RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 CNTFRP26992 372 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 GPX4P36969 197 aaPredicted RBP4.89□□□□□ -1.63
CLPX-206ENST00000560166 SNCAP37840 140 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 CX3CL1P78423 397 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 SSBP2P81877 361 aaPredicted RBP4.89□□□□□ -1.63
CLPX-206ENST00000560166 DEFA6Q01524 100 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 IFITM2Q01629 132 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 SLC38A11Q08AI6 406 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 FOXI1Q12951 378 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 EXOSC2Q13868 293 aaKnown RBP4.89□□□□□ -1.63
CLPX-206ENST00000560166 TNXAQ16473 311 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 RUSC1-AS1Q66K80 236 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 Q6YL49 198 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 C5orf56Q8N8D9 126 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 ZNF680Q8NEM1 530 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 OR5C1Q8NGR4 320 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 OR1P1Q8NH06 330 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 SSMEM1Q8WWF3 244 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 LINC00476Q8WZB0 136 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 ARPC1AQ92747 370 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 SSX3Q99909 188 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 RASL11BQ9BPW5 248 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 GINS3Q9BRX5 216 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 SLC25A33Q9BSK2 321 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 KCNIP2Q9NS61 270 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 UQCC1Q9NVA1 299 aa4.89□□□□□ -1.63
CLPX-206ENST00000560166 GAR1Q9NY12 217 aaKnown RBP4.89□□□□□ -1.63
CLPX-206ENST00000560166 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.89□□□□□ -1.63
CLPX-206ENST00000560166 IGHV3OR16-10A0A075B7F0 116 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 A0A1B0GW64 132 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 RPS10-NUDT3A0A1W2PQS6 291 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 NCBP2LA6PVI3 153 aaKnown RBP4.88□□□□□ -1.63
CLPX-206ENST00000560166 UMAD1C9J7I0 102 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 H3BP45 60 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 CNIH1O95406 144 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 CA2P00918 260 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 CRYGCP07315 174 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 METTL15P1P0C7V9 234 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 OR13C7P0DN81 318 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 SRD5A1P18405 259 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 MDKP21741 143 aaPredicted RBP4.88□□□□□ -1.63
CLPX-206ENST00000560166 IER3P46695 156 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 RAB5CP51148 216 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 WT1-ASQ06250 92 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 TMEM267Q0VDI3 215 aaPredicted RBP4.88□□□□□ -1.63
CLPX-206ENST00000560166 PJVKQ0ZLH3 352 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 HNF4GQ14541 408 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 FXYD3Q14802 87 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 C10orf55Q5SWW7 151 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 FAM120AOSQ5T036 256 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 RPL7L1Q6DKI1 246 aaKnown RBP4.88□□□□□ -1.63
CLPX-206ENST00000560166 ETFRF1Q6IPR1 90 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 IL17RELQ6ZVW7 336 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 CENPVQ7Z7K6 275 aaPredicted RBP4.88□□□□□ -1.63
CLPX-206ENST00000560166 HAPLN4Q86UW8 402 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 SGMS2Q8NHU3 365 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 SCARB1Q8WTV0 552 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 TMEM170AQ8WVE7 144 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 PSMG3Q9BT73 122 aaPredicted RBP4.88□□□□□ -1.63
CLPX-206ENST00000560166 HINT2Q9BX68 163 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 WFDC1Q9HC57 220 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 UBQLN2Q9UHD9 624 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 VPREB3Q9UKI3 123 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 TIMM9Q9Y5J7 89 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 F11RQ9Y624 299 aaKnown RBP4.88□□□□□ -1.63
CLPX-206ENST00000560166 DOCK11Q5JSL3 2073 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 TLN2Q9Y4G6 2542 aa4.88□□□□□ -1.63
CLPX-206ENST00000560166 MXRA5Q9NR99 2828 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 IGHV7-81A0A0B4J1V7 117 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 H3BUX3 64 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 CLDN34H7C241 214 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 TRIM77I1YAP6 450 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 FCN1O00602 326 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 IFNA4P05014 189 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 IGF1P05019 195 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 SPP1P10451 314 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 HIST1H1BP16401 226 aaKnown RBP4.87□□□□□ -1.63
CLPX-206ENST00000560166 CTRB1P17538 263 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 CD24P25063 80 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 SERF2P84101 59 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 ARL16Q0P5N6 197 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 CLINT1Q14677 625 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 NDUFA5Q16718 116 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 DEFB112Q30KQ8 113 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 AKIRIN2Q53H80 203 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 CTRB2Q6GPI1 263 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 DPPA3Q6W0C5 159 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 TTC9CQ8N5M4 171 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 TMEM217Q8N7C4 229 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 TMEM116Q8NCL8 245 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 OR10W1Q8NGF6 305 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 OR2G3Q8NGZ4 309 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 SCGB1C1Q8TD33 95 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 ZNF48Q96MX3 618 aaPredicted RBP4.87□□□□□ -1.63
CLPX-206ENST00000560166 ATP6V0BQ99437 205 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 P2RX4Q99571 388 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 WDR61Q9GZS3 305 aaKnown RBP4.87□□□□□ -1.63
CLPX-206ENST00000560166 PAIP2BQ9ULR5 123 aaKnown RBP4.87□□□□□ -1.63
CLPX-206ENST00000560166 WDR83OSQ9Y284 106 aa4.87□□□□□ -1.63
CLPX-206ENST00000560166 LSM4Q9Y4Z0 139 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms