RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 C7orf71A4D174 169 aa0.33□□□□□ -2.36
USP8-218ENST00000561330 OR4C46A6NHA9 309 aa0.33□□□□□ -2.36
USP8-218ENST00000561330 PRH1P02810 166 aa0.33□□□□□ -2.36
USP8-218ENST00000561330 OR4E1P0C645 316 aa0.33□□□□□ -2.36
USP8-218ENST00000561330 SMIM10L2AP0DMW4 78 aa0.33□□□□□ -2.36
USP8-218ENST00000561330 SMIM10L2BP0DMW5 78 aa0.33□□□□□ -2.36
USP8-218ENST00000561330 SULT1A1P50225 295 aa0.33□□□□□ -2.36
USP8-218ENST00000561330 ESRGQ1W209 222 aa0.33□□□□□ -2.36
USP8-218ENST00000561330 LINC01554Q52M75 96 aa0.33□□□□□ -2.36
USP8-218ENST00000561330 C6orf62Q9GZU0 229 aaPredicted RBP0.33□□□□□ -2.36
USP8-218ENST00000561330 MRPL27Q9P0M9 148 aaKnown RBP0.33□□□□□ -2.36
USP8-218ENST00000561330 ZFC3H1O60293 1989 aaKnown RBP0.33□□□□□ -2.36
USP8-218ENST00000561330 KIF13BQ9NQT8 1826 aa0.33□□□□□ -2.36
USP8-218ENST00000561330 MYO3BQ8WXR4 1341 aa0.33□□□□□ -2.36
USP8-218ENST00000561330 MED12Q93074 2177 aa0.32□□□□□ -2.36
USP8-218ENST00000561330 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.32□□□□□ -2.36
USP8-218ENST00000561330 PIRO00625 290 aa0.32□□□□□ -2.36
USP8-218ENST00000561330 IFNA5P01569 189 aa0.32□□□□□ -2.36
USP8-218ENST00000561330 COTL1Q14019 142 aa0.32□□□□□ -2.36
USP8-218ENST00000561330 LCA10Q71F78 164 aa0.32□□□□□ -2.36
USP8-218ENST00000561330 KRT222Q8N1A0 295 aa0.32□□□□□ -2.36
USP8-218ENST00000561330 DCUN1D1Q96GG9 259 aa0.32□□□□□ -2.36
USP8-218ENST00000561330 CCDC90BQ9GZT6 254 aa0.32□□□□□ -2.36
USP8-218ENST00000561330 TMEM14CQ9P0S9 112 aa0.32□□□□□ -2.36
USP8-218ENST00000561330 CYSLTR1Q9Y271 337 aa0.32□□□□□ -2.36
USP8-218ENST00000561330 SNAPC4Q5SXM2 1469 aa0.32□□□□□ -2.36
USP8-218ENST00000561330 NEO1Q92859 1461 aa0.32□□□□□ -2.36
USP8-218ENST00000561330 TNRC6AQ8NDV7 1962 aaKnown RBP0.32□□□□□ -2.36
USP8-218ENST00000561330 TRAV26-2A0A0B4J265 109 aa0.31□□□□□ -2.36
USP8-218ENST00000561330 CHP2O43745 196 aa0.31□□□□□ -2.36
USP8-218ENST00000561330 RBP1P09455 135 aa0.31□□□□□ -2.36
USP8-218ENST00000561330 NKX2-5P52952 324 aaPredicted RBP0.31□□□□□ -2.36
USP8-218ENST00000561330 LINC00322Q6ZN03 302 aaPredicted RBP0.31□□□□□ -2.36
USP8-218ENST00000561330 SMR3AQ99954 134 aa0.31□□□□□ -2.36
USP8-218ENST00000561330 C14orf132Q9NPU4 83 aa0.31□□□□□ -2.36
USP8-218ENST00000561330 SYNE2Q8WXH0 6885 aaKnown RBP0.31□□□□□ -2.36
USP8-218ENST00000561330 E9PCH4 1651 aa0.3□□□□□ -2.36
USP8-218ENST00000561330 A0A087X0T9 212 aa0.3□□□□□ -2.36
USP8-218ENST00000561330 TRBV6-4A0A1B0GX49 114 aa0.3□□□□□ -2.36
USP8-218ENST00000561330 CASP1P29466 404 aa0.3□□□□□ -2.36
USP8-218ENST00000561330 TSNQ15631 228 aaKnown RBP0.3□□□□□ -2.36
USP8-218ENST00000561330 VPS29Q9UBQ0 182 aa0.3□□□□□ -2.36
USP8-218ENST00000561330 UTP11Q9Y3A2 253 aaKnown RBP0.3□□□□□ -2.36
USP8-218ENST00000561330 OR2T8A6NH00 312 aa0.29□□□□□ -2.36
USP8-218ENST00000561330 M0R036 132 aa0.29□□□□□ -2.36
USP8-218ENST00000561330 CCL16O15467 120 aa0.29□□□□□ -2.36
USP8-218ENST00000561330 HIST1H2BLQ99880 126 aa0.29□□□□□ -2.36
USP8-218ENST00000561330 TLNRD1Q9H1K6 362 aa0.29□□□□□ -2.36
USP8-218ENST00000561330 SNRNP200O75643 2136 aaKnown RBP0.29□□□□□ -2.36
USP8-218ENST00000561330 AHSA1O95433 338 aa0.28□□□□□ -2.36
USP8-218ENST00000561330 TTRP02766 147 aa0.28□□□□□ -2.36
USP8-218ENST00000561330 IFNA16P05015 189 aa0.28□□□□□ -2.36
USP8-218ENST00000561330 ANP32AP39687 249 aaKnown RBP0.28□□□□□ -2.36
USP8-218ENST00000561330 OR2T10Q8NGZ9 312 aa0.28□□□□□ -2.36
USP8-218ENST00000561330 DDI1Q8WTU0 396 aa0.28□□□□□ -2.36
USP8-218ENST00000561330 C8orf76Q96K31 380 aa0.28□□□□□ -2.36
USP8-218ENST00000561330 BCL2L10Q9HD36 194 aa0.28□□□□□ -2.36
USP8-218ENST00000561330 NIT2Q9NQR4 276 aa0.28□□□□□ -2.36
USP8-218ENST00000561330 UBAP1Q9NZ09 502 aa0.28□□□□□ -2.36
USP8-218ENST00000561330 ROBO3Q96MS0 1386 aa0.28□□□□□ -2.36
USP8-218ENST00000561330 CEP192Q8TEP8 1941 aa0.27□□□□□ -2.37
USP8-218ENST00000561330 MCM3APO60318 1980 aa0.27□□□□□ -2.37
USP8-218ENST00000561330 ST6GALNAC3Q8NDV1 305 aa0.27□□□□□ -2.37
USP8-218ENST00000561330 PLPP5Q8NEB5 264 aa0.27□□□□□ -2.37
USP8-218ENST00000561330 OR8D4Q8NGM9 314 aa0.27□□□□□ -2.37
USP8-218ENST00000561330 TMEM254Q8TBM7 123 aa0.27□□□□□ -2.37
USP8-218ENST00000561330 HECW2Q9P2P5 1572 aa0.27□□□□□ -2.37
USP8-218ENST00000561330 FSIP2Q5CZC0 6907 aa0.27□□□□□ -2.37
USP8-218ENST00000561330 FAM236DA0A1B0GTK5 79 aa0.26□□□□□ -2.37
USP8-218ENST00000561330 TLCD2A6NGC4 264 aa0.26□□□□□ -2.37
USP8-218ENST00000561330 CLDN24A6NM45 220 aa0.26□□□□□ -2.37
USP8-218ENST00000561330 C1orf196B1AJZ1 125 aa0.26□□□□□ -2.37
USP8-218ENST00000561330 KLF7O75840 302 aaPredicted RBP0.26□□□□□ -2.37
USP8-218ENST00000561330 ZNF682O95780 498 aa0.26□□□□□ -2.37
USP8-218ENST00000561330 DHFRP00374 187 aa0.26□□□□□ -2.37
USP8-218ENST00000561330 SERPINA6P08185 405 aa0.26□□□□□ -2.37
USP8-218ENST00000561330 FAM236CP0DP71 79 aa0.26□□□□□ -2.37
USP8-218ENST00000561330 RHOBP62745 196 aa0.26□□□□□ -2.37
USP8-218ENST00000561330 CLDN22Q8N7P3 220 aa0.26□□□□□ -2.37
USP8-218ENST00000561330 WFDC5Q8TCV5 224 aa0.26□□□□□ -2.37
USP8-218ENST00000561330 C2orf50Q96LR7 162 aa0.26□□□□□ -2.37
USP8-218ENST00000561330 CMSS1Q9BQ75 279 aaKnown RBP0.26□□□□□ -2.37
USP8-218ENST00000561330 ZNF462Q96JM2 2506 aa0.26□□□□□ -2.37
USP8-218ENST00000561330 APCP25054 2843 aa0.25□□□□□ -2.37
USP8-218ENST00000561330 NAV3Q8IVL0 2385 aa0.25□□□□□ -2.37
USP8-218ENST00000561330 HECW1Q76N89 1606 aa0.25□□□□□ -2.37
USP8-218ENST00000561330 MED1Q15648 1581 aaPredicted RBP0.25□□□□□ -2.37
USP8-218ENST00000561330 NUPR1O60356 82 aa0.25□□□□□ -2.37
USP8-218ENST00000561330 CT55Q8WUE5 264 aa0.25□□□□□ -2.37
USP8-218ENST00000561330 ADAT3Q96EY9 351 aaPredicted RBP0.25□□□□□ -2.37
USP8-218ENST00000561330 C14orf105Q9NVL8 296 aa0.25□□□□□ -2.37
USP8-218ENST00000561330 CHCHD2Q9Y6H1 151 aaPredicted RBP0.25□□□□□ -2.37
USP8-218ENST00000561330 FRAS1Q86XX4 4008 aa0.25□□□□□ -2.37
USP8-218ENST00000561330 MACF1Q9UPN3 7388 aaKnown RBP0.24□□□□□ -2.37
USP8-218ENST00000561330 IGHV1-58A0A0C4DH39 117 aa0.24□□□□□ -2.37
USP8-218ENST00000561330 TCRBV4S1A1TA0A5B7 111 aa0.24□□□□□ -2.37
USP8-218ENST00000561330 GADD45GO95257 159 aa0.24□□□□□ -2.37
USP8-218ENST00000561330 CNIH1O95406 144 aa0.24□□□□□ -2.37
USP8-218ENST00000561330 LINC00575Q6W349 94 aa0.24□□□□□ -2.37
USP8-218ENST00000561330 OR6V1Q8N148 313 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms