RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 NEURL2Q9BR09 285 aa11.44□□□□□ -0.58
SNRPA1-213ENST00000560856 IGHV3-49A0A0A0MS15 119 aa11.43□□□□□ -0.58
SNRPA1-213ENST00000560856 TRAV14DV4A0A0A6YYC5 116 aa11.43□□□□□ -0.58
SNRPA1-213ENST00000560856 PRSS46E5RG02 174 aa11.43□□□□□ -0.58
SNRPA1-213ENST00000560856 WRBO00258 174 aa11.43□□□□□ -0.58
SNRPA1-213ENST00000560856 TSPAN4O14817 238 aa11.43□□□□□ -0.58
SNRPA1-213ENST00000560856 APOHP02749 345 aaPredicted RBP11.43□□□□□ -0.58
SNRPA1-213ENST00000560856 IFNA4P05014 189 aa11.43□□□□□ -0.58
SNRPA1-213ENST00000560856 GPX4P36969 197 aaPredicted RBP11.43□□□□□ -0.58
SNRPA1-213ENST00000560856 CD81P60033 236 aa11.43□□□□□ -0.58
SNRPA1-213ENST00000560856 POLR2GP62487 172 aaKnown RBP eCLIP11.43□□□□□ -0.58
SNRPA1-213ENST00000560856 FAM90A2PQ658T7 463 aa11.43□□□□□ -0.58
SNRPA1-213ENST00000560856 ETFRF1Q6IPR1 90 aa11.43□□□□□ -0.58
SNRPA1-213ENST00000560856 GTSCR1Q86UQ5 136 aa11.43□□□□□ -0.58
SNRPA1-213ENST00000560856 LILRB2Q8N423 598 aa11.43□□□□□ -0.58
SNRPA1-213ENST00000560856 OR1S2Q8NGQ3 325 aa11.43□□□□□ -0.58
SNRPA1-213ENST00000560856 CIB3Q96Q77 187 aaPredicted RBP11.43□□□□□ -0.58
SNRPA1-213ENST00000560856 RNF2Q99496 336 aa11.43□□□□□ -0.58
SNRPA1-213ENST00000560856 RHPN1-AS1Q9BWJ2 59 aa11.43□□□□□ -0.58
SNRPA1-213ENST00000560856 VSIRQ9H7M9 311 aa11.43□□□□□ -0.58
SNRPA1-213ENST00000560856 STAB2Q8WWQ8 2551 aa11.42□□□□□ -0.58
SNRPA1-213ENST00000560856 IL5P05113 134 aa11.42□□□□□ -0.58
SNRPA1-213ENST00000560856 NHLRC4P0CG21 123 aaPredicted RBP11.42□□□□□ -0.58
SNRPA1-213ENST00000560856 OR10J1P30954 320 aa11.42□□□□□ -0.58
SNRPA1-213ENST00000560856 NKX2-1P43699 371 aaPredicted RBP11.42□□□□□ -0.58
SNRPA1-213ENST00000560856 PAX9P55771 341 aa11.42□□□□□ -0.58
SNRPA1-213ENST00000560856 YPEL3P61236 119 aaPredicted RBP11.42□□□□□ -0.58
SNRPA1-213ENST00000560856 GAMTQ14353 236 aa11.42□□□□□ -0.58
SNRPA1-213ENST00000560856 IAH1Q2TAA2 248 aaPredicted RBP11.42□□□□□ -0.58
SNRPA1-213ENST00000560856 LINC00322Q6ZN03 302 aaPredicted RBP11.42□□□□□ -0.58
SNRPA1-213ENST00000560856 ZBTB8BQ8NAP8 495 aaPredicted RBP11.42□□□□□ -0.58
SNRPA1-213ENST00000560856 ACY3Q96HD9 319 aa11.42□□□□□ -0.58
SNRPA1-213ENST00000560856 GINS3Q9BRX5 216 aa11.42□□□□□ -0.58
SNRPA1-213ENST00000560856 WFDC10AQ9H1F0 79 aa11.42□□□□□ -0.58
SNRPA1-213ENST00000560856 TENM3Q9P273 2699 aa11.41□□□□□ -0.58
SNRPA1-213ENST00000560856 IGKV1D-37A0A075B6S9 117 aa11.41□□□□□ -0.58
SNRPA1-213ENST00000560856 IGHV3OR16-13A0A075B7E8 117 aa11.41□□□□□ -0.58
SNRPA1-213ENST00000560856 IGHV3-74A0A0B4J1X5 117 aa11.41□□□□□ -0.58
SNRPA1-213ENST00000560856 CCSO14618 274 aa11.41□□□□□ -0.58
SNRPA1-213ENST00000560856 RBPMS2Q6ZRY4 209 aaKnown RBP11.41□□□□□ -0.58
SNRPA1-213ENST00000560856 NRARPQ7Z6K4 114 aa11.41□□□□□ -0.58
SNRPA1-213ENST00000560856 C12orf45Q8N5I9 185 aaPredicted RBP11.41□□□□□ -0.58
SNRPA1-213ENST00000560856 DEFB125Q8N687 156 aa11.41□□□□□ -0.58
SNRPA1-213ENST00000560856 ST8SIA2Q92186 375 aa11.41□□□□□ -0.58
SNRPA1-213ENST00000560856 SPAG8Q99932 426 aaPredicted RBP11.41□□□□□ -0.58
SNRPA1-213ENST00000560856 U3KQE9 123 aa11.41□□□□□ -0.58
SNRPA1-213ENST00000560856 PMS2P5A8MQ11 134 aa11.4□□□□□ -0.58
SNRPA1-213ENST00000560856 OR11H12B2RN74 326 aa11.4□□□□□ -0.58
SNRPA1-213ENST00000560856 CRYBB3P26998 211 aa11.4□□□□□ -0.58
SNRPA1-213ENST00000560856 RAB11AP62491 216 aa11.4□□□□□ -0.58
SNRPA1-213ENST00000560856 SPANXN5Q5MJ07 72 aa11.4□□□□□ -0.58
SNRPA1-213ENST00000560856 LAMTOR1Q6IAA8 161 aa11.4□□□□□ -0.58
SNRPA1-213ENST00000560856 SMIM8Q96KF7 97 aa11.4□□□□□ -0.58
SNRPA1-213ENST00000560856 IGKV1OR2-108A0A075B7D4 117 aa11.39□□□□□ -0.59
SNRPA1-213ENST00000560856 RBMY1BA6NDE4 496 aaKnown RBP11.39□□□□□ -0.59
SNRPA1-213ENST00000560856 RBMY1EA6NEQ0 496 aaKnown RBP11.39□□□□□ -0.59
SNRPA1-213ENST00000560856 H3BP45 60 aa11.39□□□□□ -0.59
SNRPA1-213ENST00000560856 TOMM40O96008 361 aa11.39□□□□□ -0.59
SNRPA1-213ENST00000560856 MBPP02686 304 aaPredicted RBP11.39□□□□□ -0.59
SNRPA1-213ENST00000560856 RBMY1DP0C7P1 496 aaKnown RBP11.39□□□□□ -0.59
SNRPA1-213ENST00000560856 IL15RAQ13261 267 aa11.39□□□□□ -0.59
SNRPA1-213ENST00000560856 ENKURQ8TC29 256 aa11.39□□□□□ -0.59
SNRPA1-213ENST00000560856 Q8WTZ3 238 aa11.39□□□□□ -0.59
SNRPA1-213ENST00000560856 GSKIPQ9P0R6 139 aa11.39□□□□□ -0.59
SNRPA1-213ENST00000560856 RCL1Q9Y2P8 373 aaKnown RBP11.39□□□□□ -0.59
SNRPA1-213ENST00000560856 STRAPQ9Y3F4 350 aaKnown RBP11.39□□□□□ -0.59
SNRPA1-213ENST00000560856 NBEAL2Q6ZNJ1 2754 aa11.38□□□□□ -0.59
SNRPA1-213ENST00000560856 IGHV3-66A0A0C4DH42 116 aa11.38□□□□□ -0.59
SNRPA1-213ENST00000560856 SSSCA1O60232 199 aa11.38□□□□□ -0.59
SNRPA1-213ENST00000560856 SCGB2A1O75556 95 aa11.38□□□□□ -0.59
SNRPA1-213ENST00000560856 PSG1P11464 419 aa11.38□□□□□ -0.59
SNRPA1-213ENST00000560856 NPPCP23582 126 aa11.38□□□□□ -0.59
SNRPA1-213ENST00000560856 RPP30P78346 268 aaKnown RBP11.38□□□□□ -0.59
SNRPA1-213ENST00000560856 USF2Q15853 346 aaPredicted RBP11.38□□□□□ -0.59
SNRPA1-213ENST00000560856 HAGHQ16775 308 aa11.38□□□□□ -0.59
SNRPA1-213ENST00000560856 TMEM14EPQ6UXP3 125 aa11.38□□□□□ -0.59
SNRPA1-213ENST00000560856 THAP8Q8NA92 274 aa11.38□□□□□ -0.59
SNRPA1-213ENST00000560856 SLC35E1Q96K37 410 aa11.38□□□□□ -0.59
SNRPA1-213ENST00000560856 CITED4Q96RK1 184 aa11.38□□□□□ -0.59
SNRPA1-213ENST00000560856 TM2D3Q9BRN9 247 aa11.38□□□□□ -0.59
SNRPA1-213ENST00000560856 C11orf1Q9H5F2 150 aa11.38□□□□□ -0.59
SNRPA1-213ENST00000560856 TUBA4BQ9H853 241 aa11.38□□□□□ -0.59
SNRPA1-213ENST00000560856 PSENENQ9NZ42 101 aa11.38□□□□□ -0.59
SNRPA1-213ENST00000560856 CCNKO75909 580 aa11.37□□□□□ -0.59
SNRPA1-213ENST00000560856 DFFBO76075 338 aa11.37□□□□□ -0.59
SNRPA1-213ENST00000560856 RD3LP0DJH9 198 aa11.37□□□□□ -0.59
SNRPA1-213ENST00000560856 ZNF90Q03938 601 aa11.37□□□□□ -0.59
SNRPA1-213ENST00000560856 ODF3L2Q3SX64 289 aa11.37□□□□□ -0.59
SNRPA1-213ENST00000560856 TCF24Q7RTU0 167 aa11.37□□□□□ -0.59
SNRPA1-213ENST00000560856 METTL26Q96S19 204 aa11.37□□□□□ -0.59
SNRPA1-213ENST00000560856 RAB40CQ96S21 281 aa11.37□□□□□ -0.59
SNRPA1-213ENST00000560856 MARVELD1Q9BSK0 173 aa11.37□□□□□ -0.59
SNRPA1-213ENST00000560856 SRD5A3Q9H8P0 318 aa11.37□□□□□ -0.59
SNRPA1-213ENST00000560856 PAIP2BQ9ULR5 123 aaKnown RBP11.37□□□□□ -0.59
SNRPA1-213ENST00000560856 U3KQK5 164 aa11.37□□□□□ -0.59
SNRPA1-213ENST00000560856 C7orf66A4D0T2 115 aa11.36□□□□□ -0.59
SNRPA1-213ENST00000560856 INMT-MINDY4F8WBC2 141 aa11.36□□□□□ -0.59
SNRPA1-213ENST00000560856 TAS2R30P59541 319 aa11.36□□□□□ -0.59
SNRPA1-213ENST00000560856 C2orf50Q96LR7 162 aa11.36□□□□□ -0.59
SNRPA1-213ENST00000560856 TRGV9Q99603 122 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms