RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 SLC25A24Q6NUK1 477 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 ZNF343Q6P1L6 599 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 C10orf99Q6UWK7 81 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 TMEM144Q7Z5S9 345 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 CENPVQ7Z7K6 275 aaPredicted RBP4.23□□□□□ -1.73
ZEB1-220ENST00000560909 ZNF329Q86UD4 541 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 KLHDC1Q8N7A1 406 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.23□□□□□ -1.73
ZEB1-220ENST00000560909 ZNF491Q8N8L2 437 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 THAP8Q8NA92 274 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 OR10P1Q8NGE3 313 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 OR4X1Q8NH49 305 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 ZNF502Q8TBZ5 544 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 ABHD5Q8WTS1 349 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 SCARB1Q8WTV0 552 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 DCUN1D4Q92564 292 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 TAF15Q92804 592 aaKnown RBP eCLIP4.23□□□□□ -1.73
ZEB1-220ENST00000560909 PINX1Q96BK5 328 aaKnown RBP4.23□□□□□ -1.73
ZEB1-220ENST00000560909 BSCL2Q96G97 398 aaPredicted RBP4.23□□□□□ -1.73
ZEB1-220ENST00000560909 UBE2E2Q96LR5 201 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 MFFQ9GZY8 342 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 ARV1Q9H2C2 271 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 WFDC1Q9HC57 220 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 CYTL1Q9NRR1 136 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 THYN1Q9P016 225 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 MRPL36Q9P0J6 103 aaKnown RBP4.23□□□□□ -1.73
ZEB1-220ENST00000560909 FBXL7Q9UJT9 491 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 WNK1Q9H4A3 2382 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 TRRAPQ9Y4A5 3859 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 IGKV1D-37A0A075B6S9 117 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 IGKV1OR2-108A0A075B7D4 117 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 FXYD6-FXYD2A0A087WZ82 144 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 TRBV7-1A0A0A6YYK4 115 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 A0A0D9SG52 128 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 RPS10-NUDT3A0A1W2PQS6 291 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 H3BP45 60 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 I3L521 148 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 TAAR5O14804 337 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 PFDN1O60925 122 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 CLN5O75503 358 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 CST7O76096 145 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 MT-CO2P00403 227 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 IGKV1-17P01599 117 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 PRH1P02810 166 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 IFNA4P05014 189 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 CTSGP08311 255 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 OR8U8P0C7N1 319 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 APELAP0DMC3 54 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 DEFA4P12838 97 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 CAV2P51636 162 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 KRTAP10-3P60369 221 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 KRTAP10-11P60412 298 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 HBG1P69891 147 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 HBG2P69892 147 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 SRSF2Q01130 221 aaKnown RBP4.22□□□□□ -1.73
ZEB1-220ENST00000560909 C15orf32Q32M92 178 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 ZFP69Q49AA0 526 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 ETFRF1Q6IPR1 90 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 SLC16A13Q7RTY0 426 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 STX12Q86Y82 276 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 C9orf62Q8N4C0 152 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 INO80EQ8NBZ0 244 aaPredicted RBP4.22□□□□□ -1.73
ZEB1-220ENST00000560909 OR5AU1Q8NGC0 362 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 CXorf58Q96LI9 332 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 CCDC140Q96MF4 163 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 CITED1Q99966 193 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 TMEM147Q9BVK8 224 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 GAR1Q9NY12 217 aaKnown RBP4.22□□□□□ -1.73
ZEB1-220ENST00000560909 WDR83OSQ9Y284 106 aa4.22□□□□□ -1.73
ZEB1-220ENST00000560909 MFSD2BA6NFX1 497 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 ARPC5O15511 151 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 MPDU1O75352 247 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 OR2J3O76001 311 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 DFFBO76075 338 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 TRGV3P03979 118 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 LGALS1P09382 135 aaKnown RBP4.21□□□□□ -1.74
ZEB1-220ENST00000560909 IGLC1P0CG04 106 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 PF4V1P10720 104 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 NUP62P37198 522 aaPredicted RBP4.21□□□□□ -1.74
ZEB1-220ENST00000560909 NPBWR1P48145 328 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 MFAP4P55083 255 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 PLP1P60201 277 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 YPEL3P61236 119 aaPredicted RBP4.21□□□□□ -1.74
ZEB1-220ENST00000560909 ATP5G2Q06055 141 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 SLC38A11Q08AI6 406 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 FHL3Q13643 280 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 KRTAP21-3Q3LHN1 58 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 AWAT1Q58HT5 328 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 SPSB3Q6PJ21 355 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 TMUB2Q71RG4 321 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 UBAC2Q8NBM4 344 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 OR4X2Q8NGF9 303 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 OR1S2Q8NGQ3 325 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 OR5C1Q8NGR4 320 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 STOML3Q8TAV4 291 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 TMEM158Q8WZ71 300 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 TRGV9Q99603 122 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 ATP5SQ99766 215 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 NPVFQ9HCQ7 196 aa4.21□□□□□ -1.74
ZEB1-220ENST00000560909 UQCC1Q9NVA1 299 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms