RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 ARMC1Q9NVT9 282 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 MED9Q9NWA0 146 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 EPDR1Q9UM22 224 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 SOX21Q9Y651 276 aaPredicted RBP0.59□□□□□ -2.31
CHD9-204ENST00000561869 AHNAK2Q8IVF2 5795 aa0.59□□□□□ -2.32
CHD9-204ENST00000561869 PLXND1Q9Y4D7 1925 aa0.59□□□□□ -2.32
CHD9-204ENST00000561869 MED12LQ86YW9 2145 aa0.59□□□□□ -2.32
CHD9-204ENST00000561869 ALPK2Q86TB3 2170 aa0.59□□□□□ -2.32
CHD9-204ENST00000561869 SBF1O95248 1867 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 FMN1Q68DA7 1419 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 KMT2BQ9UMN6 2715 aaPredicted RBP0.58□□□□□ -2.32
CHD9-204ENST00000561869 IGKV1D-42A0A075B6H8 117 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 A0A087X0T9 212 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 C7orf71A4D174 169 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 TMEM212A6NML5 194 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 OR5F1O95221 314 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 OR4E1P0C645 316 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 BAALC-AS2P0C853 105 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 SPI1P17947 270 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 S100A4P26447 101 aaKnown RBP0.58□□□□□ -2.32
CHD9-204ENST00000561869 SRIP30626 198 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 RNASE4P34096 147 aaKnown RBP0.58□□□□□ -2.32
CHD9-204ENST00000561869 PDE6HQ13956 83 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 TSNQ15631 228 aaKnown RBP0.58□□□□□ -2.32
CHD9-204ENST00000561869 KHDC3LQ587J8 217 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 KRTAP5-10Q6L8G5 202 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 DPPA3Q6W0C5 159 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 GOLT1AQ6ZVE7 132 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 RPS19BP1Q86WX3 136 aaKnown RBP0.58□□□□□ -2.32
CHD9-204ENST00000561869 WFDC11Q8NEX6 87 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 OR4E2Q8NGC2 313 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 OR13D1Q8NGV5 346 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 SLC25A40Q8TBP6 338 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 WFDC5Q8TCV5 224 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 DNAJC9Q8WXX5 260 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 DGCR14Q96DF8 476 aaKnown RBP0.58□□□□□ -2.32
CHD9-204ENST00000561869 GINS4Q9BRT9 223 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 OSTCQ9NRP0 149 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 TAS2R4Q9NYW5 299 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 HS3ST2Q9Y278 367 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 MICAL3Q7RTP6 2002 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 CCDC88AQ3V6T2 1871 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 HEATR5BQ9P2D3 2071 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 COL6A6A6NMZ7 2263 aa0.58□□□□□ -2.32
CHD9-204ENST00000561869 PCDH15Q96QU1 1955 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 FLG2Q5D862 2391 aaPredicted RBP0.57□□□□□ -2.32
CHD9-204ENST00000561869 KIF1BO60333 1816 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 C2orf70A6NJV1 201 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 HCRTO43612 131 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 ASAH2BP0C7U1 165 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 UBBP0CG47 229 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 SMIM17P0DL12 118 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 LYNX1P0DP58 116 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 ERP29P30040 261 aaKnown RBP0.57□□□□□ -2.32
CHD9-204ENST00000561869 ATP5G3P48201 142 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 PIGPP57054 158 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 TAF1AQ15573 450 aaPredicted RBP0.57□□□□□ -2.32
CHD9-204ENST00000561869 RRN3P1Q2M238 152 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 PHF13Q86YI8 300 aaPredicted RBP0.57□□□□□ -2.32
CHD9-204ENST00000561869 C3orf56Q8N813 242 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 C12orf29Q8N999 325 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 OR8D4Q8NGM9 314 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 OR10J5Q8NHC4 309 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 AQP3Q92482 292 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 SLAMF6Q96DU3 332 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 HIST1H2BLQ99880 126 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 SLC50A1Q9BRV3 221 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 C9orf16Q9BUW7 83 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 ENY2Q9NPA8 101 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 NHP2Q9NX24 153 aaKnown RBP0.57□□□□□ -2.32
CHD9-204ENST00000561869 IL20Q9NYY1 176 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 OPTCQ9UBM4 332 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 FAM32AQ9Y421 112 aaKnown RBP0.57□□□□□ -2.32
CHD9-204ENST00000561869 ARFGEF3Q5TH69 2177 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 SCN10AQ9Y5Y9 1956 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 ECM29Q5VYK3 1845 aa0.57□□□□□ -2.32
CHD9-204ENST00000561869 CACNA1BQ00975 2339 aa0.56□□□□□ -2.32
CHD9-204ENST00000561869 AHNAKQ09666 5890 aaKnown RBP0.56□□□□□ -2.32
CHD9-204ENST00000561869 MACF1Q9UPN3 7388 aaKnown RBP0.56□□□□□ -2.32
CHD9-204ENST00000561869 ARHGEF28Q8N1W1 1705 aaKnown RBP0.56□□□□□ -2.32
CHD9-204ENST00000561869 TRAV1-1A0A0B4J248 108 aa0.56□□□□□ -2.32
CHD9-204ENST00000561869 IGKV3D-7A0A0C4DH55 119 aa0.56□□□□□ -2.32
CHD9-204ENST00000561869 IGKV3OR2-268A0A0C4DH90 116 aa0.56□□□□□ -2.32
CHD9-204ENST00000561869 IGKV2-29A2NJV5 120 aaPredicted RBP0.56□□□□□ -2.32
CHD9-204ENST00000561869 CYB5BO43169 146 aa0.56□□□□□ -2.32
CHD9-204ENST00000561869 OR1I1O60431 355 aa0.56□□□□□ -2.32
CHD9-204ENST00000561869 ANGP03950 147 aaKnown RBP0.56□□□□□ -2.32
CHD9-204ENST00000561869 SERPINB9P50453 376 aa0.56□□□□□ -2.32
CHD9-204ENST00000561869 RHOGP84095 191 aa0.56□□□□□ -2.32
CHD9-204ENST00000561869 LYRM7Q5U5X0 104 aa0.56□□□□□ -2.32
CHD9-204ENST00000561869 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.56□□□□□ -2.32
CHD9-204ENST00000561869 S100A7AQ86SG5 101 aa0.56□□□□□ -2.32
CHD9-204ENST00000561869 LYG2Q86SG7 212 aa0.56□□□□□ -2.32
CHD9-204ENST00000561869 LINC00311Q8N616 119 aa0.56□□□□□ -2.32
CHD9-204ENST00000561869 OR4C6Q8NH72 309 aa0.56□□□□□ -2.32
CHD9-204ENST00000561869 FAM172AQ8WUF8 416 aa0.56□□□□□ -2.32
CHD9-204ENST00000561869 REG4Q9BYZ8 158 aa0.56□□□□□ -2.32
CHD9-204ENST00000561869 IMUPQ9GZP8 106 aa0.56□□□□□ -2.32
CHD9-204ENST00000561869 TMEM126AQ9H061 195 aa0.56□□□□□ -2.32
CHD9-204ENST00000561869 OR5AC2Q9NZP5 309 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms