RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 SULT1A1P50225 295 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 RPS23P62266 143 aaKnown RBP3.45□□□□□ -1.86
TMOD3-207ENST00000560549 EIF5AP63241 154 aaKnown RBP3.45□□□□□ -1.86
TMOD3-207ENST00000560549 DEFA5Q01523 94 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 TNFRSF9Q07011 255 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 USF2Q15853 346 aaPredicted RBP3.45□□□□□ -1.86
TMOD3-207ENST00000560549 CRYBG3Q68DQ2 2970 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 SSX7Q7RTT5 188 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 NFE4Q86UQ8 179 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 VKORC1L1Q8N0U8 176 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 PUSL1Q8N0Z8 303 aaKnown RBP3.45□□□□□ -1.86
TMOD3-207ENST00000560549 ZNF525Q8N782 197 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 OR2G3Q8NGZ4 309 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 RNASE11Q8TAA1 199 aaKnown RBP3.45□□□□□ -1.86
TMOD3-207ENST00000560549 YPEL2Q96QA6 119 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 ATP5SQ99766 215 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 RARRES2Q99969 163 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 SLC25A31Q9H0C2 315 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 VSIRQ9H7M9 311 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 UQCC1Q9NVA1 299 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 SIGLEC8Q9NYZ4 499 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 CLN8Q9UBY8 286 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 CSMD2Q7Z408 3487 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 CACNA1DQ01668 2161 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 A0A087WZ39 114 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 NKX6-3A6NJ46 265 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 RNF212BA8MTL3 300 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 SNURFLB1AK76 121 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 LYNX1G3V0Z9 82 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 TOR1AO14656 332 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 PPIHO43447 177 aaKnown RBP3.44□□□□□ -1.86
TMOD3-207ENST00000560549 ZG16O60844 167 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 CDK2AP2O75956 126 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 FBP1P09467 338 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 SFTA3P0C7M3 94 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 FRMD6-AS1P0C7T7 363 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 LYNX1P0DP58 116 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 CCL3L1P16619 93 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 COL8A2P25067 703 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 NFYBP25208 207 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 CA7P43166 264 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 TAS2R30P59541 319 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 UBE2KP61086 200 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 BAXQ07812 192 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 ZNF726P1Q15940 193 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 MRPL23Q16540 153 aaKnown RBP3.44□□□□□ -1.86
TMOD3-207ENST00000560549 LRRC75BQ2VPJ9 315 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 SPANXN5Q5MJ07 72 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 EIF5AL1Q6IS14 154 aaKnown RBP3.44□□□□□ -1.86
TMOD3-207ENST00000560549 TMEM14EPQ6UXP3 125 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 ZNF561Q8N587 486 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 OR10A7Q8NGE5 316 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 OR9G4Q8NGQ1 327 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 FAM213BQ8TBF2 198 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 RNASE6Q93091 150 aaKnown RBP3.44□□□□□ -1.86
TMOD3-207ENST00000560549 NARS2Q96I59 477 aaKnown RBP3.44□□□□□ -1.86
TMOD3-207ENST00000560549 HSD17B10Q99714 261 aaKnown RBP3.44□□□□□ -1.86
TMOD3-207ENST00000560549 RSG1Q9BU20 258 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 LINC00574Q9H8X3 128 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.44□□□□□ -1.86
TMOD3-207ENST00000560549 COA4Q9NYJ1 87 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 IDI2-AS1Q9NZ38 188 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 CTSZQ9UBR2 303 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 JPT1Q9UK76 154 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 CARHSP1Q9Y2V2 147 aaKnown RBP3.44□□□□□ -1.86
TMOD3-207ENST00000560549 FBXO7Q9Y3I1 522 aa3.44□□□□□ -1.86
TMOD3-207ENST00000560549 FN1P02751 2386 aaKnown RBP3.44□□□□□ -1.86
TMOD3-207ENST00000560549 IGLV9-49A0A0B4J1Y8 123 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 F8W036 122 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 CCL21O00585 134 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 ITGB1BP1O14713 200 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 IGKV1D-33P01593 117 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 IGKV1-33P01594 117 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 PRH1P02810 166 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 SAA2P0DJI9 122 aaPredicted RBP3.43□□□□□ -1.86
TMOD3-207ENST00000560549 CT45A6P0DMU7 189 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 CT45A5P0DMU8 189 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 CT45A7P0DMV0 189 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 VDAC2P45880 294 aaPredicted RBP3.43□□□□□ -1.86
TMOD3-207ENST00000560549 GNG10P50151 68 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 DLX6P56179 175 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 OR2B8PP59922 312 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 MRPS11P82912 194 aaKnown RBP3.43□□□□□ -1.86
TMOD3-207ENST00000560549 PRB3Q04118 309 aaPredicted RBP3.43□□□□□ -1.86
TMOD3-207ENST00000560549 TFF3Q07654 80 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 ZNF616Q08AN1 781 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 CATR1Q13166 79 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 DIAPH2-AS1Q14236 149 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 GUK1Q16774 197 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 CBLN2Q8IUK8 224 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 CACNG8Q8WXS5 425 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 CCL17Q92583 94 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 SEC11CQ9BY50 192 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 NKX6-2Q9C056 277 aaPredicted RBP3.43□□□□□ -1.86
TMOD3-207ENST00000560549 RPRMQ9NS64 109 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 TMEM106BQ9NUM4 274 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 RNF24Q9Y225 148 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 WSB1Q9Y6I7 421 aa3.43□□□□□ -1.86
TMOD3-207ENST00000560549 ATRQ13535 2644 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms