RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 C14orf166Q9Y224 244 aaKnown RBP4.57□□□□□ -1.68
LRRC28-220ENST00000561253 FOXA2Q9Y261 457 aaPredicted RBP4.57□□□□□ -1.68
LRRC28-220ENST00000561253 TET2Q6N021 2002 aaPredicted RBP4.56□□□□□ -1.68
LRRC28-220ENST00000561253 TRBV9A0A0B4J1U6 114 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 TRAV41A0A0B4J266 112 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 A0A0B4J2A0 478 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 TEX50A0A1B0GTY4 177 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 C9orf170A2RU37 121 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 PSMB11A5LHX3 300 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 CENPXA8MT69 81 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 INS-IGF2F8WCM5 200 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 PITX3O75364 302 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 SERPINE2P07093 398 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 CRYGCP07315 174 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 OR4E1P0C645 316 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 CFC1BP0CG36 223 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 CFC1P0CG37 223 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 AREGP15514 252 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 SPNP16150 400 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 AKR1C4P17516 323 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 CTRB1P17538 263 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 HLA-GP17693 338 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 S100GP29377 79 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 MAS1LP35410 378 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 WT1-ASQ06250 92 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 CBX3Q13185 183 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 DHRS2Q13268 280 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 PVRIGQ6DKI7 326 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 CTRB2Q6GPI1 263 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 C19orf35Q6ZS72 473 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 Q6ZTC4 211 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 LYZL2Q7Z4W2 148 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 TMED4Q7Z7H5 227 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 SGPP2Q8IWX5 399 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 CENPSQ8N2Z9 138 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 SLC35G3Q8N808 338 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 NHLRC2Q8NBF2 726 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 LFNGQ8NES3 379 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 OR5AU1Q8NGC0 362 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 LSM10Q969L4 123 aaKnown RBP4.56□□□□□ -1.68
LRRC28-220ENST00000561253 GPR146Q96CH1 333 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 MARVELD1Q9BSK0 173 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 PALMDQ9NP74 551 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 NUDT15Q9NV35 164 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 SHPKQ9UHJ6 478 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 NSG2Q9Y328 171 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 WSB1Q9Y6I7 421 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 DNAH9Q9NYC9 4486 aa4.56□□□□□ -1.68
LRRC28-220ENST00000561253 DUXBA0A1W2PPF3 345 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 MSGN1A6NI15 193 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 SNURFLB1AK76 121 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 CCL24O00175 119 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 DUS4LO95620 317 aaKnown RBP4.55□□□□□ -1.68
LRRC28-220ENST00000561253 IL5P05113 134 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 VDAC1P21796 283 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 RPL27AP46776 148 aaKnown RBP4.55□□□□□ -1.68
LRRC28-220ENST00000561253 INPP1P49441 399 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 MFAP2P55001 183 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 SRPXP78539 464 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 PLGLAQ15195 96 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 TNXAQ16473 311 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 ECSCRQ19T08 205 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 TRIM16LQ309B1 348 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 BSXQ3C1V8 233 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 BTNL8Q6UX41 500 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 C12orf54Q6X4T0 127 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 LYG2Q86SG7 212 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 TTC9CQ8N5M4 171 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 COMMD1Q8N668 190 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 OR10W1Q8NGF6 305 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 OR52B4Q8NGK2 314 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 OR5B3Q8NH48 314 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 GRPEL2Q8TAA5 225 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 MITD1Q8WV92 249 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 ZNF414Q96IQ9 312 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 TSC22D3Q99576 134 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 COA4Q9NYJ1 87 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 ZNF257Q9Y2Q1 563 aa4.55□□□□□ -1.68
LRRC28-220ENST00000561253 IGLV11-55A0A075B6I3 123 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 TRAV6A0A075B6T7 132 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 FAM240BA0A1B0GVZ2 78 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 C7orf66A4D0T2 115 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 MPTX1A8MV57 137 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 H3BUA1 57 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 I3L521 148 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 ST8SIA3O43173 380 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 CREBL2O60519 120 aaPredicted RBP4.54□□□□□ -1.68
LRRC28-220ENST00000561253 HLA-AP01891 365 aaKnown RBP4.54□□□□□ -1.68
LRRC28-220ENST00000561253 APELAP0DMC3 54 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 SLC25A6P12236 298 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 PSMB6P28072 239 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 RAB9AP51151 201 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 ERVK-16P61578 105 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 HSPE1P61604 102 aaKnown RBP4.54□□□□□ -1.68
LRRC28-220ENST00000561253 RPL23AP62750 156 aaKnown RBP4.54□□□□□ -1.68
LRRC28-220ENST00000561253 PRCDQ00LT1 54 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 RUNX1Q01196 453 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 IL15RAQ13261 267 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 UNQ5815/PRO19632Q6UWF5 114 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 H2BFWTQ7Z2G1 175 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms