Q8TDX9 2849 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 TRBV9A0A0B4J1U6 114 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 C9orf170A2RU37 121 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 MSGN1A6NI15 193 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 C15orf61A6NNL5 157 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 INS-IGF2F8WCM5 200 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 PITX3O75364 302 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 SFT2D2O95562 160 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 TCRBP04435 133 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 AREGP15514 252 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 RPA2P15927 270 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 SPNP16150 400 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 AKR1C4P17516 323 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 CTRB1P17538 263 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 MAS1LP35410 378 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 RPL27AP46776 148 aaKnown RBP3.44□□□□□ -1.86
SMG1-206ENST00000562668 MFAP2P55001 183 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 UBE2MP61081 183 aaKnown RBP3.44□□□□□ -1.86
SMG1-206ENST00000562668 RPL23AP62750 156 aaKnown RBP3.44□□□□□ -1.86
SMG1-206ENST00000562668 RPL8P62917 257 aaKnown RBP3.44□□□□□ -1.86
SMG1-206ENST00000562668 WT1-ASQ06250 92 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 CBX3Q13185 183 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 TNXAQ16473 311 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 ECSCRQ19T08 205 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 PDLIM3Q53GG5 364 aaPredicted RBP3.44□□□□□ -1.86
SMG1-206ENST00000562668 TMEM128Q5BJH2 165 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 NMSQ5H8A3 153 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 PVRIGQ6DKI7 326 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 CTRB2Q6GPI1 263 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 LYZL2Q7Z4W2 148 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 NRARPQ7Z6K4 114 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 CENPVQ7Z7K6 275 aaPredicted RBP3.44□□□□□ -1.86
SMG1-206ENST00000562668 ZNF429Q86V71 674 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 NDUFA11Q86Y39 141 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 SLC35G3Q8N808 338 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 C3orf56Q8N813 242 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 ZNF491Q8N8L2 437 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 CCDC71LQ8N9Z2 235 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 DUSP18Q8NEJ0 188 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 OR10W1Q8NGF6 305 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 VSTM2AQ8TAG5 236 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 CASTOR1Q8WTX7 329 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 IL22RA2Q969J5 263 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 LSM10Q969L4 123 aaKnown RBP3.44□□□□□ -1.86
SMG1-206ENST00000562668 GPR146Q96CH1 333 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 SCGB3A2Q96PL1 93 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 ALX4Q9H161 411 aaPredicted RBP3.44□□□□□ -1.86
SMG1-206ENST00000562668 C20orf85Q9H1P6 137 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 HRH4Q9H3N8 390 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 GNB4Q9HAV0 340 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 C14orf166Q9Y224 244 aaKnown RBP3.44□□□□□ -1.86
SMG1-206ENST00000562668 FOXA2Q9Y261 457 aaPredicted RBP3.44□□□□□ -1.86
SMG1-206ENST00000562668 NSG2Q9Y328 171 aa3.44□□□□□ -1.86
SMG1-206ENST00000562668 IGLV11-55A0A075B6I3 123 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 A0A0B4J2A0 478 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 H3BUA1 57 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 I3L521 148 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 OPN1MWP04001 364 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 SERPINE2P07093 398 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 OR4E1P0C645 316 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 APELAP0DMC3 54 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 OPN1MW2P0DN77 364 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 OPN1MW3P0DN78 364 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 VPREB1P12018 145 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 VDAC1P21796 283 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 PSMB6P28072 239 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 CDX1P47902 265 aaPredicted RBP3.43□□□□□ -1.86
SMG1-206ENST00000562668 RAB9AP51151 201 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 MFAP4P55083 255 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 HSPE1P61604 102 aaKnown RBP3.43□□□□□ -1.86
SMG1-206ENST00000562668 PRCDQ00LT1 54 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 RUNX1Q01196 453 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 DEFA5Q01523 94 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 DHRS2Q13268 280 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 PLGLAQ15195 96 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 BSXQ3C1V8 233 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 TEX38Q6PEX7 206 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 UNQ5815/PRO19632Q6UWF5 114 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 TMED4Q7Z7H5 227 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 SGPP2Q8IWX5 399 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 CENPSQ8N2Z9 138 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 COMMD1Q8N668 190 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 POC5Q8NA72 575 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 OR5T1Q8NG75 326 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 OR52B4Q8NGK2 314 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 OR5M8Q8NGP6 311 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 GRPEL2Q8TAA5 225 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 MITD1Q8WV92 249 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 RBPMSQ93062 196 aaKnown RBP3.43□□□□□ -1.86
SMG1-206ENST00000562668 SAT2Q96F10 170 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms