RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 TSKUQ8WUA8 353 aa8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 CHD5Q8TDI0 1954 aa8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 IGHV1-69-2A0A0G2JMI3 117 aa8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 UMODP07911 640 aa8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 PAPPA-AS1Q5QFB9 102 aa8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 SAP25Q8TEE9 199 aa8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 CACNG8Q8WXS5 425 aa8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 VCX2Q9H322 139 aa8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 SNRNP200O75643 2136 aaKnown RBP8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 A0A1B0GUS0 222 aa8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 UPK2O00526 184 aa8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 TREML4Q6UXN2 200 aa8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 COL5A3P25940 1745 aaPredicted RBP8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 NDUFA2O43678 99 aa8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 KIR3DL3Q8N743 410 aa8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 FBXL7Q9UJT9 491 aa8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 WDR83OSQ9Y284 106 aa8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 MRPS16Q9Y3D3 137 aaKnown RBP8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 LOC105371242A0A075B767 164 aa8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 TRAV2A0A0B4J234 112 aa8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 TRAV8-4A0A0B4J246 113 aa8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 IGKV1D-33P01593 117 aa8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 IGKV1-33P01594 117 aa8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 MST1LQ2TV78 715 aa8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 FAM166AQ6J272 317 aa8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 RAB9AP51151 201 aa8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 SRSF4Q08170 494 aaKnown RBP8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 GUSBP1Q15486 140 aa8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 TMEM30BQ3MIR4 351 aa8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 FAM106AQ4KMX7 169 aa8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 IFI27L1Q96BM0 104 aa8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 RAX2Q96IS3 184 aa8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 A8MWP6 167 aa8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 Q6ZT83 130 aa8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 ITLN2Q8WWU7 325 aaPredicted RBP8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 PPP1R32Q7Z5V6 425 aa8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 GP6Q9HCN6 339 aa8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 POLR3KQ9Y2Y1 108 aaPredicted RBP8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 AKAP6Q13023 2319 aa8.49□□□□□ -1.05
GTF3C1-202ENST00000561623 TRAV1-1A0A0B4J248 108 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 FGFBP3Q8TAT2 258 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 VGLL1Q99990 258 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 TNFRSF18Q9Y5U5 241 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 NCR2O95944 276 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 CD69Q07108 199 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 ZNF581Q9P0T4 197 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 CABIN1Q9Y6J0 2220 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 IGHV3-64A0A075B6Q5 118 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 IGKV1-27A0A075B6S5 117 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 PAX2Q02962 417 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 OR10W1Q8NGF6 305 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 MESP1Q9BRJ9 268 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 SBF2Q86WG5 1849 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 ESDP10768 282 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 CCL3L1P16619 93 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 PRTN3P24158 256 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 MORN2Q502X0 79 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 GLMPQ8WWB7 406 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 SEPSECSQ9HD40 501 aaKnown RBP8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 C21orf62Q9NYP8 219 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 PSG8Q9UQ74 426 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 CHTOPQ9Y3Y2 248 aaKnown RBP8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 C5orf63A6NC05 138 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 BCL6BQ8N143 479 aaPredicted RBP8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 GGTLC1Q9BX51 225 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 MTCL1Q9Y4B5 1905 aaKnown RBP8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 E9PQ18 207 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 LINC00271P0C7V0 271 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 CLEC19AQ6UXS0 136 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 DEFB104AQ8WTQ1 72 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 EDA2RQ9HAV5 297 aa8.48□□□□□ -1.05
GTF3C1-202ENST00000561623 A8MWV9 139 aa8.47□□□□□ -1.05
GTF3C1-202ENST00000561623 ERVK11-1P61568 191 aa8.47□□□□□ -1.05
GTF3C1-202ENST00000561623 SNHG12Q9BXW3 62 aa8.47□□□□□ -1.05
GTF3C1-202ENST00000561623 MS4A6AQ9H2W1 248 aa8.47□□□□□ -1.05
GTF3C1-202ENST00000561623 TRGV3P03979 118 aa8.47□□□□□ -1.05
GTF3C1-202ENST00000561623 C3orf36Q3SXR2 165 aa8.47□□□□□ -1.05
GTF3C1-202ENST00000561623 WNK3Q9BYP7 1800 aa8.47□□□□□ -1.05
GTF3C1-202ENST00000561623 HEATR5BQ9P2D3 2071 aa8.47□□□□□ -1.05
GTF3C1-202ENST00000561623 VDAC2P45880 294 aaPredicted RBP8.47□□□□□ -1.05
GTF3C1-202ENST00000561623 ZNF138P52744 262 aa8.47□□□□□ -1.05
GTF3C1-202ENST00000561623 TOMM7Q9P0U1 55 aa8.47□□□□□ -1.05
GTF3C1-202ENST00000561623 TCF20Q9UGU0 1960 aaKnown RBP8.47□□□□□ -1.05
GTF3C1-202ENST00000561623 PARP14Q460N5 1801 aa8.47□□□□□ -1.05
GTF3C1-202ENST00000561623 PRB1P04280 392 aa8.47□□□□□ -1.05
GTF3C1-202ENST00000561623 MGST2Q99735 147 aa8.47□□□□□ -1.05
GTF3C1-202ENST00000561623 AGMATQ9BSE5 352 aa8.47□□□□□ -1.05
GTF3C1-202ENST00000561623 IGHV1-2P23083 117 aa8.47□□□□□ -1.05
GTF3C1-202ENST00000561623 KLHDC3Q9BQ90 382 aa8.47□□□□□ -1.05
GTF3C1-202ENST00000561623 DOCK3Q8IZD9 2030 aa8.47□□□□□ -1.05
GTF3C1-202ENST00000561623 DOCK4Q8N1I0 1966 aa8.47□□□□□ -1.05
GTF3C1-202ENST00000561623 IGHV2OR16-5A0A0B4J2B6 119 aa8.46□□□□□ -1.05
GTF3C1-202ENST00000561623 GAGE12BA1L429 117 aa8.46□□□□□ -1.05
GTF3C1-202ENST00000561623 IGHV2-70P01814 119 aa8.46□□□□□ -1.05
GTF3C1-202ENST00000561623 NPSP0C0P6 89 aa8.46□□□□□ -1.05
GTF3C1-202ENST00000561623 DUTP33316 252 aaKnown RBP8.46□□□□□ -1.05
GTF3C1-202ENST00000561623 CD300EQ496F6 205 aaPredicted RBP8.46□□□□□ -1.05
GTF3C1-202ENST00000561623 GBF1Q92538 1859 aa8.46□□□□□ -1.05
GTF3C1-202ENST00000561623 A0A1W2PR77 199 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms