RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 RHPN1-AS1Q9BWJ2 59 aa11.32□□□□□ -0.6
SNRPA1-210ENST00000560383 RBKSQ9H477 322 aa11.32□□□□□ -0.6
SNRPA1-210ENST00000560383 VSIRQ9H7M9 311 aa11.32□□□□□ -0.6
SNRPA1-210ENST00000560383 SRD5A3Q9H8P0 318 aa11.32□□□□□ -0.6
SNRPA1-210ENST00000560383 PUS1Q9Y606 427 aaKnown RBP eCLIP11.32□□□□□ -0.6
SNRPA1-210ENST00000560383 CENPXA8MT69 81 aa11.31□□□□□ -0.6
SNRPA1-210ENST00000560383 FAM90A26D6RGX4 464 aa11.31□□□□□ -0.6
SNRPA1-210ENST00000560383 FAM90A2PQ658T7 463 aa11.31□□□□□ -0.6
SNRPA1-210ENST00000560383 OR1S1Q8NH92 325 aa11.31□□□□□ -0.6
SNRPA1-210ENST00000560383 C9orf170A2RU37 121 aa11.3□□□□□ -0.6
SNRPA1-210ENST00000560383 SCGB2A1O75556 95 aa11.3□□□□□ -0.6
SNRPA1-210ENST00000560383 IFNA10P01566 189 aa11.3□□□□□ -0.6
SNRPA1-210ENST00000560383 CD5P06127 495 aa11.3□□□□□ -0.6
SNRPA1-210ENST00000560383 IGLC1P0CG04 106 aa11.3□□□□□ -0.6
SNRPA1-210ENST00000560383 ZFAND6Q6FIF0 208 aa11.3□□□□□ -0.6
SNRPA1-210ENST00000560383 ETFRF1Q6IPR1 90 aa11.3□□□□□ -0.6
SNRPA1-210ENST00000560383 FLVCR2Q9UPI3 526 aa11.3□□□□□ -0.6
SNRPA1-210ENST00000560383 LINC00854A0A1B0GVQ3 168 aa11.29□□□□□ -0.6
SNRPA1-210ENST00000560383 OR4C46A6NHA9 309 aa11.29□□□□□ -0.6
SNRPA1-210ENST00000560383 A6NHS1 94 aa11.29□□□□□ -0.6
SNRPA1-210ENST00000560383 PLA2G10O15496 165 aa11.29□□□□□ -0.6
SNRPA1-210ENST00000560383 RND2P52198 227 aa11.29□□□□□ -0.6
SNRPA1-210ENST00000560383 YPEL3P61236 119 aaPredicted RBP11.29□□□□□ -0.6
SNRPA1-210ENST00000560383 DHRS2Q13268 280 aa11.29□□□□□ -0.6
SNRPA1-210ENST00000560383 CNPY1Q3B7I2 92 aa11.29□□□□□ -0.6
SNRPA1-210ENST00000560383 ODF3L2Q3SX64 289 aa11.29□□□□□ -0.6
SNRPA1-210ENST00000560383 OR1S2Q8NGQ3 325 aa11.29□□□□□ -0.6
SNRPA1-210ENST00000560383 IL17DQ8TAD2 202 aa11.29□□□□□ -0.6
SNRPA1-210ENST00000560383 HYDINQ4G0P3 5121 aa11.28□□□□□ -0.6
SNRPA1-210ENST00000560383 IGHV3-49A0A0A0MS15 119 aa11.28□□□□□ -0.6
SNRPA1-210ENST00000560383 APOHP02749 345 aaPredicted RBP11.28□□□□□ -0.6
SNRPA1-210ENST00000560383 HOXB5P09067 269 aa11.28□□□□□ -0.6
SNRPA1-210ENST00000560383 OR4E1P0C645 316 aa11.28□□□□□ -0.6
SNRPA1-210ENST00000560383 CRYBB3P26998 211 aa11.28□□□□□ -0.6
SNRPA1-210ENST00000560383 BMI1P35226 326 aa11.28□□□□□ -0.6
SNRPA1-210ENST00000560383 TIGITQ495A1 244 aa11.28□□□□□ -0.6
SNRPA1-210ENST00000560383 GGNBP1Q5YKI7 109 aa11.28□□□□□ -0.6
SNRPA1-210ENST00000560383 LYG2Q86SG7 212 aa11.28□□□□□ -0.6
SNRPA1-210ENST00000560383 ST8SIA2Q92186 375 aa11.28□□□□□ -0.6
SNRPA1-210ENST00000560383 CCDC32Q9BV29 185 aa11.28□□□□□ -0.6
SNRPA1-210ENST00000560383 BATF3Q9NR55 127 aa11.28□□□□□ -0.6
SNRPA1-210ENST00000560383 IGHV3OR16-13A0A075B7E8 117 aa11.27□□□□□ -0.61
SNRPA1-210ENST00000560383 IGHV3-74A0A0B4J1X5 117 aa11.27□□□□□ -0.61
SNRPA1-210ENST00000560383 MED6O75586 246 aa11.27□□□□□ -0.61
SNRPA1-210ENST00000560383 NPPCP23582 126 aa11.27□□□□□ -0.61
SNRPA1-210ENST00000560383 OR10J1P30954 320 aa11.27□□□□□ -0.61
SNRPA1-210ENST00000560383 GPX4P36969 197 aaPredicted RBP11.27□□□□□ -0.61
SNRPA1-210ENST00000560383 LILRB2Q8N423 598 aa11.27□□□□□ -0.61
SNRPA1-210ENST00000560383 COQ8AQ8NI60 647 aa11.27□□□□□ -0.61
SNRPA1-210ENST00000560383 NPIPB3Q92617 1050 aa11.27□□□□□ -0.61
SNRPA1-210ENST00000560383 U3KQE9 123 aa11.27□□□□□ -0.61
SNRPA1-210ENST00000560383 TRAV2A0A0B4J234 112 aa11.26□□□□□ -0.61
SNRPA1-210ENST00000560383 A0A1W2PS18 150 aa11.26□□□□□ -0.61
SNRPA1-210ENST00000560383 LYRM1O43325 122 aa11.26□□□□□ -0.61
SNRPA1-210ENST00000560383 SYNGR2O43760 224 aa11.26□□□□□ -0.61
SNRPA1-210ENST00000560383 ANXA7P20073 488 aaKnown RBP11.26□□□□□ -0.61
SNRPA1-210ENST00000560383 TCF24Q7RTU0 167 aa11.26□□□□□ -0.61
SNRPA1-210ENST00000560383 Q8WTZ3 238 aa11.26□□□□□ -0.61
SNRPA1-210ENST00000560383 CIB3Q96Q77 187 aaPredicted RBP11.26□□□□□ -0.61
SNRPA1-210ENST00000560383 METTL26Q96S19 204 aa11.26□□□□□ -0.61
SNRPA1-210ENST00000560383 GGTLC1Q9BX51 225 aa11.26□□□□□ -0.61
SNRPA1-210ENST00000560383 TMEM231Q9H6L2 316 aa11.26□□□□□ -0.61
SNRPA1-210ENST00000560383 RETNQ9HD89 108 aa11.26□□□□□ -0.61
SNRPA1-210ENST00000560383 EPPK1P58107 5090 aaKnown RBP11.26□□□□□ -0.61
SNRPA1-210ENST00000560383 LOC102724200A0A096LPH7 203 aaPredicted RBP11.25□□□□□ -0.61
SNRPA1-210ENST00000560383 ADAP1O75689 374 aa11.25□□□□□ -0.61
SNRPA1-210ENST00000560383 TOMM40O96008 361 aa11.25□□□□□ -0.61
SNRPA1-210ENST00000560383 IFNA4P05014 189 aa11.25□□□□□ -0.61
SNRPA1-210ENST00000560383 CMC4P56277 68 aaPredicted RBP11.25□□□□□ -0.61
SNRPA1-210ENST00000560383 ID3Q02535 119 aa11.25□□□□□ -0.61
SNRPA1-210ENST00000560383 ACY3Q96HD9 319 aa11.25□□□□□ -0.61
SNRPA1-210ENST00000560383 UBQLN2Q9UHD9 624 aa11.25□□□□□ -0.61
SNRPA1-210ENST00000560383 PLECQ15149 4684 aaKnown RBP11.24□□□□□ -0.61
SNRPA1-210ENST00000560383 MPTX1A8MV57 137 aa11.24□□□□□ -0.61
SNRPA1-210ENST00000560383 DFFBO76075 338 aa11.24□□□□□ -0.61
SNRPA1-210ENST00000560383 IAPPP10997 89 aa11.24□□□□□ -0.61
SNRPA1-210ENST00000560383 PAFAH1B2P68402 229 aa11.24□□□□□ -0.61
SNRPA1-210ENST00000560383 GAMTQ14353 236 aa11.24□□□□□ -0.61
SNRPA1-210ENST00000560383 C4orf46Q504U0 113 aa11.24□□□□□ -0.61
SNRPA1-210ENST00000560383 MITD1Q8WV92 249 aa11.24□□□□□ -0.61
SNRPA1-210ENST00000560383 S100ZQ8WXG8 99 aa11.24□□□□□ -0.61
SNRPA1-210ENST00000560383 C20orf85Q9H1P6 137 aa11.24□□□□□ -0.61
SNRPA1-210ENST00000560383 ALMS1Q8TCU4 4167 aa11.23□□□□□ -0.61
SNRPA1-210ENST00000560383 IGKV1D-37A0A075B6S9 117 aa11.23□□□□□ -0.61
SNRPA1-210ENST00000560383 IGHV3-66A0A0C4DH42 116 aa11.23□□□□□ -0.61
SNRPA1-210ENST00000560383 PRSS46E5RG02 174 aa11.23□□□□□ -0.61
SNRPA1-210ENST00000560383 IFNA21P01568 189 aa11.23□□□□□ -0.61
SNRPA1-210ENST00000560383 TCRBP04435 133 aa11.23□□□□□ -0.61
SNRPA1-210ENST00000560383 RD3LP0DJH9 198 aa11.23□□□□□ -0.61
SNRPA1-210ENST00000560383 RAB11AP62491 216 aa11.23□□□□□ -0.61
SNRPA1-210ENST00000560383 RPP30P78346 268 aaKnown RBP11.23□□□□□ -0.61
SNRPA1-210ENST00000560383 OR4D5Q8NGN0 318 aa11.23□□□□□ -0.61
SNRPA1-210ENST00000560383 MAGT1Q9H0U3 335 aa11.23□□□□□ -0.61
SNRPA1-210ENST00000560383 MS4A6AQ9H2W1 248 aa11.23□□□□□ -0.61
SNRPA1-210ENST00000560383 KIR2DL5BA0A0G2JN68 375 aa11.22□□□□□ -0.61
SNRPA1-210ENST00000560383 KIR2DL5BA0A0G2JPC4 375 aa11.22□□□□□ -0.61
SNRPA1-210ENST00000560383 WRBO00258 174 aa11.22□□□□□ -0.61
SNRPA1-210ENST00000560383 IL4P05112 153 aa11.22□□□□□ -0.61
SNRPA1-210ENST00000560383 HNRNPCP07910 306 aaKnown RBP eCLIP11.22□□□□□ -0.61
SNRPA1-210ENST00000560383 PSG1P11464 419 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms