RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 C9JQL5 133 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 CRYGCP07315 174 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 MFAP2P55001 183 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 BLCAPP62952 87 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 DLK1P80370 383 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 SLC25A24Q6NUK1 477 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 TTC9CQ8N5M4 171 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 HSD17B11Q8NBQ5 300 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 TMEM68Q96MH6 324 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 GINS3Q9BRX5 216 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 SCRT1Q9BWW7 348 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 WNT10AQ9GZT5 417 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 MXRA5Q9NR99 2828 aa8.84□□□□□ -0.99
USP3-218ENST00000560202 IGHG2P01859 326 aa8.84□□□□□ -0.99
USP3-218ENST00000560202 DEFA4P12838 97 aa8.84□□□□□ -0.99
USP3-218ENST00000560202 CD69Q07108 199 aa8.84□□□□□ -0.99
USP3-218ENST00000560202 SOHLH1Q5JUK2 328 aa8.84□□□□□ -0.99
USP3-218ENST00000560202 OR1L6Q8NGR2 347 aa8.84□□□□□ -0.99
USP3-218ENST00000560202 SCGB1C1Q8TD33 95 aa8.84□□□□□ -0.99
USP3-218ENST00000560202 PARD6GQ9BYG4 376 aaPredicted RBP8.84□□□□□ -0.99
USP3-218ENST00000560202 WDR61Q9GZS3 305 aaKnown RBP8.84□□□□□ -0.99
USP3-218ENST00000560202 EIF5A2Q9GZV4 153 aaKnown RBP8.84□□□□□ -0.99
USP3-218ENST00000560202 DOK5Q9P104 306 aa8.84□□□□□ -0.99
USP3-218ENST00000560202 ACANP16112 2415 aa8.84□□□□□ -0.99
USP3-218ENST00000560202 BAHCC1Q9P281 2608 aa8.84□□□□□ -0.99
USP3-218ENST00000560202 SMCO3A2RU48 225 aa8.83□□□□□ -1
USP3-218ENST00000560202 CORTO00230 105 aa8.83□□□□□ -1
USP3-218ENST00000560202 ATP6V0CP27449 155 aa8.83□□□□□ -1
USP3-218ENST00000560202 OPRK1P41145 380 aa8.83□□□□□ -1
USP3-218ENST00000560202 RPS10P46783 165 aaKnown RBP8.83□□□□□ -1
USP3-218ENST00000560202 SCGB2A2Q13296 93 aa8.83□□□□□ -1
USP3-218ENST00000560202 MLANAQ16655 118 aa8.83□□□□□ -1
USP3-218ENST00000560202 ECSCRQ19T08 205 aa8.83□□□□□ -1
USP3-218ENST00000560202 ARSJQ5FYB0 599 aaPredicted RBP8.83□□□□□ -1
USP3-218ENST00000560202 UNQ5815/PRO19632Q6UWF5 114 aa8.83□□□□□ -1
USP3-218ENST00000560202 SLC35E3Q7Z769 313 aa8.83□□□□□ -1
USP3-218ENST00000560202 TMEM86BQ8N661 226 aa8.83□□□□□ -1
USP3-218ENST00000560202 OR5T1Q8NG75 326 aa8.83□□□□□ -1
USP3-218ENST00000560202 CACNG8Q8WXS5 425 aa8.83□□□□□ -1
USP3-218ENST00000560202 TAF15Q92804 592 aaKnown RBP eCLIP8.83□□□□□ -1
USP3-218ENST00000560202 MISP3Q96FF7 219 aa8.83□□□□□ -1
USP3-218ENST00000560202 NEU1Q99519 415 aa8.83□□□□□ -1
USP3-218ENST00000560202 NPVFQ9HCQ7 196 aa8.83□□□□□ -1
USP3-218ENST00000560202 PLXNB1O43157 2135 aa8.83□□□□□ -1
USP3-218ENST00000560202 TLN2Q9Y4G6 2542 aa8.83□□□□□ -1
USP3-218ENST00000560202 A0A1B0GV90 55 aa8.82□□□□□ -1
USP3-218ENST00000560202 FNDC10F2Z333 226 aa8.82□□□□□ -1
USP3-218ENST00000560202 AGPAT2O15120 278 aa8.82□□□□□ -1
USP3-218ENST00000560202 IGF1P05019 195 aa8.82□□□□□ -1
USP3-218ENST00000560202 MDKP21741 143 aaPredicted RBP8.82□□□□□ -1
USP3-218ENST00000560202 CAMLGP49069 296 aa8.82□□□□□ -1
USP3-218ENST00000560202 CRIP2P52943 208 aaPredicted RBP8.82□□□□□ -1
USP3-218ENST00000560202 RUNX1Q01196 453 aa8.82□□□□□ -1
USP3-218ENST00000560202 AKIRIN2Q53H80 203 aa8.82□□□□□ -1
USP3-218ENST00000560202 Q6ZS46 218 aa8.82□□□□□ -1
USP3-218ENST00000560202 MRPL52Q86TS9 123 aaKnown RBP8.82□□□□□ -1
USP3-218ENST00000560202 FAM110DQ8TAY7 271 aaPredicted RBP8.82□□□□□ -1
USP3-218ENST00000560202 ISOC2Q96AB3 205 aa8.82□□□□□ -1
USP3-218ENST00000560202 GNPNAT1Q96EK6 184 aaPredicted RBP8.82□□□□□ -1
USP3-218ENST00000560202 SH3BGRL3Q9H299 93 aa8.82□□□□□ -1
USP3-218ENST00000560202 FNDC4Q9H6D8 234 aaPredicted RBP8.82□□□□□ -1
USP3-218ENST00000560202 TMEM242Q9NWH2 141 aa8.82□□□□□ -1
USP3-218ENST00000560202 CDC42EP3Q9UKI2 254 aa8.82□□□□□ -1
USP3-218ENST00000560202 WDR83OSQ9Y284 106 aa8.82□□□□□ -1
USP3-218ENST00000560202 G3V318 75 aa8.81□□□□□ -1
USP3-218ENST00000560202 PRH1P02810 166 aa8.81□□□□□ -1
USP3-218ENST00000560202 SRD5A1P18405 259 aa8.81□□□□□ -1
USP3-218ENST00000560202 FGF7P21781 194 aa8.81□□□□□ -1
USP3-218ENST00000560202 NDUFA6P56556 154 aa8.81□□□□□ -1
USP3-218ENST00000560202 GAMTQ14353 236 aa8.81□□□□□ -1
USP3-218ENST00000560202 ETFRF1Q6IPR1 90 aa8.81□□□□□ -1
USP3-218ENST00000560202 TREML4Q6UXN2 200 aa8.81□□□□□ -1
USP3-218ENST00000560202 HIST3H2BBQ8N257 126 aa8.81□□□□□ -1
USP3-218ENST00000560202 OR10G4Q8NGN3 311 aa8.81□□□□□ -1
USP3-218ENST00000560202 OR2T6Q8NHC8 308 aa8.81□□□□□ -1
USP3-218ENST00000560202 SLC35E1Q96K37 410 aa8.81□□□□□ -1
USP3-218ENST00000560202 FANCD2OSQ96PS1 177 aa8.81□□□□□ -1
USP3-218ENST00000560202 DUX5Q96PT3 197 aa8.81□□□□□ -1
USP3-218ENST00000560202 RFNGQ9Y644 331 aa8.81□□□□□ -1
USP3-218ENST00000560202 IGLV11-55A0A075B6I3 123 aa8.81□□□□□ -1
USP3-218ENST00000560202 TRAV41A0A0B4J266 112 aa8.81□□□□□ -1
USP3-218ENST00000560202 IFITM10A6NMD0 228 aa8.81□□□□□ -1
USP3-218ENST00000560202 CYB5BO43169 146 aa8.81□□□□□ -1
USP3-218ENST00000560202 MT-CO2P00403 227 aa8.81□□□□□ -1
USP3-218ENST00000560202 IGHV3-48P01763 117 aa8.81□□□□□ -1
USP3-218ENST00000560202 C19orf54Q5BKX5 351 aa8.81□□□□□ -1
USP3-218ENST00000560202 TMEM144Q7Z5S9 345 aa8.81□□□□□ -1
USP3-218ENST00000560202 OR10D4PQ8NGN7 298 aa8.81□□□□□ -1
USP3-218ENST00000560202 RCC1LQ96I51 464 aaKnown RBP8.81□□□□□ -1
USP3-218ENST00000560202 RSG1Q9BU20 258 aa8.81□□□□□ -1
USP3-218ENST00000560202 GSX1Q9H4S2 264 aaPredicted RBP8.81□□□□□ -1
USP3-218ENST00000560202 LINC00527Q9UJ94 153 aa8.81□□□□□ -1
USP3-218ENST00000560202 CBY1Q9Y3M2 126 aa8.81□□□□□ -1
USP3-218ENST00000560202 NAV3Q8IVL0 2385 aa8.81□□□□□ -1
USP3-218ENST00000560202 DNAJC9-AS1A6NH13 148 aa8.8□□□□□ -1
USP3-218ENST00000560202 I3L2K1 104 aa8.8□□□□□ -1
USP3-218ENST00000560202 TCAPO15273 167 aa8.8□□□□□ -1
USP3-218ENST00000560202 MPDU1O75352 247 aa8.8□□□□□ -1
USP3-218ENST00000560202 YIF1AO95070 293 aa8.8□□□□□ -1
USP3-218ENST00000560202 AKR1C3P42330 323 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms