RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 SAA2-SAA4A0A096LPE2 208 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 IGHV3-72A0A0B4J1Y9 119 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 CTXND1A0A1B0GTU2 59 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 TCRBV4S1A1TA0A5B7 111 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 FNDC10F2Z333 226 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 IGLV2-14P01704 120 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 HLA-DRB1P01911 266 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 PF4P02776 101 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 TYMSP04818 313 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 SAA2P0DJI9 122 aaPredicted RBP5.38□□□□□ -1.55
SPG11-224ENST00000561268 PF4V1P10720 104 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 CD33P20138 364 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 PSMB8P28062 276 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 S100A2P29034 98 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 PPIFP30405 207 aaKnown RBP5.38□□□□□ -1.55
SPG11-224ENST00000561268 REG1BP48304 166 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 PSMB3P49720 205 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 FAM3BP58499 235 aaPredicted RBP5.38□□□□□ -1.55
SPG11-224ENST00000561268 RPP30P78346 268 aaKnown RBP5.38□□□□□ -1.55
SPG11-224ENST00000561268 TNFRSF9Q07011 255 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 FOXE3Q13461 319 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 EIF4EBP1Q13541 118 aaPredicted RBP5.38□□□□□ -1.55
SPG11-224ENST00000561268 HES1Q14469 280 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 FAM90A2PQ658T7 463 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 MRPL41Q8IXM3 137 aaKnown RBP5.38□□□□□ -1.55
SPG11-224ENST00000561268 CYB561D1Q8N8Q1 229 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 OR52E5Q8NH55 327 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 GPR146Q96CH1 333 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 BSCL2Q96G97 398 aaPredicted RBP5.38□□□□□ -1.55
SPG11-224ENST00000561268 ACY3Q96HD9 319 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 S1PR3Q99500 378 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 NABP2Q9BQ15 211 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 HSPB9Q9BQS6 159 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 SRD5A3Q9H8P0 318 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 GSN-AS1Q9NRJ2 163 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 CCL28Q9NRJ3 127 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.38□□□□□ -1.55
SPG11-224ENST00000561268 GNG12Q9UBI6 72 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 TRAPPC2LQ9UL33 140 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 A0A1W2PRX2 142 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 LINC01548A6NM66 108 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 C17orf112F2Z3M2 114 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 K7EIL1 84 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 RAB29O14966 203 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 PPP1R2P9O14990 202 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 KBTBD11O94819 623 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 ELANEP08246 267 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 OR13C7P0DN81 318 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 IGLL1P15814 213 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 HIST1H1BP16401 226 aaKnown RBP5.37□□□□□ -1.55
SPG11-224ENST00000561268 FHITP49789 147 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 SLC35B1P78383 322 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 NDPQ00604 133 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 RUNX1Q01196 453 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 MEF2BQ02080 365 aaPredicted RBP5.37□□□□□ -1.55
SPG11-224ENST00000561268 KIAA0141Q14154 515 aaPredicted RBP5.37□□□□□ -1.55
SPG11-224ENST00000561268 ACOT6Q3I5F7 207 aaPredicted RBP5.37□□□□□ -1.55
SPG11-224ENST00000561268 ZNF585BQ52M93 769 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 ANKRD39Q53RE8 183 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 SLC25A24Q6NUK1 477 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 C18orf65Q6ZTR6 163 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 ZNF329Q86UD4 541 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 NPBQ8NG41 125 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 OR51H1Q8NH63 302 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 C2CD4CQ8TF44 421 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 TMEM190Q8WZ59 177 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 GALMQ96C23 342 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 FAM210BQ96KR6 192 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 TMEM147Q9BVK8 224 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 MRPL20Q9BYC9 149 aaKnown RBP5.37□□□□□ -1.55
SPG11-224ENST00000561268 GPR61Q9BZJ8 451 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 RPRMQ9NS64 109 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 PSENENQ9NZ42 101 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 DOK5Q9P104 306 aa5.37□□□□□ -1.55
SPG11-224ENST00000561268 PUS1Q9Y606 427 aaKnown RBP eCLIP5.37□□□□□ -1.55
SPG11-224ENST00000561268 IGHV7-81A0A0B4J1V7 117 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 PRSS47A8MTI9 375 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 PHOX2AO14813 284 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 CYB5BO43169 146 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 PDE6DO43924 150 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 HIST1H2BKO60814 126 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 PROP1O75360 226 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 CLN5O75503 358 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 CST7O76096 145 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 IGKV1-39P01597 117 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 IGLV1-40P01703 118 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 PRB2P02812 416 aaPredicted RBP5.36□□□□□ -1.55
SPG11-224ENST00000561268 IGKV1D-39P04432 117 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 HIST1H2BJP06899 126 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 HIST1H2BOP23527 126 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 HIST1H2BBP33778 126 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 CEACAM6P40199 344 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 MYCNOSP40205 109 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 KIR2DS2P43631 304 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 RPS10P46783 165 aaKnown RBP5.36□□□□□ -1.55
SPG11-224ENST00000561268 HIST1H2BDP58876 126 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 KRTAP10-11P60412 298 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 HIST1H2BCP62807 126 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 HIST2H2BEQ16778 126 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 C5orf64Q2M2E5 130 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms