RNA–Protein interactions for RNA: ENST00000560885.5

USP8-213, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-213ENST00000560885 ZNF2Q9BSG1 426 aaPredicted RBP4.57□□□□□ -1.68
USP8-213ENST00000560885 AUNIPQ9H7T9 357 aa4.57□□□□□ -1.68
USP8-213ENST00000560885 SEPSECSQ9HD40 501 aaKnown RBP4.57□□□□□ -1.68
USP8-213ENST00000560885 DIABLOQ9NR28 239 aa4.57□□□□□ -1.68
USP8-213ENST00000560885 TXNL4BQ9NX01 149 aaKnown RBP4.57□□□□□ -1.68
USP8-213ENST00000560885 EHFQ9NZC4 300 aa4.57□□□□□ -1.68
USP8-213ENST00000560885 XCL2Q9UBD3 114 aa4.57□□□□□ -1.68
USP8-213ENST00000560885 RRP15Q9Y3B9 282 aaKnown RBP4.57□□□□□ -1.68
USP8-213ENST00000560885 APOBP04114 4563 aaKnown RBP4.56□□□□□ -1.68
USP8-213ENST00000560885 INS-IGF2F8WCM5 200 aa4.56□□□□□ -1.68
USP8-213ENST00000560885 H3BMM0 161 aa4.56□□□□□ -1.68
USP8-213ENST00000560885 RGS13O14921 159 aa4.56□□□□□ -1.68
USP8-213ENST00000560885 CLN5O75503 358 aa4.56□□□□□ -1.68
USP8-213ENST00000560885 FCER2P06734 321 aa4.56□□□□□ -1.68
USP8-213ENST00000560885 S100GP29377 79 aa4.56□□□□□ -1.68
USP8-213ENST00000560885 HOXA1P49639 335 aaPredicted RBP4.56□□□□□ -1.68
USP8-213ENST00000560885 PPP5CP53041 499 aa4.56□□□□□ -1.68
USP8-213ENST00000560885 SUB1P53999 127 aaKnown RBP eCLIP4.56□□□□□ -1.68
USP8-213ENST00000560885 C4orf46Q504U0 113 aa4.56□□□□□ -1.68
USP8-213ENST00000560885 PSMG4Q5JS54 123 aa4.56□□□□□ -1.68
USP8-213ENST00000560885 LPCAT3Q6P1A2 487 aa4.56□□□□□ -1.68
USP8-213ENST00000560885 OR6F1Q8NGZ6 308 aa4.56□□□□□ -1.68
USP8-213ENST00000560885 OR4X1Q8NH49 305 aa4.56□□□□□ -1.68
USP8-213ENST00000560885 TMEM230Q96A57 120 aa4.56□□□□□ -1.68
USP8-213ENST00000560885 NIPSNAP3BQ9BS92 247 aa4.56□□□□□ -1.68
USP8-213ENST00000560885 IFT46Q9NQC8 304 aa4.56□□□□□ -1.68
USP8-213ENST00000560885 DKK2Q9UBU2 259 aa4.56□□□□□ -1.68
USP8-213ENST00000560885 BLOC1S6Q9UL45 172 aa4.56□□□□□ -1.68
USP8-213ENST00000560885 RFNGQ9Y644 331 aa4.56□□□□□ -1.68
USP8-213ENST00000560885 DMBT1Q9UGM3 2413 aaPredicted RBP4.56□□□□□ -1.68
USP8-213ENST00000560885 TRAV30A0A087WSZ9 112 aa4.55□□□□□ -1.68
USP8-213ENST00000560885 MEIS3P1A6NDR6 274 aa4.55□□□□□ -1.68
USP8-213ENST00000560885 FAM90A26D6RGX4 464 aa4.55□□□□□ -1.68
USP8-213ENST00000560885 IGKV1-39P01597 117 aa4.55□□□□□ -1.68
USP8-213ENST00000560885 IGKV1D-39P04432 117 aa4.55□□□□□ -1.68
USP8-213ENST00000560885 RPL5P46777 297 aaKnown RBP4.55□□□□□ -1.68
USP8-213ENST00000560885 EMP1P54849 157 aa4.55□□□□□ -1.68
USP8-213ENST00000560885 AQP4P55087 323 aa4.55□□□□□ -1.68
USP8-213ENST00000560885 TAS2R46P59540 309 aa4.55□□□□□ -1.68
USP8-213ENST00000560885 FAM222AQ5U5X8 452 aa4.55□□□□□ -1.68
USP8-213ENST00000560885 C16orf54Q6UWD8 224 aa4.55□□□□□ -1.68
USP8-213ENST00000560885 C6orf223Q8N319 242 aa4.55□□□□□ -1.68
USP8-213ENST00000560885 C15orf53Q8NAA6 179 aa4.55□□□□□ -1.68
USP8-213ENST00000560885 OR5H6Q8NGV6 325 aa4.55□□□□□ -1.68
USP8-213ENST00000560885 GLMPQ8WWB7 406 aa4.55□□□□□ -1.68
USP8-213ENST00000560885 NRN1Q9NPD7 142 aa4.55□□□□□ -1.68
USP8-213ENST00000560885 SCRT2Q9NQ03 307 aa4.55□□□□□ -1.68
USP8-213ENST00000560885 SSR3Q9UNL2 185 aa4.55□□□□□ -1.68
USP8-213ENST00000560885 TMED3Q9Y3Q3 217 aa4.55□□□□□ -1.68
USP8-213ENST00000560885 NBDYA0A0U1RRE5 68 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 TMEM127O75204 238 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 IGKV1-17P01599 117 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 PMP2P02689 132 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 HNRNPCP07910 306 aaKnown RBP eCLIP4.54□□□□□ -1.68
USP8-213ENST00000560885 RNASE2P10153 161 aaKnown RBP4.54□□□□□ -1.68
USP8-213ENST00000560885 HLA-DRB4P13762 266 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 HTN3P15516 51 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 NAT1P18440 290 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 SDC2P34741 201 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 OPRK1P41145 380 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 NKX2-1P43699 371 aaPredicted RBP4.54□□□□□ -1.68
USP8-213ENST00000560885 ALDH3B2P48448 385 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 PHLDA2Q53GA4 152 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 IDNKQ5T6J7 187 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 TMEM88Q6PEY1 159 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 TBC1D26Q86UD7 250 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 SLC35G3Q8N808 338 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 OR5H2Q8NGV7 314 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 Q8WTZ3 238 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 MRGPRFQ96AM1 343 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 S100A16Q96FQ6 103 aaKnown RBP4.54□□□□□ -1.68
USP8-213ENST00000560885 C8orf49Q96NF6 230 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 ATG101Q9BSB4 218 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 YTHDF1Q9BYJ9 559 aaKnown RBP4.54□□□□□ -1.68
USP8-213ENST00000560885 FXYD6Q9H0Q3 95 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 FNDC4Q9H6D8 234 aaPredicted RBP4.54□□□□□ -1.68
USP8-213ENST00000560885 ANAPC10Q9UM13 185 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 HLA-DRB4X5D2U9 266 aa4.54□□□□□ -1.68
USP8-213ENST00000560885 IGHV3OR16-12A0A075B7B8 117 aa4.53□□□□□ -1.68
USP8-213ENST00000560885 A0A0B4J293 547 aa4.53□□□□□ -1.68
USP8-213ENST00000560885 BUB3O43684 328 aa4.53□□□□□ -1.68
USP8-213ENST00000560885 HSPA13P48723 471 aa4.53□□□□□ -1.68
USP8-213ENST00000560885 UCP3P55916 312 aa4.53□□□□□ -1.68
USP8-213ENST00000560885 YPEL3P61236 119 aaPredicted RBP4.53□□□□□ -1.68
USP8-213ENST00000560885 DAD1P61803 113 aa4.53□□□□□ -1.68
USP8-213ENST00000560885 TSPAN5P62079 268 aa4.53□□□□□ -1.68
USP8-213ENST00000560885 MXD1Q05195 221 aa4.53□□□□□ -1.68
USP8-213ENST00000560885 BSXQ3C1V8 233 aa4.53□□□□□ -1.68
USP8-213ENST00000560885 TIGITQ495A1 244 aa4.53□□□□□ -1.68
USP8-213ENST00000560885 SPINK9Q5DT21 86 aa4.53□□□□□ -1.68
USP8-213ENST00000560885 SPATA31B1PQ5VZV4 182 aa4.53□□□□□ -1.68
USP8-213ENST00000560885 GSG1LQ6UXU4 331 aa4.53□□□□□ -1.68
USP8-213ENST00000560885 SIGLEC15Q6ZMC9 328 aa4.53□□□□□ -1.68
USP8-213ENST00000560885 LYSMD2Q8IV50 215 aa4.53□□□□□ -1.68
USP8-213ENST00000560885 ZNRF2Q8NHG8 242 aa4.53□□□□□ -1.68
USP8-213ENST00000560885 PDCD10Q9BUL8 212 aa4.53□□□□□ -1.68
USP8-213ENST00000560885 SAV1Q9H4B6 383 aaPredicted RBP4.53□□□□□ -1.68
USP8-213ENST00000560885 MRPL36Q9P0J6 103 aaKnown RBP4.53□□□□□ -1.68
USP8-213ENST00000560885 LRP1BQ9NZR2 4599 aa4.53□□□□□ -1.68
USP8-213ENST00000560885 LOC102723971A0A1B0GUV8 181 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms